FastQCFastQC Report
Sat 18 Mar 2023
SRR4895397_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895397_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2291236
Sequences flagged as poor quality0
Sequence length150
%GC30

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCACAT2294750.0143.77081
CACATAG806500.0143.618623
CCACATA2299250.0143.489432
ACATAGG288650.0142.67164
ACATAGT292250.0142.515444
CACATAT821450.0142.407183
ACATAAG237650.0142.236434
CATAGGT107200.0141.978735
CACATAA681650.0141.860023
ACATATG285150.0141.822174
ACATAGA231300.0141.565644
CATATGG103800.0141.219135
CATATAG88350.0140.163515
CATAGTG100700.0140.061265
CATAGAG79850.0140.02635
CATAAGG86000.0139.891435
CATAGGA81400.0139.571155
CATAAGT88700.0139.44815
CATAGGG104150.0139.361985
CATAGAT83250.0139.32355
Produced by FastQC (version 0.11.5)