FastQCFastQC Report
Sat 18 Mar 2023
SRR6792046_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792046_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106192000
Sequences flagged as poor quality0
Sequence length151
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCAGC2822350.0141.406141
ACTTCGA2504500.0140.326432
ACCTTAC3861550.0140.144242
GGCTAAC3293950.0139.910642
AGTTAGC2809950.0139.76352
TAGCGAC1932750.0139.417972
ATCAGCA2799400.0139.391632
CACTTCG2593700.0139.37731
CGCATAC2039500.0139.139561
GATAGAC2769500.0138.647451
TCACGCA2234450.0138.4372
ATAGCGA1994800.0137.564971
GACTAGT2305300.0137.227871
CACCTTA4015950.0137.153181
CTGGCAT1612650.0136.771451
TCTGTCA2476850.0136.615252
CAGATTC2008450.0136.541442
CTTCACA3637650.0136.060912
TTCACGC2330050.0135.904451
GCATACA2050000.0135.69622
Produced by FastQC (version 0.11.5)