Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895448_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1120167 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGAGTA | 112095 | 0.0 | 143.80061 | 1 |
CGAGTAA | 112105 | 0.0 | 143.78778 | 2 |
GAGTAAT | 39040 | 0.0 | 143.1661 | 3 |
GAGTAAG | 35650 | 0.0 | 142.89418 | 3 |
GAGTAAC | 11375 | 0.0 | 142.51173 | 3 |
GAGTAAA | 27100 | 0.0 | 140.77037 | 3 |
AGTAACG | 3515 | 0.0 | 140.01404 | 4 |
AGTAATG | 13450 | 0.0 | 139.78415 | 4 |
AGTAATA | 11170 | 0.0 | 139.39426 | 4 |
AGTAAGA | 9920 | 0.0 | 138.53595 | 4 |
AGTAATC | 4285 | 0.0 | 138.53003 | 4 |
AGTAAGT | 11140 | 0.0 | 138.28412 | 4 |
AGTAAGG | 12925 | 0.0 | 137.83545 | 4 |
AGTAAGC | 2895 | 0.0 | 137.44133 | 4 |
AGTAATT | 11365 | 0.0 | 137.12915 | 4 |
AGTAAAT | 8815 | 0.0 | 137.04689 | 4 |
GTAATAG | 4020 | 0.0 | 136.92293 | 5 |
AGTAACC | 2890 | 0.0 | 136.18532 | 4 |
AGTAACT | 2790 | 0.0 | 135.13501 | 4 |
GTAACGT | 1225 | 0.0 | 135.09291 | 5 |