##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064244_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 929563 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.285156573572742 32.0 32.0 32.0 32.0 32.0 2 31.35160715303858 32.0 32.0 32.0 32.0 32.0 3 31.45069349791246 32.0 32.0 32.0 32.0 32.0 4 31.54099829704926 32.0 32.0 32.0 32.0 32.0 5 31.476724009023595 32.0 32.0 32.0 32.0 32.0 6 35.06587504020707 36.0 36.0 36.0 36.0 36.0 7 35.08766807628961 36.0 36.0 36.0 36.0 36.0 8 35.02365950451986 36.0 36.0 36.0 36.0 36.0 9 35.144147303625466 36.0 36.0 36.0 36.0 36.0 10 34.97844363426685 36.0 36.0 36.0 36.0 36.0 11 35.14727995843208 36.0 36.0 36.0 36.0 36.0 12 35.03941314359543 36.0 36.0 36.0 36.0 36.0 13 35.09159034944377 36.0 36.0 36.0 36.0 36.0 14 35.03036910892538 36.0 36.0 36.0 36.0 36.0 15 35.00210098723809 36.0 36.0 36.0 36.0 36.0 16 35.02197269039323 36.0 36.0 36.0 36.0 36.0 17 34.97884167076357 36.0 36.0 36.0 36.0 36.0 18 34.972760318558294 36.0 36.0 36.0 36.0 36.0 19 34.9736381503997 36.0 36.0 36.0 36.0 36.0 20 34.96401642492225 36.0 36.0 36.0 36.0 36.0 21 34.96245762793915 36.0 36.0 36.0 36.0 36.0 22 34.940377360114375 36.0 36.0 36.0 36.0 36.0 23 34.89319605018702 36.0 36.0 36.0 32.0 36.0 24 34.85350643259252 36.0 36.0 36.0 32.0 36.0 25 34.8367888997303 36.0 36.0 36.0 32.0 36.0 26 34.77211980253087 36.0 36.0 36.0 32.0 36.0 27 34.77038780588298 36.0 36.0 36.0 32.0 36.0 28 34.74210354758096 36.0 36.0 36.0 32.0 36.0 29 34.716886321852314 36.0 36.0 36.0 32.0 36.0 30 34.697734311714214 36.0 36.0 36.0 32.0 36.0 31 34.68584055088251 36.0 36.0 36.0 32.0 36.0 32 34.65128237677274 36.0 36.0 36.0 32.0 36.0 33 34.627909028220785 36.0 36.0 36.0 32.0 36.0 34 34.606536619895586 36.0 36.0 36.0 32.0 36.0 35 34.567415011139644 36.0 36.0 36.0 32.0 36.0 36 34.536693048238796 36.0 36.0 36.0 32.0 36.0 37 34.53960301776211 36.0 36.0 36.0 32.0 36.0 38 34.47738345867897 36.0 36.0 36.0 32.0 36.0 39 34.47776858588391 36.0 36.0 36.0 32.0 36.0 40 34.45830137387138 36.0 36.0 36.0 32.0 36.0 41 34.44571696592915 36.0 36.0 36.0 32.0 36.0 42 34.368057893870564 36.0 36.0 36.0 32.0 36.0 43 34.362842539989224 36.0 36.0 36.0 32.0 36.0 44 34.2967340567557 36.0 36.0 36.0 32.0 36.0 45 34.26102480412839 36.0 36.0 36.0 32.0 36.0 46 34.231674453479755 36.0 36.0 36.0 32.0 36.0 47 34.209979312859915 36.0 36.0 36.0 32.0 36.0 48 34.156315386907615 36.0 36.0 36.0 32.0 36.0 49 34.13286780992789 36.0 36.0 36.0 32.0 36.0 50 33.52591809269517 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 3.0 21 18.0 22 89.0 23 264.0 24 720.0 25 1621.0 26 3302.0 27 6405.0 28 10586.0 29 16493.0 30 24590.0 31 34700.0 32 51134.0 33 82455.0 34 170139.0 35 527039.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.04081417479217 17.77884647453794 11.777217608536377 26.40312174213351 2 15.828490529907763 20.369788652241173 37.05008186686576 26.751638950985306 3 18.094367227505487 24.529885106932312 28.83729936744266 28.53844829811954 4 11.956048164567653 15.721150691238787 36.125684864823576 36.197116279369986 5 14.06865376526389 37.25438727660202 33.48024824568103 15.196710712453058 6 34.601784286957574 35.75362080298292 16.526546459127392 13.11804845093211 7 30.11436556747633 30.56823475116802 20.82903471846448 18.488364962891165 8 28.22616648898461 33.23217468853644 19.216771751887716 19.324887070591235 9 27.60574168444403 13.518648210483963 18.25694715632137 40.61866294875063 10 15.439662461782747 26.95357128257207 31.94994588802802 25.656820367617154 11 37.753264440672055 20.714917348170427 22.47918912347966 19.052629087677854 12 24.72255690864495 23.386548474547098 29.129265458926806 22.761629157881146 13 29.72580457766934 19.193356828421308 25.42837655827083 25.652462035638518 14 23.58194119172127 19.40427921507203 25.34760957568234 31.666170017524365 15 25.237811424845997 27.18903775935485 22.266701666885417 25.30644914891374 16 25.653297875430447 25.500428700676565 23.88642713218074 24.959846291712253 17 23.966745664360563 25.855159897715378 25.28865714319524 24.889437294728815 18 24.9126736441689 24.86254234534871 26.26600355652519 23.9587804539572 19 25.859168081311413 24.67516959600328 25.18670083329568 24.278961489389626 20 25.802616956752335 24.215617614057507 25.060001957930318 24.92176347125984 21 26.96976966596132 24.11079184520038 24.398238742290733 24.52119974654757 22 25.946277982234662 24.209978237085597 24.91686953977299 24.92687424090675 23 24.51670370952091 24.040238652084764 25.452851582586916 25.99020605580741 24 24.959739059620617 25.071619829145153 25.148537858193276 24.82010325304095 25 25.084073300299288 24.334890365834504 25.253941171281465 25.327095162584744 26 24.63862913602348 25.29305574083717 25.719944573304815 24.348370549834538 27 25.252553506916577 24.718506389415452 24.93894606382315 25.08999403984482 28 24.6790327196208 24.73250037115372 25.640697381698786 24.9477695275267 29 24.584336967034197 24.618224732905237 25.47467077766506 25.322767522395512 30 24.582476267525024 25.063795818953277 25.589869266982813 24.76385864653889 31 25.138516821052402 24.73625321412818 24.815866765645676 25.309363199173738 32 24.88661009363812 24.944703594051227 24.703723147893143 25.464963164417515 33 24.631748586379324 24.453163325903038 25.22409222745307 25.690995860264564 34 25.17608304385105 24.702081582902384 25.387694681092547 24.734140692154018 35 25.688217492757165 24.59638595045501 25.427765806491177 24.28763075029665 36 24.692169568440296 25.209658210048747 24.842252033106362 25.255920188404595 37 25.515878437620692 25.08802826371579 24.911272458906698 24.484820839756825 38 25.009413805049242 24.850078430444352 25.108178068308725 25.032329696197685 39 25.482910014943183 24.614183003934283 24.71219047229702 25.19071650882551 40 25.78625080416293 24.969608558230004 24.930341739659916 24.31379889794715 41 24.55275543960625 25.079691240149536 25.691616685941742 24.675936634302467 42 25.956382914633412 25.475394386925203 24.865525461946934 23.70269723649445 43 25.092302528529874 24.413158166514624 25.283362307864433 25.211176997091073 44 24.677963840723617 25.05126114244035 24.874186975689415 25.396588041146618 45 24.883277105530404 25.223656126822387 24.89263645282889 25.000430314818324 46 24.664517975209723 25.061803566856504 24.81394383136932 25.45973462656445 47 25.039616071053967 24.941826502586746 25.314265981171474 24.704291445187817 48 25.787559343294436 25.332069638071797 24.210988339506578 24.66938267912719 49 24.87647394845524 25.485686254048957 24.553633381779143 25.084206415716665 50 25.100936262502056 25.540074896696996 24.22341204909488 25.135576791706065 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35.0 1 31.5 2 28.0 3 69.5 4 111.0 5 141.5 6 172.0 7 162.5 8 153.0 9 206.5 10 260.0 11 398.5 12 537.0 13 970.5 14 1404.0 15 1866.5 16 2329.0 17 2455.5 18 2582.0 19 2684.5 20 2787.0 21 3143.5 22 3500.0 23 4093.5 24 4687.0 25 5298.0 26 5909.0 27 7400.0 28 8891.0 29 10269.5 30 11648.0 31 12945.0 32 14242.0 33 16596.5 34 18951.0 35 21931.5 36 24912.0 37 28933.5 38 32955.0 39 35652.0 40 38349.0 41 42268.5 42 46188.0 43 47655.0 44 49122.0 45 54583.0 46 60044.0 47 64435.5 48 68827.0 49 70971.0 50 73115.0 51 71382.0 52 69649.0 53 68466.5 54 67284.0 55 68134.0 56 68984.0 57 67364.5 58 65745.0 59 59912.0 60 54079.0 61 47145.0 62 40211.0 63 34857.5 64 29504.0 65 25055.5 66 20607.0 67 17208.5 68 13810.0 69 12536.0 70 11262.0 71 8619.5 72 5977.0 73 5110.0 74 4243.0 75 3239.5 76 2236.0 77 1946.5 78 1657.0 79 1363.5 80 1070.0 81 895.0 82 720.0 83 566.0 84 412.0 85 297.0 86 182.0 87 129.0 88 76.0 89 56.5 90 37.0 91 30.0 92 23.0 93 18.5 94 14.0 95 19.0 96 24.0 97 16.0 98 8.0 99 9.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008821349386754851 2 5.378871577289544E-4 3 3.227322946373726E-4 4 0.0 5 0.0 6 4.3030972618316355E-4 7 0.0 8 0.0 9 0.0010757743154579088 10 9.681968839121179E-4 11 1.0757743154579089E-4 12 3.227322946373726E-4 13 7.530420208205361E-4 14 0.0 15 0.004840984419560589 16 0.0010757743154579088 17 0.0 18 4.3030972618316355E-4 19 1.0757743154579089E-4 20 0.0010757743154579088 21 0.0 22 0.0 23 9.681968839121179E-4 24 2.1515486309158177E-4 25 0.001828816336278445 26 0.005056139282652171 27 0.00613191359811008 28 0.0031197455148279356 29 0.002581858357098981 30 0.0037652101041026806 31 0.007853152502842733 32 0.0029045906517363536 33 0.0037652101041026806 34 0.0032273229463737263 35 0.002581858357098981 36 0.007960729934388525 37 0.0034424778094653084 38 0.008283462229025897 39 0.004518252124923217 40 0.002689435788644772 41 0.004087942398740053 42 0.0020439711993700265 43 0.0011833517470036996 44 9.681968839121179E-4 45 0.0011833517470036996 46 5.378871577289544E-4 47 0.0017212389047326542 48 0.0015060840416410723 49 2.1515486309158177E-4 50 0.0017212389047326542 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 929563.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.34664561896412 #Duplication Level Percentage of deduplicated Percentage of total 1 76.10626214200214 41.36120058015375 2 13.800259811947917 14.999956588991317 3 4.349464181823029 7.091363655657415 4 1.925976339576405 4.186814143898743 5 1.0340965772602524 2.809984011007334 6 0.649171040747683 2.116816109856506 7 0.4005392598649922 1.523757564865544 8 0.29901195938227176 1.3000237593904331 9 0.21554237648724403 1.0542604635739437 >10 1.0617756703593466 10.30767822914235 >50 0.07835696163884583 2.9556758560296985 >100 0.07278246628360278 7.742803698319133 >500 0.006562353431467854 2.440403230863379 >1k 1.9885919489296528E-4 0.10926210825042627 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1011 0.10876078329279458 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 992 0.10671681209342455 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 941 0.1012303630845892 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 1.0757743154579087E-4 0.0 19 0.0 0.0 0.0 2.1515486309158175E-4 0.0 20 0.0 0.0 0.0 3.227322946373726E-4 0.0 21 0.0 0.0 0.0 6.454645892747452E-4 0.0 22 0.0 0.0 0.0 6.454645892747452E-4 0.0 23 0.0 0.0 0.0 0.0011833517470036996 0.0 24 0.0 0.0 0.0 0.0020439711993700265 0.0 25 0.0 0.0 0.0 0.002259126062461608 0.0 26 0.0 0.0 0.0 0.0024742809255531902 1.0757743154579087E-4 27 0.0 0.0 0.0 0.0029045906517363536 1.0757743154579087E-4 28 0.0 0.0 0.0 0.004195519830285844 1.0757743154579087E-4 29 0.0 0.0 0.0 0.010542588291487505 1.0757743154579087E-4 30 0.0 0.0 0.0 0.01731996647887233 1.0757743154579087E-4 31 0.0 0.0 0.0 0.03334900377919517 1.0757743154579087E-4 32 0.0 0.0 0.0 0.04862499905869747 1.0757743154579087E-4 33 0.0 0.0 0.0 0.06400857176974557 1.0757743154579087E-4 34 0.0 0.0 0.0 0.07949972191233945 1.0757743154579087E-4 35 0.0 0.0 0.0 0.09929396931676497 1.0757743154579087E-4 36 0.0 0.0 0.0 0.1310293116227733 1.0757743154579087E-4 37 0.0 0.0 0.0 0.17126327102089905 1.0757743154579087E-4 38 0.0 0.0 0.0 0.230968745528813 1.0757743154579087E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGTT 25 0.0023533464 35.197464 6 TACGTTC 30 0.005746364 29.331217 7 CGGATCG 50 0.0025778506 22.003149 26 CGCAATA 260 0.0 21.155735 36 ATACGAA 295 0.0 20.135223 40 CTCTATA 55 0.004486113 19.997482 1 GCTATAT 115 2.0228254E-7 19.128025 1 TCTAGCG 300 0.0 19.067343 28 CTAGCGG 300 0.0 19.067343 29 CGGTCCG 175 9.094947E-12 18.857813 39 GTAATAC 105 1.793016E-6 18.855782 3 GATATAC 200 0.0 18.697645 1 TAGGACA 180 1.4551915E-11 18.332012 4 TACCGCT 60 0.007413929 18.33201 7 CGAATGC 320 0.0 17.874672 43 TTAGGAC 210 0.0 17.808239 3 TAGCGGC 325 0.0 17.600624 30 ATACACT 250 0.0 17.59873 4 GTATCAA 2070 0.0 17.534025 1 GCGCAAT 315 0.0 17.461876 35 >>END_MODULE