Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895486_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 237260 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AACTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | 377 | 0.158897412121723 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGATCG | 10 | 0.007247527 | 143.92097 | 8 |
CGACTGG | 10 | 0.007247527 | 143.92097 | 8 |
CGATCGG | 15 | 1.2659442E-4 | 143.92096 | 8 |
AACTCAC | 23780 | 0.0 | 143.5881 | 1 |
ACTCACC | 23815 | 0.0 | 143.37708 | 2 |
CTCACCG | 9350 | 0.0 | 142.9974 | 3 |
CTCACCT | 6865 | 0.0 | 142.97757 | 3 |
TCACCTG | 2515 | 0.0 | 142.77647 | 4 |
TCACCGA | 2180 | 0.0 | 142.2705 | 4 |
TCACCGT | 3035 | 0.0 | 141.78705 | 4 |
TCACCGG | 3485 | 0.0 | 141.64963 | 4 |
CTCACCA | 4375 | 0.0 | 141.28926 | 3 |
TCACCTA | 2055 | 0.0 | 140.76942 | 4 |
CACCGGT | 1405 | 0.0 | 139.82358 | 5 |
CACCGTG | 1005 | 0.0 | 139.62482 | 5 |
ACCGGTA | 450 | 0.0 | 139.1236 | 6 |
CACCGTA | 770 | 0.0 | 138.31366 | 5 |
TCACCAG | 1670 | 0.0 | 137.88834 | 4 |
CCGATTA | 110 | 0.0 | 137.3791 | 7 |
TCACCTT | 1945 | 0.0 | 137.26138 | 4 |