SRR4895420_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895420_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1303543
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6184	0.4743993869016979	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	4313	0.3308674896033349	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	3208	0.24609851765534396	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA	2930	0.22477202516526115	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2619	0.20091397061700306	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	2446	0.18764244831202345	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	2091	0.1604089776861983	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	1573	0.12067112477302244	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT	1558	0.11952041474657914	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT	1453	0.11146544456147592	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	30460	139.1985	1
GGTATCA	30670	137.94022	8
GTGGTAT	30670	137.91675	6
TGGTATC	30815	137.22105	7
GTATCAA	30955	137.06561	9
AGTGGTA	30925	136.75623	5
CAGTGGT	30925	136.73296	4
AGCAGTG	31120	135.92244	2
GCAGTGG	31290	135.11494	3
ATCAACG	30685	28.170534	10-14
TCAACGC	30835	28.061518	10-14
AGAGTAC	30770	28.04635	15-19
CAGAGTA	30910	27.896025	15-19
CAACGCA	31280	27.740562	10-14
TACATGG	30870	27.70064	20-24
GTACATG	31085	27.601702	20-24
GCAGAGT	31205	27.567703	15-19
AGTACAT	31330	27.491573	20-24
CGCAGAG	31450	27.417048	15-19
GAGTACA	30850	27.340487	20-24