##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064243_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 699739 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.091102539661218 32.0 32.0 32.0 32.0 32.0 2 31.375241339985337 32.0 32.0 32.0 32.0 32.0 3 31.44883306489991 32.0 32.0 32.0 32.0 32.0 4 31.541107470070983 32.0 32.0 32.0 32.0 32.0 5 31.479017176404344 32.0 32.0 32.0 32.0 32.0 6 35.02281136252231 36.0 36.0 36.0 36.0 36.0 7 35.036740841942496 36.0 36.0 36.0 36.0 36.0 8 35.00427159269385 36.0 36.0 36.0 36.0 36.0 9 35.09466243842347 36.0 36.0 36.0 36.0 36.0 10 34.95120752166165 36.0 36.0 36.0 36.0 36.0 11 35.09051231959345 36.0 36.0 36.0 36.0 36.0 12 34.99909966430341 36.0 36.0 36.0 36.0 36.0 13 35.03939468859103 36.0 36.0 36.0 36.0 36.0 14 34.97900359991368 36.0 36.0 36.0 36.0 36.0 15 34.97340294023915 36.0 36.0 36.0 36.0 36.0 16 34.95856026318384 36.0 36.0 36.0 36.0 36.0 17 34.90532327053373 36.0 36.0 36.0 32.0 36.0 18 34.90341112900667 36.0 36.0 36.0 32.0 36.0 19 34.90304670741519 36.0 36.0 36.0 32.0 36.0 20 34.88317215418892 36.0 36.0 36.0 32.0 36.0 21 34.878650468246015 36.0 36.0 36.0 32.0 36.0 22 34.875396397799754 36.0 36.0 36.0 32.0 36.0 23 34.83315493348234 36.0 36.0 36.0 32.0 36.0 24 34.792252539875584 36.0 36.0 36.0 32.0 36.0 25 34.762914458105094 36.0 36.0 36.0 32.0 36.0 26 34.70025538093489 36.0 36.0 36.0 32.0 36.0 27 34.70346086183563 36.0 36.0 36.0 32.0 36.0 28 34.682806017672306 36.0 36.0 36.0 32.0 36.0 29 34.635528389871084 36.0 36.0 36.0 32.0 36.0 30 34.60630320733873 36.0 36.0 36.0 32.0 36.0 31 34.58631146756148 36.0 36.0 36.0 32.0 36.0 32 34.5156737011943 36.0 36.0 36.0 32.0 36.0 33 34.451384016040265 36.0 36.0 36.0 32.0 36.0 34 34.40749622359194 36.0 36.0 36.0 32.0 36.0 35 34.325069776016484 36.0 36.0 36.0 32.0 36.0 36 34.2937423810878 36.0 36.0 36.0 32.0 36.0 37 34.262746538352154 36.0 36.0 36.0 32.0 36.0 38 34.185126168471385 36.0 36.0 36.0 32.0 36.0 39 34.17940403493302 36.0 36.0 36.0 32.0 36.0 40 34.12412771047491 36.0 36.0 36.0 32.0 36.0 41 34.0689156957094 36.0 36.0 36.0 32.0 36.0 42 33.9556020173236 36.0 36.0 36.0 32.0 36.0 43 33.92638255120838 36.0 36.0 36.0 32.0 36.0 44 33.807059489323876 36.0 36.0 36.0 32.0 36.0 45 33.72939195900186 36.0 36.0 36.0 27.0 36.0 46 33.65867559189927 36.0 36.0 36.0 27.0 36.0 47 33.54620365593457 36.0 36.0 36.0 21.0 36.0 48 33.44448001326209 36.0 36.0 36.0 21.0 36.0 49 33.379907365460554 36.0 36.0 36.0 21.0 36.0 50 32.78280616058273 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 9.0 20 14.0 21 40.0 22 173.0 23 387.0 24 983.0 25 2150.0 26 4262.0 27 7448.0 28 11873.0 29 16645.0 30 22537.0 31 29536.0 32 40820.0 33 61253.0 34 117486.0 35 384120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.55643230681498 18.365564780420733 12.39768522422425 24.68031768854003 2 15.86367449484592 21.49650511549339 37.00218796490681 25.63763242475387 3 17.720422731462627 26.82844219597419 28.8886507034806 26.562484369082583 4 11.867424854124181 15.886351911212609 35.90467302808619 36.341550206577026 5 13.717829076269867 37.81066940673594 32.139269070324794 16.3322324466694 6 32.29927815736484 36.336652199326316 17.294211968210913 14.06985767509793 7 28.920395919615626 31.529801154146263 21.337129039726296 18.21267388651181 8 29.0376840507675 30.536242799100812 19.9221423988087 20.503930751322994 9 28.707705235718816 13.260505450658252 19.375132193468357 38.65665712015458 10 16.940938732169933 26.05244015200127 29.968373560696897 27.0382475551319 11 36.64123337415808 21.59419440677167 22.811648343167953 18.9529238759023 12 25.899265153528894 24.109452395039284 28.277155163789875 21.714127287641947 13 29.426669486777868 19.47491625413013 26.381378119748017 24.717036139343982 14 24.594741753711027 19.798810699417928 26.089013189203403 29.517434357667643 15 24.872838904506626 26.594140656821537 24.160393767069742 24.37262667160209 16 24.86076832163125 25.648497355419853 24.689845984111084 24.800888338837815 17 22.93569459469888 25.388895002279423 25.96954007136947 25.705870331652232 18 24.1549670161318 23.806121165696776 28.450158345433135 23.58875347273829 19 25.177101747937446 23.717557546456607 27.897973387220095 23.207367318385856 20 26.117707249591277 22.6928441583683 26.592886460036357 24.59656213200407 21 27.844667797564522 22.54140472376129 26.063575133013885 23.55035234566031 22 26.081296026089728 22.89182109329336 26.752403396123412 24.274479484493504 23 23.920123818656545 22.92731656217443 27.831758685098457 25.320800934070565 24 24.47965792617745 24.273293203683696 27.297308112248693 23.949740757890165 25 24.376001291943503 23.732173251910403 27.424216223323295 24.467609232822795 26 24.057818569513483 24.783266114625285 27.80796505961075 23.35095025625048 27 24.54594826354152 24.1251965127912 26.90481634986423 24.42403887380306 28 23.312801017564418 24.242186048505808 28.10550085035229 24.339512083577482 29 23.482779466555765 24.2302245050499 27.666185043381823 24.62081098501251 30 23.29622272084149 24.91203498592274 27.799945691786597 23.991796601449174 31 24.225728536923494 24.71908988266232 26.24819562949306 24.806985950921124 32 23.837596503714376 24.768834123656237 26.185127066201336 25.208442306428054 33 23.71948509287565 24.0783536920876 27.008899541088383 25.19326167394837 34 24.542746976656442 24.19332249093211 26.991719568628685 24.272210963782758 35 25.447968741514394 24.173448008757862 26.82538865879488 23.553194590932865 36 23.912142442666486 25.523883843710966 26.071278502396815 24.492695211225733 37 24.96366388125485 25.420562884709103 25.932055388106907 23.683717845929138 38 23.813130916122724 25.346552766490827 26.544391197652633 24.29592511973382 39 24.581715384956187 25.09307520476545 25.852254456533704 24.47295495374466 40 24.866053755711203 25.630644213908116 26.291479032357184 23.2118229980235 41 23.390799915965303 26.08276845726307 26.660435522665786 23.86599610410584 42 25.186395187810035 26.512062630498068 25.64843516648731 22.653107015204586 43 24.180829231763017 25.252382340667566 26.044828591517895 24.521959836051515 44 23.928978218710387 26.04308239332656 25.23934265980115 24.788596728161902 45 24.05903394580504 26.297744997020295 25.221477334926323 24.421743722248344 46 23.903900213081887 25.91996067060056 25.106076477960816 25.070062638356738 47 24.33280645742166 25.727074466716783 25.578158182821177 24.36196089304038 48 25.553753260209366 26.51241559183965 23.948551216549358 23.98527993140162 49 24.27308091360431 26.927661082639975 24.255645716800956 24.543612286954758 50 24.36178316276584 27.11372929001905 24.162704384449274 24.36178316276584 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 78.0 1 71.5 2 65.0 3 147.0 4 229.0 5 286.5 6 344.0 7 358.0 8 372.0 9 545.5 10 719.0 11 1061.5 12 1404.0 13 2523.0 14 3642.0 15 5108.0 16 6574.0 17 7168.5 18 7763.0 19 7735.0 20 7707.0 21 7578.5 22 7450.0 23 7542.5 24 7635.0 25 6521.5 26 5408.0 27 5741.0 28 6074.0 29 6803.5 30 7533.0 31 8715.5 32 9898.0 33 11599.5 34 13301.0 35 15157.0 36 17013.0 37 20215.5 38 23418.0 39 25451.0 40 27484.0 41 30234.5 42 32985.0 43 32666.5 44 32348.0 45 37070.5 46 41793.0 47 45468.5 48 49144.0 49 51737.0 50 54330.0 51 51364.5 52 48399.0 53 47521.0 54 46643.0 55 48260.0 56 49877.0 57 49284.5 58 48692.0 59 43758.5 60 38825.0 61 34093.5 62 29362.0 63 25584.5 64 21807.0 65 18483.0 66 15159.0 67 13113.0 68 11067.0 69 10344.5 70 9622.0 71 7359.5 72 5097.0 73 4466.0 74 3835.0 75 2989.0 76 2143.0 77 1957.5 78 1772.0 79 1441.5 80 1111.0 81 908.0 82 705.0 83 608.0 84 511.0 85 353.5 86 196.0 87 135.0 88 74.0 89 60.5 90 47.0 91 37.5 92 28.0 93 24.0 94 20.0 95 19.0 96 18.0 97 12.5 98 7.0 99 9.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008574625681861379 2 2.85820856062046E-4 3 5.71641712124092E-4 4 0.0 5 0.0 6 2.85820856062046E-4 7 1.42910428031023E-4 8 0.0 9 0.0010003729962171609 10 0.001143283424248184 11 0.0 12 1.42910428031023E-4 13 4.2873128409306896E-4 14 0.0 15 0.005144775409116828 16 8.574625681861379E-4 17 0.0 18 4.2873128409306896E-4 19 0.0 20 4.2873128409306896E-4 21 0.0 22 0.0 23 8.574625681861379E-4 24 0.0010003729962171609 25 0.002572387704558414 26 0.004716044125023759 27 0.005573506693209897 28 0.004144402412899667 29 0.0031440294166825058 30 0.004144402412899667 31 0.007002610973520127 32 0.003572760700775575 33 0.00571641712124092 34 0.002429477276527391 35 0.003572760700775575 36 0.008717536109892402 37 0.0031440294166825058 38 0.008860446537923426 39 0.005144775409116828 40 0.002572387704558414 41 0.0040014919848686435 42 0.002286566848496368 43 0.0010003729962171609 44 0.00142910428031023 45 8.574625681861379E-4 46 0.001143283424248184 47 0.002429477276527391 48 0.0020007459924343217 49 7.14552140155115E-4 50 0.002286566848496368 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 699739.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.56943491760073 #Duplication Level Percentage of deduplicated Percentage of total 1 73.17844314296887 33.347003021748655 2 14.34221184333303 13.071329783384138 3 5.265175310750511 7.197931909590108 4 2.416909033378472 4.405487155932063 5 1.2877122118347855 2.934015891490247 6 0.788873690440854 2.15691169768512 7 0.5176012623990724 1.6510757928113757 8 0.3617936312677558 1.3189385066926749 9 0.25442712756984925 1.0434690387959709 >10 1.3073797581102191 10.71074317851095 >50 0.12347338811777939 4.015472878526286 >100 0.1405259553113142 12.76593265403533 >500 0.013894701199319466 4.376237464399931 >1k 0.0015789433181044843 1.0054510263971035 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1856 0.2652417544255787 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1707 0.24394810064895628 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 1337 0.19107124227747774 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1060 0.15148505371288437 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1027 0.1467690095878606 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 999 0.14276751760299197 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 988 0.14119550289465072 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 949 0.13562199620144083 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 935 0.1336212502090065 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 935 0.1336212502090065 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 907 0.12961975822413785 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 885 0.12647572880745536 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 848 0.1211880429703075 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 816 0.11661490927331475 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 806 0.11518580499300453 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 789 0.11275632771647714 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 788 0.11261341728844614 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 784 0.11204177557632203 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 770 0.1100410295838877 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 767 0.10961229829979464 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 759 0.10846901487554644 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 750 0.10718282102326726 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 737 0.10532498545886394 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 730 0.10432461246264678 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC 722 0.1031813290383986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 1.42910428031023E-4 3 0.0 0.0 0.0 0.0 1.42910428031023E-4 4 0.0 0.0 0.0 0.0 1.42910428031023E-4 5 0.0 0.0 0.0 0.0 2.85820856062046E-4 6 0.0 0.0 0.0 0.0 2.85820856062046E-4 7 0.0 0.0 0.0 0.0 2.85820856062046E-4 8 0.0 0.0 0.0 0.0 2.85820856062046E-4 9 0.0 0.0 0.0 0.0 2.85820856062046E-4 10 0.0 0.0 0.0 0.0 2.85820856062046E-4 11 0.0 0.0 0.0 0.0 2.85820856062046E-4 12 0.0 0.0 0.0 0.0 5.71641712124092E-4 13 0.0 0.0 0.0 0.0 5.71641712124092E-4 14 0.0 0.0 0.0 0.0 5.71641712124092E-4 15 0.0 0.0 0.0 0.0 8.574625681861379E-4 16 0.0 0.0 0.0 0.0 8.574625681861379E-4 17 0.0 0.0 0.0 1.42910428031023E-4 8.574625681861379E-4 18 0.0 0.0 0.0 4.2873128409306896E-4 8.574625681861379E-4 19 0.0 0.0 0.0 4.2873128409306896E-4 8.574625681861379E-4 20 0.0 0.0 0.0 5.71641712124092E-4 0.001143283424248184 21 0.0 0.0 0.0 8.574625681861379E-4 0.001286193852279207 22 0.0 0.0 0.0 0.00142910428031023 0.0015720147083412529 23 0.0 0.0 0.0 0.002715298132589437 0.0017149251363722758 24 0.0 0.0 0.0 0.005430596265178874 0.0017149251363722758 25 0.0 0.0 0.0 0.0065738796894270575 0.0017149251363722758 26 0.0 0.0 0.0 0.008431715253830357 0.0020007459924343217 27 0.0 0.0 0.0 0.01143283424248184 0.0020007459924343217 28 0.0 0.0 0.0 0.01672052007962969 0.0020007459924343217 29 0.0 0.0 0.0 0.03015410031454585 0.0020007459924343217 30 0.0 0.0 0.0 0.052448127087385436 0.002143656420465345 31 0.0 0.0 0.0 0.09389215121638211 0.002143656420465345 32 0.0 0.0 0.0 0.13819438390599922 0.002143656420465345 33 0.0 0.0 0.0 0.17620855776225136 0.002143656420465345 34 0.0 0.0 0.0 0.21722385060715496 0.002143656420465345 35 0.0 0.0 0.0 0.2678141421301371 0.002143656420465345 36 0.0 0.0 0.0 0.33398167030850073 0.002143656420465345 37 0.0 0.0 0.0 0.422586135687735 0.002143656420465345 38 0.0 0.0 0.0 0.5399155971012048 0.002143656420465345 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTTAG 40 7.0303533E-4 27.499195 1 GTATAAT 50 0.0025797992 21.999357 1 GTCCTAA 125 9.949872E-10 21.119383 1 ATTCGCT 55 0.004482514 19.999416 10 TATACAG 80 8.983695E-5 19.249435 5 AGCGGGC 185 1.8189894E-12 19.02919 29 CGCAATA 260 0.0 18.616173 36 GTCTATT 60 0.0074072536 18.334108 9 CGGTCCG 180 1.4551915E-11 18.334108 39 GTATTAT 60 0.007410308 18.332798 1 GTCCATA 60 0.007410308 18.332798 1 GCAATAC 285 0.0 17.755135 37 ATACGAA 275 0.0 17.600744 40 TCCCCGC 125 4.8467336E-7 17.599485 1 TCTATTG 75 0.0012903864 17.599485 10 AACGCAG 4410 0.0 17.409924 6 TCGTTTA 360 0.0 17.113058 30 TAGCGGC 285 0.0 16.984386 30 TCTAGCG 285 0.0 16.984386 28 GTATCAA 4455 0.0 16.937777 1 >>END_MODULE