##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064247_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 646052 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.768591382736993 32.0 32.0 32.0 32.0 32.0 2 31.334569043977883 32.0 32.0 32.0 32.0 32.0 3 31.43541541547739 32.0 32.0 32.0 32.0 32.0 4 31.542347984372775 32.0 32.0 32.0 32.0 32.0 5 31.474553131946035 32.0 32.0 32.0 32.0 32.0 6 34.9798003875849 36.0 36.0 36.0 36.0 36.0 7 35.017144130813 36.0 36.0 36.0 36.0 36.0 8 34.99598948691437 36.0 36.0 36.0 36.0 36.0 9 35.0759830478042 36.0 36.0 36.0 36.0 36.0 10 34.92322908991846 36.0 36.0 36.0 32.0 36.0 11 35.08588317968213 36.0 36.0 36.0 36.0 36.0 12 35.004496542074016 36.0 36.0 36.0 36.0 36.0 13 35.04211270919369 36.0 36.0 36.0 36.0 36.0 14 34.975785230910205 36.0 36.0 36.0 36.0 36.0 15 34.960761672435034 36.0 36.0 36.0 36.0 36.0 16 34.95905283166061 36.0 36.0 36.0 36.0 36.0 17 34.9245045290472 36.0 36.0 36.0 36.0 36.0 18 34.88932005473244 36.0 36.0 36.0 32.0 36.0 19 34.8930891011869 36.0 36.0 36.0 32.0 36.0 20 34.877872059834196 36.0 36.0 36.0 32.0 36.0 21 34.87252728882505 36.0 36.0 36.0 32.0 36.0 22 34.87953446471801 36.0 36.0 36.0 32.0 36.0 23 34.84104994644394 36.0 36.0 36.0 32.0 36.0 24 34.82669661265657 36.0 36.0 36.0 32.0 36.0 25 34.79557527877013 36.0 36.0 36.0 32.0 36.0 26 34.7317816522509 36.0 36.0 36.0 32.0 36.0 27 34.73382173571168 36.0 36.0 36.0 32.0 36.0 28 34.70836403261657 36.0 36.0 36.0 32.0 36.0 29 34.66142044293648 36.0 36.0 36.0 32.0 36.0 30 34.61465021391467 36.0 36.0 36.0 32.0 36.0 31 34.58139747264926 36.0 36.0 36.0 32.0 36.0 32 34.48829505984038 36.0 36.0 36.0 32.0 36.0 33 34.378960207537475 36.0 36.0 36.0 32.0 36.0 34 34.300023837090514 36.0 36.0 36.0 32.0 36.0 35 34.186333298248435 36.0 36.0 36.0 32.0 36.0 36 34.1432794883384 36.0 36.0 36.0 32.0 36.0 37 34.10785509525549 36.0 36.0 36.0 32.0 36.0 38 34.03784060725762 36.0 36.0 36.0 32.0 36.0 39 33.9846003108109 36.0 36.0 36.0 32.0 36.0 40 33.91307046491614 36.0 36.0 36.0 32.0 36.0 41 33.834555113210705 36.0 36.0 36.0 32.0 36.0 42 33.72270188777374 36.0 36.0 36.0 27.0 36.0 43 33.63917145988248 36.0 36.0 36.0 27.0 36.0 44 33.5179366366794 36.0 36.0 36.0 21.0 36.0 45 33.348208812912894 36.0 36.0 36.0 21.0 36.0 46 33.21581389733334 36.0 36.0 36.0 14.0 36.0 47 33.04302130478661 36.0 36.0 36.0 14.0 36.0 48 32.87750521629838 36.0 36.0 36.0 14.0 36.0 49 32.76170029657055 36.0 36.0 36.0 14.0 36.0 50 32.20641836880004 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 14.0 21 52.0 22 192.0 23 510.0 24 1227.0 25 2465.0 26 4781.0 27 8307.0 28 13286.0 29 17639.0 30 22862.0 31 29124.0 32 38807.0 33 56235.0 34 103298.0 35 347246.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.582664720297096 18.28947551738497 12.575910735322118 23.551949026995818 2 15.255855998093018 21.787424134776572 38.056519107742936 24.900200759387474 3 18.276885261380293 28.190344105960673 28.524528249317775 25.008242383341255 4 11.721657080235028 16.194052491130744 35.338022326376205 36.74626810225802 5 13.005764241887649 38.7145307188895 31.68042200937386 16.59928302984899 6 31.20099063539974 35.95201609782524 17.999071279312748 14.84792198746227 7 28.088760657036893 32.20127791570957 21.375369165330348 18.334592261923188 8 29.326741500684157 30.34631887216509 19.858772978026536 20.46816664912422 9 29.09710903386286 13.195324798350585 19.831064922521115 37.87650124526544 10 17.200088538175898 26.686056320805392 30.251420557883378 25.862434583135336 11 35.12163107613628 22.5142867756775 23.09303275897296 19.271049389213253 12 26.17239196286361 24.809651250443075 28.69030463539256 20.32765215130075 13 29.84753502050925 20.53401439517065 26.87470010061141 22.74375048370869 14 24.6643066878621 19.584986324609048 27.944852650951706 27.805854336577145 15 24.362830310469782 26.61662701367293 26.28026023921823 22.740282436639056 16 23.229759055912773 26.429396231204784 26.413762572711992 23.92708214017045 17 21.598759231082376 25.624447605529593 27.341804284801047 25.434988878586985 18 22.24791694721901 24.35550354695556 30.550563658681178 22.846015847144248 19 23.912935800833367 23.64747729284949 30.603883278745364 21.835703627571775 20 25.44474593796388 22.15069275574536 29.681770408471266 22.722790897819493 21 26.720449747079183 22.268640914353643 28.780810213419354 22.23009912514782 22 25.215926891333822 22.856209716864896 29.218855448168256 22.70900794363302 23 23.127466914325517 23.602662332636793 30.210510022444083 23.059360730593607 24 23.115703118953643 24.26112529989939 29.988855351752957 22.63431622939401 25 23.371891257675596 24.350621709767648 29.95568392718109 22.321803105375665 26 22.853410070695173 24.99144754052937 30.174470173200852 21.98067221557461 27 22.876771066656968 24.818539679787744 29.71893580429994 22.58575344925535 28 22.023243790459148 25.114934166328702 30.206556433062655 22.6552656101495 29 21.813813888188026 24.97062834446025 30.137253475452418 23.078304291899304 30 21.88919262811483 25.61027333434465 29.848673884171127 22.65186015336939 31 22.454899799692264 25.671588189583378 28.82078494626985 23.05272706445451 32 22.307151724543594 25.740295282233223 28.74450873494256 23.208044258280626 33 22.330215811747514 25.40687216923158 28.985520706596944 23.27739131242396 34 22.98059538846373 25.34564851276717 28.902747851499615 22.771008247269485 35 23.24262073299661 25.685684787000046 28.669433295203184 22.402261184800157 36 22.54532113727378 26.705221818542075 28.13664375132546 22.61281329285868 37 23.160760833895743 26.871590705046838 27.880060926151806 22.08758753490561 38 22.398468120940425 27.053238060445445 28.267317230233868 22.28097658838026 39 22.68596416547347 27.04415463797841 27.860376920397815 22.409504276150304 40 22.76426036199053 27.472799629743715 27.87556169209599 21.887378316169766 41 22.09219709951101 27.780486634500928 27.884661524482645 22.24265474150541 42 22.99491977202438 28.089388484197425 27.14067680648387 21.77501493729432 43 22.321424425309154 27.53500927956808 27.17543569081315 22.968130604309618 44 21.916188241339974 27.923683098493445 26.7282518346302 23.431876825536378 45 22.44375787482625 27.99166003659182 26.456939598728262 23.107642489853664 46 22.52694862888596 27.957228919392485 26.138157772535614 23.37766467918594 47 22.75662656570222 27.854639679522503 26.01464933842696 23.374084416348314 48 23.330407822413747 28.669852223001325 24.877523253168143 23.122216701416782 49 22.74529835152078 28.35322343471868 25.04852565590899 23.85295255785156 50 22.39560276266868 29.03820494642763 25.229783822104444 23.33640846879924 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 143.0 1 98.5 2 54.0 3 186.0 4 318.0 5 410.5 6 503.0 7 532.5 8 562.0 9 816.5 10 1071.0 11 1646.5 12 2222.0 13 3819.5 14 5417.0 15 7695.0 16 9973.0 17 11333.5 18 12694.0 19 12681.5 20 12669.0 21 12455.5 22 12242.0 23 12239.0 24 12236.0 25 9638.0 26 7040.0 27 6775.0 28 6510.0 29 7376.5 30 8243.0 31 10318.5 32 12394.0 33 14827.5 34 17261.0 35 18409.5 36 19558.0 37 20717.0 38 21876.0 39 23222.5 40 24569.0 41 26611.5 42 28654.0 43 29780.0 44 30906.0 45 34007.0 46 37108.0 47 39270.0 48 41432.0 49 42916.0 50 44400.0 51 43068.0 52 41736.0 53 40928.0 54 40120.0 55 40074.0 56 40028.0 57 39199.0 58 38370.0 59 35095.5 60 31821.0 61 27765.0 62 23709.0 63 20961.0 64 18213.0 65 15791.0 66 13369.0 67 11434.5 68 9500.0 69 8456.5 70 7413.0 71 5812.5 72 4212.0 73 3567.5 74 2923.0 75 2322.0 76 1721.0 77 1431.0 78 1141.0 79 941.0 80 741.0 81 591.5 82 442.0 83 364.0 84 286.0 85 194.0 86 102.0 87 83.0 88 64.0 89 45.5 90 27.0 91 23.0 92 19.0 93 16.5 94 14.0 95 15.0 96 16.0 97 11.0 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009751537027979172 2 7.739315101570771E-4 3 1.5478630203141544E-4 4 0.0 5 0.0 6 3.095726040628309E-4 7 0.0 8 0.0 9 7.739315101570771E-4 10 4.643589060942463E-4 11 0.0 12 1.5478630203141544E-4 13 3.095726040628309E-4 14 1.5478630203141544E-4 15 0.004798375362973879 16 0.0015478630203141542 17 1.5478630203141544E-4 18 7.739315101570771E-4 19 0.0 20 0.0013930767182827389 21 0.0 22 0.0 23 3.095726040628309E-4 24 3.095726040628309E-4 25 0.0017026493223455698 26 0.006036665779225202 27 0.006655810987350863 28 0.004643589060942463 29 0.003250512342659724 30 0.004643589060942463 31 0.0071201698934451095 32 0.0040244438528168015 33 0.0040244438528168015 34 0.0030957260406283085 35 0.0029409397385968933 36 0.007894101403602187 37 0.0037148712487539703 38 0.007429742497507941 39 0.004179230154848217 40 0.0020122219264084007 41 0.0035600849467225548 42 0.0027861534365654778 43 0.0013930767182827389 44 0.0013930767182827389 45 9.287178121884926E-4 46 0.0012382904162513235 47 0.002476580832502647 48 0.0017026493223455698 49 3.095726040628309E-4 50 0.0015478630203141542 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 646052.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.167759312763096 #Duplication Level Percentage of deduplicated Percentage of total 1 72.69451069650644 37.196152266779244 2 14.675340167770553 15.01808547074816 3 5.5621338756692955 8.53805782246838 4 2.6091019165515306 5.340075955543105 5 1.3586914223596627 3.4760597839807477 6 0.7803340797667497 2.3956767826230916 7 0.5106841234661541 1.8291393620055896 8 0.33092753276333703 1.354625627712076 9 0.23088461421595427 1.0632463532299896 >10 1.0733127849606716 9.750665433605086 >50 0.09677808172426865 3.471325091518636 >100 0.07151836810106414 7.095410196565472 >500 0.0033476682940905876 1.1914184881796779 >1k 0.0024346678502476997 2.2800613650407584 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3246 0.5024363363939746 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2292 0.35477020425600414 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 2256 0.3491978973828732 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1669 0.2583383380904324 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1418 0.21948697628054706 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1312 0.20307962826521703 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 1253 0.19394723644536352 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1196 0.18512441722957287 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 971 0.15029749927250438 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 968 0.14983314036641013 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 956 0.14797570474203314 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 768 0.11887587996012705 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 1.5478630203141544E-4 0.0 14 0.0 0.0 0.0 1.5478630203141544E-4 0.0 15 0.0 0.0 0.0 1.5478630203141544E-4 0.0 16 0.0 0.0 0.0 1.5478630203141544E-4 0.0 17 0.0 0.0 0.0 1.5478630203141544E-4 0.0 18 0.0 0.0 0.0 4.643589060942463E-4 0.0 19 0.0 0.0 0.0 4.643589060942463E-4 0.0 20 0.0 0.0 0.0 9.287178121884926E-4 0.0 21 0.0 0.0 0.0 0.0013930767182827389 0.0 22 0.0 0.0 0.0 0.002631367134534062 0.0 23 0.0 0.0 0.0 0.006810597289382279 0.0 24 0.0 0.0 0.0 0.012073331558450404 0.0 25 0.0 0.0 0.0 0.015788202807204374 0.0 26 0.0 0.0 0.0 0.020896150774241083 0.0 27 0.0 0.0 0.0 0.02646845764737204 0.0 28 0.0 0.0 0.0 0.04024443852816801 0.0 29 0.0 0.0 0.0 0.0682607591958542 0.0 30 0.0 0.0 0.0 0.12228117860481819 0.0 31 0.0 0.0 0.0 0.2117476611789763 0.0 32 0.0 0.0 0.0 0.2931652560475008 0.0 33 0.0 0.0 0.0 0.36452174128398335 0.0 34 0.0 0.0 0.0 0.43618779912452865 0.0 35 0.0 0.0 0.0 0.5261186406047811 0.0 36 0.0 0.0 0.0 0.6377195643694316 0.0 37 0.0 0.0 0.0 0.7895649266622501 0.0 38 0.0 0.0 0.0 0.983666949409645 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTGTA 20 7.852965E-4 44.001083 33 CGTCGTA 145 0.0 27.313133 10 TACCGTC 150 0.0 26.398605 7 ATACCGT 160 0.0 24.748695 6 CGGATAC 45 0.0013973094 24.445047 25 TAGGACG 110 2.0190782E-10 23.998734 4 CCGTCGT 175 0.0 23.888151 9 ACCGTCG 185 0.0 23.782528 8 TCGCACG 125 4.0017767E-11 22.880564 22 CCGATCG 125 4.0017767E-11 22.878794 18 GAGTAAT 70 3.2136755E-5 21.998838 1 GTATAGC 60 2.8717984E-4 21.998838 1 GTCTTAC 60 2.8717984E-4 21.998838 1 TCTAGAT 135 1.1277734E-10 21.184067 2 AGGACGT 125 9.949872E-10 21.118885 5 GTGTAAG 75 5.4698052E-5 20.53225 1 AGATACC 215 0.0 20.464037 4 CCGTGAC 65 4.9305E-4 20.30662 29 GTCGTAG 185 0.0 20.218279 11 TCGTACA 55 0.0044807526 20.000492 35 >>END_MODULE