##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064246_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1267012 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29566176168813 32.0 32.0 32.0 32.0 32.0 2 31.39599467092656 32.0 32.0 32.0 32.0 32.0 3 31.47357325739614 32.0 32.0 32.0 32.0 32.0 4 31.55989998516194 32.0 32.0 32.0 32.0 32.0 5 31.507588720548817 32.0 32.0 32.0 32.0 32.0 6 35.090416665351235 36.0 36.0 36.0 36.0 36.0 7 35.109583808203865 36.0 36.0 36.0 36.0 36.0 8 35.05468614346194 36.0 36.0 36.0 36.0 36.0 9 35.154989060877085 36.0 36.0 36.0 36.0 36.0 10 35.019879054026326 36.0 36.0 36.0 36.0 36.0 11 35.15924158571505 36.0 36.0 36.0 36.0 36.0 12 35.06581310989951 36.0 36.0 36.0 36.0 36.0 13 35.10682377120343 36.0 36.0 36.0 36.0 36.0 14 35.05086928932007 36.0 36.0 36.0 36.0 36.0 15 35.0266437886934 36.0 36.0 36.0 36.0 36.0 16 35.0362411721436 36.0 36.0 36.0 36.0 36.0 17 34.995749842937556 36.0 36.0 36.0 36.0 36.0 18 34.996368621607374 36.0 36.0 36.0 36.0 36.0 19 34.98960783323283 36.0 36.0 36.0 36.0 36.0 20 34.98303488838306 36.0 36.0 36.0 36.0 36.0 21 34.97186056643505 36.0 36.0 36.0 36.0 36.0 22 34.96009587912348 36.0 36.0 36.0 36.0 36.0 23 34.90832525658794 36.0 36.0 36.0 32.0 36.0 24 34.878844083560374 36.0 36.0 36.0 32.0 36.0 25 34.84942999750594 36.0 36.0 36.0 32.0 36.0 26 34.792110887663256 36.0 36.0 36.0 32.0 36.0 27 34.7808150199051 36.0 36.0 36.0 32.0 36.0 28 34.75578210782534 36.0 36.0 36.0 32.0 36.0 29 34.73169314892045 36.0 36.0 36.0 32.0 36.0 30 34.70993487038797 36.0 36.0 36.0 32.0 36.0 31 34.68902346623394 36.0 36.0 36.0 32.0 36.0 32 34.650483973316746 36.0 36.0 36.0 32.0 36.0 33 34.63275485946463 36.0 36.0 36.0 32.0 36.0 34 34.62145346689692 36.0 36.0 36.0 32.0 36.0 35 34.57390774515159 36.0 36.0 36.0 32.0 36.0 36 34.54038162227351 36.0 36.0 36.0 32.0 36.0 37 34.533657929048815 36.0 36.0 36.0 32.0 36.0 38 34.4816023841921 36.0 36.0 36.0 32.0 36.0 39 34.47255906021411 36.0 36.0 36.0 32.0 36.0 40 34.45806432772539 36.0 36.0 36.0 32.0 36.0 41 34.42899751541422 36.0 36.0 36.0 32.0 36.0 42 34.37588041786503 36.0 36.0 36.0 32.0 36.0 43 34.36390815556601 36.0 36.0 36.0 32.0 36.0 44 34.29713372880446 36.0 36.0 36.0 32.0 36.0 45 34.2629604139503 36.0 36.0 36.0 32.0 36.0 46 34.22473031036802 36.0 36.0 36.0 32.0 36.0 47 34.19374165359128 36.0 36.0 36.0 32.0 36.0 48 34.132080832699295 36.0 36.0 36.0 32.0 36.0 49 34.11313783926277 36.0 36.0 36.0 32.0 36.0 50 33.52811338803421 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 10.0 21 52.0 22 147.0 23 397.0 24 1072.0 25 2555.0 26 5196.0 27 9283.0 28 15500.0 29 23231.0 30 33181.0 31 46904.0 32 66438.0 33 106505.0 34 217710.0 35 738827.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.57844584386451 18.02539163326424 11.931415436736408 26.46474708613485 2 15.582550056945227 20.67565530419327 37.49521510141617 26.246579537445335 3 18.257120915669763 24.649271866690555 28.92304462406285 28.170562593576832 4 12.113855275246012 16.092902040391095 36.55261355062146 35.24062913374143 5 13.930649433470244 37.317878599413426 33.51388937121354 15.237582595902802 6 33.53743622771127 36.31902876698489 16.800525332121026 13.343009673182808 7 29.575962974304897 30.691422022837983 21.13989449192273 18.592720510934388 8 27.708814123307434 33.42738663880058 19.61449457463702 19.249304663254964 9 27.647443243704007 13.724589501466461 18.544809928365993 40.08315732646354 10 15.531207403998923 26.87509224611698 32.11064640553879 25.4830539443453 11 37.326639368845754 20.89490865122035 22.922198053372817 18.856253926561077 12 24.740669181246254 23.441311874956096 29.380013275338573 22.438005668459073 13 29.675810276991804 19.538754779973246 25.472354094893074 25.31308084814188 14 23.385608637658738 19.74183313470296 25.452285301615614 31.420272926022687 15 24.93573163329658 27.72881077672179 22.43587567968188 24.89958191029975 16 25.268151847741844 25.69017037014821 24.456711333647984 24.584966448461966 17 23.651078284972833 25.81909247899783 25.62943365966542 24.900395576363916 18 24.387868417459412 24.924803098956833 26.90663903198641 23.780689451597347 19 25.540326374177987 24.59297938772482 25.630222918172834 24.23647131992436 20 25.797965750673047 24.19007689800261 25.372631319736417 24.639326031587927 21 26.717584363841855 24.049022424412712 24.68832181542085 24.54507139632458 22 25.692497600646565 24.498266782845885 25.22296623225741 24.58626938425014 23 24.32253461320503 24.244002771897755 25.69790734347696 25.735555271420253 24 24.74530547557711 24.85264497146032 25.660927160680913 24.74112239228166 25 24.756805307701963 24.463037958498457 25.871968896336117 24.908187837463466 26 24.243890426269154 25.43399639763652 26.215876604054163 24.106236572040167 27 24.858614361544685 24.893028395524595 25.46054423111076 24.78781301181996 28 24.217728848448875 24.891392886234048 25.925528354665374 24.965349910651703 29 24.299120743816 24.74798339358159 25.701352823248985 25.251543039353425 30 24.133968240437518 25.266998011771513 25.880594211168965 24.718439536622 31 25.04583919067288 24.716933624536182 25.069755290154383 25.167471894636556 32 24.481418192294182 25.2425284044942 25.08119798100184 25.194855422209766 33 24.2716615139085 24.683434901997618 25.617166774931157 25.427736809162727 34 24.90796926204924 24.891315329195372 25.801361991778798 24.399353416976595 35 25.356734968353805 24.736123860180573 25.692336956393053 24.214804215072572 36 24.372172249287242 25.309493664891214 25.354011498861794 24.964322586959746 37 25.09270236266711 25.025217884097184 25.289551824133085 24.592527929102623 38 24.62091343858012 24.972867418564764 25.511809283407803 24.894409859447308 39 25.317335909591034 24.54903650803423 25.12024903824448 25.013378544130255 40 25.556342202448185 24.970382349853708 25.437713746299274 24.035561701398837 41 24.463243570051823 25.032479269307206 26.126040086443002 24.378237074197965 42 25.54816885044961 25.598524377836938 25.25905866734649 23.59424810436696 43 24.556982206675336 24.76179802240267 25.732838092111077 24.948381678810915 44 24.17205998421468 25.39865824782952 25.13954222573007 25.289739542225732 45 24.444689994830288 25.522279093445515 25.199468032628385 24.833562879095812 46 24.38782798805056 24.976854866397527 25.220973871452756 25.414343274099156 47 24.70206876629358 24.996704780712037 25.617468845378838 24.683757607615547 48 25.205112278007146 25.36509788167064 24.656330875800816 24.773458964521396 49 24.561191655005363 25.501120353335526 24.97428988382895 24.963398107830162 50 24.64269816163587 25.957698366845673 24.5888700516813 24.81073341983716 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 86.0 1 66.5 2 47.0 3 145.0 4 243.0 5 279.5 6 316.0 7 277.5 8 239.0 9 353.0 10 467.0 11 705.0 12 943.0 13 1601.5 14 2260.0 15 2992.0 16 3724.0 17 3840.0 18 3956.0 19 3962.5 20 3969.0 21 4424.5 22 4880.0 23 5512.5 24 6145.0 25 6993.0 26 7841.0 27 10345.5 28 12850.0 29 15032.0 30 17214.0 31 19793.0 32 22372.0 33 26369.5 34 30367.0 35 35465.5 36 40564.0 37 45733.5 38 50903.0 39 54197.0 40 57491.0 41 61396.5 42 65302.0 43 66295.0 44 67288.0 45 73864.5 46 80441.0 47 85272.0 48 90103.0 49 93503.5 50 96904.0 51 94005.5 52 91107.0 53 90291.0 54 89475.0 55 89530.0 56 89585.0 57 86399.0 58 83213.0 59 76075.0 60 68937.0 61 60967.5 62 52998.0 63 46229.5 64 39461.0 65 33644.0 66 27827.0 67 23656.5 68 19486.0 69 17194.0 70 14902.0 71 11605.5 72 8309.0 73 7021.0 74 5733.0 75 4429.5 76 3126.0 77 2722.5 78 2319.0 79 1932.5 80 1546.0 81 1251.0 82 956.0 83 762.5 84 569.0 85 429.5 86 290.0 87 190.5 88 91.0 89 73.5 90 56.0 91 46.5 92 37.0 93 27.5 94 18.0 95 24.0 96 30.0 97 20.0 98 10.0 99 13.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01089176740236083 2 3.946292537087257E-4 3 3.946292537087257E-4 4 0.0 5 0.0 6 3.157034029669806E-4 7 0.0 8 0.0 9 0.0012628136118679224 10 0.0016574428655766482 11 0.0 12 7.892585074174515E-5 13 5.524809551922161E-4 14 1.578517014834903E-4 15 0.004656625193762963 16 4.7355510445047086E-4 17 0.0 18 3.946292537087257E-4 19 0.0 20 7.103326566757063E-4 21 0.0 22 3.157034029669806E-4 23 7.892585074174514E-4 24 3.157034029669806E-4 25 0.0018152945670601385 26 0.00520910614895518 27 0.006866549014531828 28 0.004735551044504709 29 0.002525627223735845 30 0.004340921790795983 31 0.006550845611564848 32 0.0037095149848620215 33 0.004183070089312493 34 0.0034727374326367863 35 0.00276240477596108 36 0.008208288477141496 37 0.004261995940054238 38 0.006708697313048337 39 0.004577699343021218 40 0.0024467013729940995 41 0.003946292537087257 42 0.0016574428655766482 43 0.0015785170148349028 44 9.471102089009417E-4 45 0.0013417394626096674 46 5.524809551922161E-4 47 0.0019731462685436286 48 0.0018152945670601385 49 7.892585074174515E-5 50 0.0012628136118679224 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1267012.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.58362808116405 #Duplication Level Percentage of deduplicated Percentage of total 1 76.97231720059098 41.24456017421853 2 13.520861641672518 14.489936430885148 3 4.071075683807589 6.544290159942494 4 1.6789771842739676 3.598627559955853 5 0.9100901490595664 2.438296603376948 6 0.5593825872808244 1.798424910716099 7 0.3869621657974523 1.4514385741500695 8 0.28490933768203225 1.2213180789763836 9 0.21219413454921265 1.0233118428020544 >10 1.2386625033017458 12.150331471140298 >50 0.08618473332065048 3.1725139812876937 >100 0.07038143201083097 7.661355966719209 >500 0.006371363075375954 2.240303475778653 >1k 0.0016298835774217555 0.9652907700505673 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 1.578517014834903E-4 15 0.0 0.0 0.0 0.0 1.578517014834903E-4 16 0.0 0.0 0.0 0.0 1.578517014834903E-4 17 0.0 0.0 0.0 0.0 1.578517014834903E-4 18 0.0 0.0 0.0 0.0 1.578517014834903E-4 19 0.0 0.0 0.0 0.0 1.578517014834903E-4 20 0.0 0.0 0.0 2.3677755222523543E-4 1.578517014834903E-4 21 0.0 0.0 0.0 4.7355510445047086E-4 1.578517014834903E-4 22 0.0 0.0 0.0 7.892585074174514E-4 1.578517014834903E-4 23 0.0 0.0 0.0 0.0015785170148349028 2.3677755222523543E-4 24 0.0 0.0 0.0 0.0022099238207688643 2.3677755222523543E-4 25 0.0 0.0 0.0 0.0031570340296698056 2.3677755222523543E-4 26 0.0 0.0 0.0 0.003709514984862022 3.157034029669806E-4 27 0.0 0.0 0.0 0.004656625193762963 3.157034029669806E-4 28 0.0 0.0 0.0 0.007892585074174514 3.157034029669806E-4 29 0.0 0.0 0.0 0.01689013205873346 3.157034029669806E-4 30 0.0 0.0 0.0 0.030623230087797118 3.157034029669806E-4 31 0.0 0.0 0.0 0.057773722742957445 3.157034029669806E-4 32 0.0 0.0 0.0 0.08981761814410598 3.946292537087257E-4 33 0.0 0.0 0.0 0.11752059175445852 3.946292537087257E-4 34 0.0 0.0 0.0 0.14940663545412355 7.103326566757063E-4 35 0.0 0.0 0.0 0.18594930434755155 7.103326566757063E-4 36 0.0 0.0 0.0 0.23448870255372484 7.892585074174514E-4 37 0.0 0.0 0.0 0.3172029941310737 7.892585074174514E-4 38 0.0 0.0 0.0 0.42075371030424336 7.892585074174514E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGAG 70 3.213196E-5 22.002052 10 AATCGGT 70 3.2171138E-5 21.998579 19 AGTATCG 85 6.1151422E-6 20.705362 8 GTATCAA 2645 0.0 20.628712 1 CAATCGG 75 5.475623E-5 20.53201 18 TAGGACG 515 0.0 19.649992 4 GTCCTAC 595 0.0 19.227926 1 GATATAC 485 0.0 19.052572 1 TCCTACA 590 0.0 19.015722 2 GCGACTC 60 0.007411681 18.333595 31 GTATATG 145 6.3027983E-9 18.207878 1 TTAGGAC 385 0.0 17.713142 3 TTAATAC 125 4.8562106E-7 17.598864 3 ATACACT 645 0.0 17.394913 4 TTAACGG 90 2.2152337E-4 17.111357 35 GTAGGAC 630 0.0 17.110006 3 CTAGATA 245 0.0 17.060123 3 ACTGTTC 595 0.0 17.007977 8 AACGCAG 3225 0.0 16.98562 6 ATAATAC 130 7.3224146E-7 16.921984 3 >>END_MODULE