SRR6792040_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6792040_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	78899524
Sequences flagged as poor quality	0
Sequence length	151
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	7243243	9.180338020797185	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1029100	1.3043171211020232	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	653256	0.8279593676636122	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG	351290	0.4452371601126517	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC	276593	0.3505635851491322	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	204876	0.2596669657981714	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA	179822	0.22791265508775438	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG	133297	0.16894525244537598	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT	130161	0.16497057700880427	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	125270	0.1587715535520848	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	80625	0.1021869282760185	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTACC	52405	81.937965	145
AAGCAGT	5602165	64.838844	1
AGTGGTA	5670835	63.890057	5
GTATCAA	5712740	63.613533	9
AGCAGTG	5714865	63.402122	2
GTGGTAT	5745155	63.036694	6
CAGTGGT	5771075	62.785717	4
GGTATCA	5778255	62.737072	8
TGGTATC	5773845	62.73426	7
GCAGTGG	5826885	62.099823	3
AATAGGG	23685	43.67841	145
CCCTCTT	174245	37.682545	145
CGTGGGG	38440	37.040283	145
CAGGGGA	132350	32.449448	145
CGTGGGA	96650	28.353466	145
CCTCTTC	124965	28.165472	145
TGCGGAT	16465	27.563145	145
TGACTGG	58490	25.884842	2
GTGACTG	61105	24.908266	1
CACGGGA	84890	24.697783	145