FastQCFastQC Report
Sat 18 Mar 2023
SRR6792043_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792043_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96603076
Sequences flagged as poor quality0
Sequence length151
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTGAT3407200.0141.328122
AACGTGA3421050.0139.568451
ATGCCTA1263400.0138.694981
AGTCACT1356350.0137.874361
ACGCTTA1164550.0137.610752
ACGTATC1025650.0137.48321
GTCACTA1319850.0137.410722
AACATCG2289000.0137.177172
CAAGCTA1277550.0136.614262
TGCCTAA1239000.0135.68042
GATAGAC1622100.0135.427371
TATCAGC1096550.0134.540821
CCGTCTA1533900.0134.532182
ACAAGCT1353550.0132.976971
GACTAGT1016250.0132.773931
CGAACTT785900.0132.706421
CTCAATG789450.0132.670781
CAGTTCA784350.0131.395032
AACGCTT1265950.0131.29121
CTAACGA872350.0131.136642
Produced by FastQC (version 0.11.5)