FastQCFastQC Report
Sat 18 Mar 2023
SRR6792036_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792036_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136643865
Sequences flagged as poor quality0
Sequence length151
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC3070100.0139.378452
ACGCTTA2808200.0138.862632
ATAGCGA3130800.0138.688671
AGTTAGC2508950.0137.361372
GGCTAAC2358350.0136.453492
CCGAAGT3055250.0135.811751
TATCAGC1928800.0135.170731
TAAGGTC3109950.0134.853642
AACGCTT2953850.0134.620511
GATAGAC2130450.0134.150851
TCACGCA2102150.0134.034322
CAGATTC1963600.0133.901872
CCGTCTA4592650.0133.52452
CGAACTT1650250.0133.265091
ACGTATC1335700.0133.255861
ATCAGCA1907900.0133.038062
CAAGCTA1638850.0132.745762
ATCCGTC2199650.0132.437992
CGAAGTA3065900.0132.415252
GACTAGT2128950.0132.356751
Produced by FastQC (version 0.11.5)