Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895429_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1413712 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 32 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGGTA | 141485 | 0.0 | 143.87804 | 2 |
TCGGTAT | 52790 | 0.0 | 143.65413 | 3 |
GCTCGGT | 141730 | 0.0 | 143.62933 | 1 |
TCGGTAG | 46225 | 0.0 | 143.57454 | 3 |
TCGGTAA | 42610 | 0.0 | 143.52197 | 3 |
CGGTAGA | 12975 | 0.0 | 143.05177 | 4 |
CGGTAAT | 15815 | 0.0 | 142.94803 | 4 |
CGGTATA | 15195 | 0.0 | 142.85791 | 4 |
CGGTATG | 18245 | 0.0 | 142.81123 | 4 |
CGGTAGT | 16795 | 0.0 | 142.7519 | 4 |
CGGTAAG | 14350 | 0.0 | 142.74077 | 4 |
CGGTATT | 19605 | 0.0 | 142.56284 | 4 |
CGGTAGG | 16635 | 0.0 | 142.30713 | 4 |
CGGTAAA | 12710 | 0.0 | 141.446 | 4 |
GGTAGTA | 5410 | 0.0 | 135.74399 | 5 |
GGTATAG | 5390 | 0.0 | 135.31262 | 5 |
GGTAATA | 4695 | 0.0 | 134.94746 | 5 |
GGTATTA | 5875 | 0.0 | 134.5588 | 5 |
GGTATGA | 5290 | 0.0 | 133.7875 | 5 |
GGTATAA | 4650 | 0.0 | 132.69225 | 5 |