SRR4895407_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895407_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1290969
Sequences flagged as poor quality	0
Sequence length	150
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7179	0.5560939108530104	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	3343	0.2589527711354804	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2249	0.17421022503251435	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	1699	0.1316065683993961	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	1673	0.1295925773585578	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTGAAAAAAAAAAAAAAAA	1660	0.12858558183813865	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	1487	0.115184795297176	No Hit
GAGGAGGCTACTGGCGTCGAGCCCACTGCCTCAGAAGACTTCCTTTCATC	1389	0.10759359829709311	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	32875	138.21231	1
GTGGTAT	32975	137.53114	6
GGTATCA	33125	137.03879	8
TGGTATC	33175	136.76714	7
GTATCAA	33285	136.66124	9
AGTGGTA	33250	136.43698	5
CAGTGGT	33360	135.92235	4
AGCAGTG	33445	135.53386	2
GCAGTGG	33885	133.73143	3
ATCAACG	33035	28.10138	10-14
CAACGCA	33250	27.988962	10-14
TCAACGC	33240	27.954062	10-14
AGAGTAC	33010	27.935305	15-19
CAGAGTA	33240	27.716019	15-19
TACATGG	33075	27.681858	20-24
CGCAGAG	33490	27.63811	15-19
GTACATG	33280	27.628172	20-24
AACGCAG	33780	27.558348	10-14
GCAGAGT	33450	27.533407	15-19
AGTACAT	33510	27.494408	20-24