FastQCFastQC Report
Sat 18 Mar 2023
SRR4895468_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895468_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3062
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTA151.1453101E-4144.000025
CACACTA151.1453101E-4144.000024
CACACGT304.802132E-10144.000024
CACACGG450.0144.000024
CACACGC151.1453101E-4144.000024
CACACGA151.1453101E-4144.000024
CACATGT151.1453101E-4144.000026
CACACCT253.0124284E-8144.000024
CACACAT450.0144.000024
CACACAG151.1453101E-4144.000024
CACACAA151.1453101E-4144.000024
ACACCTG151.1453101E-4144.000025
ACACATA151.1453101E-4144.000025
CGACACA3050.0144.01
ACACGTC100.00689151144.05
ACACGGT201.8684641E-6144.05
ACACGGG100.00689151144.05
ACACGGC100.00689151144.05
ACACGAG100.00689151144.05
CACACTT100.00689151144.04