Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895443_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1835879 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGCTTCA | 184020 | 0.0 | 143.5754 | 2 |
TGGCTTC | 184310 | 0.0 | 143.3495 | 1 |
GCTTCAG | 57420 | 0.0 | 143.27647 | 3 |
GCTTCAT | 60390 | 0.0 | 143.11725 | 3 |
GCTTCAA | 48095 | 0.0 | 142.70372 | 3 |
CTTCATG | 19410 | 0.0 | 141.98782 | 4 |
GCTTCAC | 18975 | 0.0 | 141.64024 | 3 |
CTTCAGT | 18830 | 0.0 | 141.16415 | 4 |
CTTCAGG | 18480 | 0.0 | 140.52798 | 4 |
CTTCAGA | 16420 | 0.0 | 140.45357 | 4 |
CTTCAAT | 16450 | 0.0 | 139.75998 | 4 |
CTTCACG | 5325 | 0.0 | 139.18599 | 4 |
CTTCAAG | 15535 | 0.0 | 138.95938 | 4 |
CTTCATA | 17890 | 0.0 | 138.56602 | 4 |
CTTCATT | 18520 | 0.0 | 136.84415 | 4 |
TTCATAG | 5895 | 0.0 | 136.59164 | 5 |
CTTCAGC | 4950 | 0.0 | 134.4666 | 4 |
TTCAGTG | 6230 | 0.0 | 134.21342 | 5 |
TTCAGAG | 5410 | 0.0 | 133.6739 | 5 |
TTCATGA | 5250 | 0.0 | 133.63591 | 5 |