Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895452_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 486476 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ACACGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | 576 | 0.11840255223279257 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACACGAC | 48800 | 0.0 | 143.39867 | 1 |
CACGACC | 48870 | 0.0 | 143.19327 | 2 |
ACGACCT | 14030 | 0.0 | 143.13785 | 3 |
ACGACCG | 17185 | 0.0 | 142.93477 | 3 |
CGACCGT | 5455 | 0.0 | 142.66888 | 4 |
GACCGAT | 1735 | 0.0 | 142.61188 | 5 |
CGACCTA | 4145 | 0.0 | 142.29382 | 4 |
CGACCGA | 4295 | 0.0 | 142.1809 | 4 |
CGACCAT | 3630 | 0.0 | 141.87411 | 4 |
ACGACCA | 10785 | 0.0 | 141.85481 | 3 |
GACCTAT | 1425 | 0.0 | 141.83656 | 5 |
CGACCTG | 4815 | 0.0 | 141.01732 | 4 |
GACCGGT | 2000 | 0.0 | 140.61884 | 5 |
CGACCTT | 4260 | 0.0 | 140.30986 | 4 |
GACCGTA | 1550 | 0.0 | 140.14319 | 5 |
CGACCGG | 5890 | 0.0 | 139.94778 | 4 |
ACGACCC | 7170 | 0.0 | 139.94319 | 3 |
GACCTGA | 1260 | 0.0 | 139.8596 | 5 |
GACCTAG | 1395 | 0.0 | 139.7307 | 5 |
GACCGTT | 1960 | 0.0 | 139.08485 | 5 |