FastQCFastQC Report
Sat 18 Mar 2023
SRR6792050_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792050_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100479798
Sequences flagged as poor quality0
Sequence length151
%GC32

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTTCA16617850.0143.32322
TGGCTTC17218800.0142.460141
GCTTCAT5714550.0142.07423
GCTTCAG6082550.0141.800783
TGGAACA7541650.0141.192321
AGTTAGC2222650.0140.642782
GCTTCAA4746000.0140.441443
ATCCGTC2649950.0139.73212
TCACGCA2000900.0139.624682
TAGCGAC1208250.0139.554242
CAGATTC2444500.0139.338412
ATAGCGA1235450.0138.238951
AGAGATC4622200.0138.23852
AACTCAC2794700.0138.032761
ACCTTAC2180850.0138.022452
AGCACCT1975000.0137.684161
CCTAATC1990950.0137.519711
ACTCACC2736350.0137.136982
CTTCAGT2055250.0137.116564
CTTCATG2054050.0136.71244
Produced by FastQC (version 0.11.5)