SRR4895438_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895438_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	183148
Sequences flagged as poor quality	0
Sequence length	150
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	974	0.531810339179243	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGTGGTGGCTCA	340	0.18564221285517724	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCCCTCTCAGCCCCTCCCT	263	0.14359971170856356	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGCAGGCCGTTTGGCATCTC	251	0.13704763360779262	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGCGGTGGCTCA	239	0.13049555550702163	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	231	0.126127503439841	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCAGTTGACACAAAATAGACT	206	0.1124773407299015	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	198	0.10810928866272086	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG	186	0.1015572105619499	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	3050	0.0	137.26431	7
GGTATCA	3055	0.0	136.80421	8
GTGGTAT	3060	0.0	136.11052	6
AGTGGTA	3080	0.0	135.22667	5
AAGCAGT	3095	0.0	134.80373	1
GTATCAA	3105	0.0	134.60124	9
CAGTGGT	3150	0.0	132.67838	4
AGCAGTG	3160	0.0	131.80322	2
GCAGTGG	3295	0.0	126.40309	3
GCAAGCT	40	0.006233299	53.95054	5
AGAGTAC	3010	0.0	28.252487	15-19
TCAACGC	3030	0.0	28.251328	10-14
ATCAACG	3020	0.0	28.249598	10-14
CAACGCA	3045	0.0	28.11216	10-14
TACATGG	3065	0.0	27.851572	20-24
GAGTACA	3000	0.0	27.783236	20-24
GTACATG	3070	0.0	27.759321	20-24
AGTACAT	3070	0.0	27.759321	20-24
CAGAGTA	3065	0.0	27.745508	15-19
CGCAGAG	3090	0.0	27.66073	15-19