SRR4895399_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4895399_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1100568
Sequences flagged as poor quality	0
Sequence length	150
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4958	0.4504946536697414	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	3403	0.30920397467489513	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	3027	0.27503979763176833	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2398	0.21788749082292053	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA	2308	0.20970989525408698	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCGGGGAGGTAGTGACGAAAA	2217	0.20144143751226637	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT	2033	0.18472279768265115	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT	1478	0.13429429167484425	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	1119	0.10167477157249712	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	25830	0.0	140.3796	1
GGTATCA	26275	0.0	137.52998	8
GTGGTAT	26285	0.0	137.25851	6
AGTGGTA	26450	0.0	136.51115	5
GTATCAA	26565	0.0	136.46227	9
AGCAGTG	26505	0.0	136.34274	2
TGGTATC	26485	0.0	136.2764	7
CAGTGGT	26595	0.0	135.79396	4
GCAGTGG	26920	0.0	134.21413	3
CGTGGTA	90	0.0037538535	31.999294	4
ATCAACG	26345	0.0	28.159864	10-14
AGAGTAC	26410	0.0	27.965408	15-19
TCAACGC	26595	0.0	27.954712	10-14
CAGAGTA	26470	0.0	27.880259	15-19
TACATGG	26365	0.0	27.817528	20-24
CAACGCA	26840	0.0	27.763918	10-14
GTACATG	26475	0.0	27.718266	20-24
GCAGAGT	26745	0.0	27.566664	15-19
AGTACAT	26745	0.0	27.54613	20-24
ACATGGG	26645	0.0	27.406305	20-24