FastQCFastQC Report
Sat 18 Mar 2023
SRR4895444_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895444_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2381469
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTA2388250.0143.479782
TGGTAGC412950.0143.227434
GTGGTAG741350.0142.909323
GTGGTAT832100.0142.860583
GGTAGCC348350.0142.794885
TGGTATC410600.0142.750554
GGTATCC322150.0142.638845
TGGTAAC285050.0142.37514
GTGGTAA611550.0142.30133
GTATCCG114450.0142.25516
GTGGTAC216700.0142.229463
TGGTGGT2410700.0142.143621
GTAGCCT103450.0141.942216
TGGTACC155400.0141.389474
GTAGCCG119000.0141.108416
GGTAACC233950.0140.875765
GTATCCT99550.0140.565056
GTAACCG82550.0139.793296
GTAGCCA81150.0139.633976
TGGTATG159250.0139.552464
Produced by FastQC (version 0.11.5)