Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895496_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1944895 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGCCATG | 194765 | 0.0 | 143.69186 | 1 |
GCCATGC | 194880 | 0.0 | 143.60707 | 2 |
CCATGCG | 61580 | 0.0 | 143.31453 | 3 |
CCATGCA | 47755 | 0.0 | 142.99477 | 3 |
CCATGCT | 54010 | 0.0 | 142.9529 | 3 |
CATGCGA | 16315 | 0.0 | 142.39932 | 4 |
CATGCGT | 20170 | 0.0 | 142.3292 | 4 |
CATGCGG | 20000 | 0.0 | 141.92014 | 4 |
CATGCTG | 18255 | 0.0 | 141.69157 | 4 |
CATGCAG | 15425 | 0.0 | 141.61314 | 4 |
CATGCAT | 15720 | 0.0 | 141.51874 | 4 |
CATGCTA | 15065 | 0.0 | 141.17645 | 4 |
CATGCTT | 16900 | 0.0 | 140.45027 | 4 |
CATGCCG | 9140 | 0.0 | 140.35637 | 4 |
CCATGCC | 32905 | 0.0 | 140.13782 | 3 |
CATGCAA | 13590 | 0.0 | 139.87508 | 4 |
CATGCGC | 5675 | 0.0 | 139.71489 | 4 |
ATGCGAT | 5805 | 0.0 | 139.06493 | 5 |
ATGCTAG | 4860 | 0.0 | 139.01328 | 5 |
ATGCGGT | 6175 | 0.0 | 139.00502 | 5 |