##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064242_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303037 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.319713101009413 32.0 32.0 32.0 32.0 32.0 2 31.441055012252146 32.0 32.0 32.0 32.0 32.0 3 31.502311906722525 32.0 32.0 32.0 32.0 32.0 4 31.579859205839895 32.0 32.0 32.0 32.0 32.0 5 31.543616182809853 32.0 32.0 32.0 32.0 32.0 6 35.12730950847904 36.0 36.0 36.0 36.0 36.0 7 35.14997808964749 36.0 36.0 36.0 36.0 36.0 8 35.10213754482797 36.0 36.0 36.0 36.0 36.0 9 35.19140592323932 36.0 36.0 36.0 36.0 36.0 10 35.07535933361831 36.0 36.0 36.0 36.0 36.0 11 35.196711221553954 36.0 36.0 36.0 36.0 36.0 12 35.113566230275886 36.0 36.0 36.0 36.0 36.0 13 35.14729128950291 36.0 36.0 36.0 36.0 36.0 14 35.09532269613219 36.0 36.0 36.0 36.0 36.0 15 35.07033491758101 36.0 36.0 36.0 36.0 36.0 16 35.08225936792278 36.0 36.0 36.0 36.0 36.0 17 35.061701241023854 36.0 36.0 36.0 36.0 36.0 18 35.05871590752987 36.0 36.0 36.0 36.0 36.0 19 35.03490154155254 36.0 36.0 36.0 36.0 36.0 20 35.03253015839151 36.0 36.0 36.0 36.0 36.0 21 35.02373992449946 36.0 36.0 36.0 36.0 36.0 22 34.9979478710121 36.0 36.0 36.0 36.0 36.0 23 34.960932805438375 36.0 36.0 36.0 36.0 36.0 24 34.93330197070382 36.0 36.0 36.0 36.0 36.0 25 34.90211559610356 36.0 36.0 36.0 32.0 36.0 26 34.857426918805835 36.0 36.0 36.0 32.0 36.0 27 34.832423791496325 36.0 36.0 36.0 32.0 36.0 28 34.795304354365996 36.0 36.0 36.0 32.0 36.0 29 34.763833260298824 36.0 36.0 36.0 32.0 36.0 30 34.73598984526149 36.0 36.0 36.0 32.0 36.0 31 34.73709035123331 36.0 36.0 36.0 32.0 36.0 32 34.68134749819077 36.0 36.0 36.0 32.0 36.0 33 34.68633200745643 36.0 36.0 36.0 32.0 36.0 34 34.66354907803846 36.0 36.0 36.0 32.0 36.0 35 34.62836358445693 36.0 36.0 36.0 32.0 36.0 36 34.5862534985576 36.0 36.0 36.0 32.0 36.0 37 34.54908034077313 36.0 36.0 36.0 32.0 36.0 38 34.491923099651046 36.0 36.0 36.0 32.0 36.0 39 34.446001149622 36.0 36.0 36.0 32.0 36.0 40 34.46172671996267 36.0 36.0 36.0 32.0 36.0 41 34.44079945542605 36.0 36.0 36.0 32.0 36.0 42 34.401663191451966 36.0 36.0 36.0 32.0 36.0 43 34.382340639598105 36.0 36.0 36.0 32.0 36.0 44 34.30310113987554 36.0 36.0 36.0 32.0 36.0 45 34.262779184320934 36.0 36.0 36.0 32.0 36.0 46 34.19923762717406 36.0 36.0 36.0 32.0 36.0 47 34.17761506388537 36.0 36.0 36.0 32.0 36.0 48 34.125899725027 36.0 36.0 36.0 32.0 36.0 49 34.08968663207568 36.0 36.0 36.0 32.0 36.0 50 33.54093628960651 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 2.0 19 3.0 20 18.0 21 43.0 22 138.0 23 381.0 24 958.0 25 2310.0 26 4742.0 27 8714.0 28 14978.0 29 23397.0 30 33326.0 31 47297.0 32 67541.0 33 108129.0 34 222500.0 35 768558.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.87684606564096 18.55866808503453 12.082989870336004 26.481495978988505 2 14.643123555288145 20.79510187041261 39.907661232145436 24.654113342153813 3 18.503925828660275 24.93958345004785 29.402772139240867 27.153718582051006 4 11.862057639192134 16.52247787284628 37.333015102410755 34.282449385550834 5 13.036314394756252 38.13629236928806 34.470932137767385 14.356461098188309 6 32.758803287092604 36.94886403752468 17.304049926479394 12.988282748903329 7 28.70626751678388 31.053785160195112 21.551131357844298 18.688815965176712 8 26.253667393942 36.001126598860964 19.811716781641657 17.933489225555377 9 27.503973464700053 13.865185388701162 18.907552384117192 39.72328876248159 10 15.437356727174773 27.72626074330345 32.942677055857125 23.89370547366466 11 36.495845087933105 20.54486598988823 24.530097403295073 18.42919151888359 12 24.997122101188456 23.291410661579054 30.855679897838428 20.855787339394062 13 30.108255540172586 20.350675503519494 25.589473134882752 23.951595821425173 14 22.27407552368125 21.07556589040202 25.938827429808104 30.711531156108624 15 23.54986262260357 30.50499623938971 22.449615496784293 23.49552564122243 16 23.521881775100248 26.100880643118895 26.966098117841174 23.41113946393968 17 22.44573442330066 27.16456030378286 27.006774947123485 23.382930325792994 18 23.020333298798572 25.462401240181578 29.493451825929462 22.023813635090388 19 25.44803059930808 24.54828569586719 26.110637004656816 23.893046700167915 20 25.502232870898695 25.502232870898695 26.35793008761879 22.637604170583817 21 25.376869574693583 24.5700620934018 25.246328385149464 24.806739946755158 22 25.193241015597422 26.28615019078521 25.704585291580585 22.81602350203678 23 23.11614517821114 26.164110962654053 26.73976791071293 23.979975948421874 24 24.673222678254035 25.33683082788705 27.002336097152174 22.98761039670675 25 23.966032624336634 25.702697206095092 27.05509913546659 23.27617103410168 26 22.428749592279207 26.960148890040102 27.765920297780077 22.845181219900613 27 23.40963093491168 26.281765937459706 26.737110965119637 23.57149216250898 28 22.811344966047372 26.614668393973258 26.368312315041077 24.205674324938293 29 23.53250867609205 25.508785070828534 25.99136151330078 24.967344739778635 30 22.943107313370636 26.0647568643673 26.80551068037762 24.18662514188444 31 24.56268669087828 25.076441568249425 26.22237435492833 24.13849738594396 32 23.512581773082957 26.634770943272272 26.053341683320593 23.799305600324175 33 22.827347444053288 26.334228971872957 27.390575917837634 23.447847666236115 34 23.81015239412342 26.237161387963038 27.314979320845765 22.637706897067776 35 23.629163468917884 26.408211818879508 27.096930161166537 22.86569455103607 36 22.751975734746146 26.58785985158101 27.017045389133592 23.64311902453925 37 23.4928399681657 26.379953292294612 25.736897322096674 24.390309417443017 38 23.69470699070183 26.966449082655064 25.8146736815445 23.524170245098603 39 24.783957439231795 25.399083948843575 25.859718922104953 23.957239689819676 40 25.243091743246005 25.71515403612877 26.514766624251923 22.52698759637331 41 24.250438413040726 25.237088400185726 27.49028200415197 23.022191182621576 42 24.375581824586554 27.10809485400376 26.43787897741619 22.078444343993496 43 22.95022332734724 26.591610259243907 27.11124925173827 23.34691716167058 44 22.561280717103344 26.968964405765067 26.300824239075375 24.168930638056207 45 22.913256327785465 27.166519700726692 26.16661409660459 23.753609874883253 46 23.369431331814305 25.60814165784746 26.16576632717511 24.856660683163128 47 24.514531253957156 25.75150477468095 26.292862959020553 23.44110101234134 48 23.562809523480617 26.3169689281211 25.537006210998985 24.5832153373993 49 23.958143871806975 26.105591944959265 25.91189031760467 24.02437386562909 50 23.260379397305016 27.640301639122832 25.226973770043916 23.872345193528236 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 120.0 1 88.0 2 56.0 3 141.5 4 227.0 5 275.5 6 324.0 7 286.5 8 249.0 9 359.5 10 470.0 11 728.5 12 987.0 13 1632.5 14 2278.0 15 3054.5 16 3831.0 17 4004.5 18 4178.0 19 4245.5 20 4313.0 21 4789.5 22 5266.0 23 6129.5 24 6993.0 25 8370.0 26 9747.0 27 13403.5 28 17060.0 29 21710.0 30 26360.0 31 31651.5 32 36943.0 33 45513.5 34 54084.0 35 63041.5 36 71999.0 37 73754.5 38 75510.0 39 73208.5 40 70907.0 41 69851.0 42 68795.0 43 67691.5 44 66588.0 45 71473.5 46 76359.0 47 79569.5 48 82780.0 49 85700.0 50 88620.0 51 86252.5 52 83885.0 53 82398.0 54 80911.0 55 80018.0 56 79125.0 57 76223.5 58 73322.0 59 66753.0 60 60184.0 61 52901.0 62 45618.0 63 39742.5 64 33867.0 65 28591.5 66 23316.0 67 19936.0 68 16556.0 69 14531.5 70 12507.0 71 9715.5 72 6924.0 73 5752.0 74 4580.0 75 3632.0 76 2684.0 77 2267.5 78 1851.0 79 1521.5 80 1192.0 81 922.5 82 653.0 83 542.0 84 431.0 85 303.5 86 176.0 87 128.0 88 80.0 89 61.5 90 43.0 91 36.0 92 29.0 93 26.0 94 23.0 95 20.5 96 18.0 97 14.0 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010053436702104391 2 6.906941245720575E-4 3 0.0 4 0.0 5 0.0 6 7.67437916191175E-5 7 7.67437916191175E-5 8 0.0 9 0.001381388249144115 10 0.00122790066590588 11 7.67437916191175E-5 12 2.3023137485735247E-4 13 6.906941245720575E-4 14 1.53487583238235E-4 15 0.0043743961222896975 16 9.209254994294099E-4 17 7.67437916191175E-5 18 1.53487583238235E-4 19 7.67437916191175E-5 20 4.6046274971470495E-4 21 0.0 22 7.67437916191175E-5 23 3.0697516647647E-4 24 6.906941245720575E-4 25 0.0016883634156205846 26 0.004758115080385285 27 0.005295321621719107 28 0.0034534706228602874 29 0.0023790575401926423 30 0.0030697516647646994 31 0.006216247121148518 32 0.0031464954563838175 33 0.004297652330670579 34 0.002609288915049995 35 0.002839520289907347 36 0.007981354328388219 37 0.0030697516647646994 38 0.007060428828958808 39 0.004067420955813227 40 0.0023790575401926423 41 0.0032232392480029343 42 0.0018418509988588198 43 0.0013046444575249975 44 0.0013046444575249975 45 0.0010744130826676448 46 7.674379161911748E-4 47 0.001381388249144115 48 0.0019953385820970547 49 1.53487583238235E-4 50 0.001765107207239702 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1303037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.48260693434546 #Duplication Level Percentage of deduplicated Percentage of total 1 77.30001916642819 44.43406617761162 2 13.540315200636977 15.566652328907166 3 4.182823434286626 7.213187860466013 4 1.6927589914418637 3.8921679895852686 5 0.8714503715918445 2.504661958650164 6 0.5473722870098696 1.8878631612565238 7 0.3529954119836008 1.4203767561676466 8 0.2424657708449215 1.115005168040936 9 0.18315816708603203 0.9475568032879393 >10 0.9607695948577442 9.940820099175365 >50 0.06513859027510444 2.6751734522529667 >100 0.05562716128886594 6.246804881632689 >500 0.004434029601462525 1.713872089724474 >1k 6.718226668882613E-4 0.4417912732412794 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1359 0.10429481281038068 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.674379161911749E-5 2 0.0 0.0 0.0 0.0 7.674379161911749E-5 3 0.0 0.0 0.0 0.0 7.674379161911749E-5 4 0.0 0.0 0.0 0.0 7.674379161911749E-5 5 0.0 0.0 0.0 0.0 1.5348758323823497E-4 6 0.0 0.0 0.0 0.0 1.5348758323823497E-4 7 0.0 0.0 0.0 0.0 1.5348758323823497E-4 8 0.0 0.0 0.0 0.0 1.5348758323823497E-4 9 0.0 0.0 0.0 1.5348758323823497E-4 1.5348758323823497E-4 10 0.0 0.0 0.0 2.3023137485735247E-4 2.3023137485735247E-4 11 0.0 0.0 0.0 2.3023137485735247E-4 2.3023137485735247E-4 12 0.0 0.0 0.0 2.3023137485735247E-4 2.3023137485735247E-4 13 0.0 0.0 0.0 2.3023137485735247E-4 2.3023137485735247E-4 14 0.0 0.0 0.0 3.0697516647646995E-4 2.3023137485735247E-4 15 0.0 0.0 0.0 3.837189580955875E-4 2.3023137485735247E-4 16 0.0 0.0 0.0 3.837189580955875E-4 2.3023137485735247E-4 17 0.0 0.0 0.0 3.837189580955875E-4 2.3023137485735247E-4 18 0.0 0.0 0.0 3.837189580955875E-4 2.3023137485735247E-4 19 0.0 0.0 0.0 5.372065413338224E-4 2.3023137485735247E-4 20 0.0 0.0 0.0 6.139503329529399E-4 4.6046274971470495E-4 21 0.0 0.0 0.0 8.441817078102924E-4 4.6046274971470495E-4 22 0.0 0.0 0.0 9.976692910485274E-4 5.372065413338224E-4 23 0.0 0.0 0.0 0.0013046444575249975 6.139503329529399E-4 24 0.0 0.0 0.0 0.0022255699569544074 6.139503329529399E-4 25 0.0 0.0 0.0 0.002609288915049995 6.139503329529399E-4 26 0.0 0.0 0.0 0.0032232392480029347 6.139503329529399E-4 27 0.0 0.0 0.0 0.004144164747432345 6.139503329529399E-4 28 0.0 0.0 0.0 0.007444147787054396 6.139503329529399E-4 29 0.0 0.0 0.0 0.013660394908202913 6.139503329529399E-4 30 0.0 0.0 0.0 0.026092889150499947 6.139503329529399E-4 31 0.0 0.0 0.0 0.052492753467476366 6.139503329529399E-4 32 0.0 0.0 0.0 0.0781251798682616 6.139503329529399E-4 33 0.0 0.0 0.0 0.10122506114561597 6.139503329529399E-4 34 0.0 0.0 0.0 0.1263202810050674 6.906941245720575E-4 35 0.0 0.0 0.0 0.15939685519290703 6.906941245720575E-4 36 0.0 0.0 0.0 0.203140816415804 7.67437916191175E-4 37 0.0 0.0 0.0 0.27274743541434354 7.67437916191175E-4 38 0.0 0.0 0.0 0.3620004650673772 7.67437916191175E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 40 7.036015E-4 27.4976 5 ACCGTCG 225 0.0 21.509235 8 TTAGGAC 1335 0.0 21.091793 3 GTATCAA 2650 0.0 20.756094 1 TAGGACC 1100 0.0 20.398222 4 TGTAGGA 2225 0.0 20.267897 2 TAGGACG 2220 0.0 20.016272 4 ATACCGT 270 0.0 19.55385 6 GTAGGAC 2155 0.0 19.497139 3 GACGTGA 1245 0.0 19.436056 7 TACCGTC 250 0.0 19.358313 7 AGGACGT 2245 0.0 19.205452 5 CTGTAGG 2290 0.0 19.023096 1 GGACGTG 2215 0.0 18.869686 6 TTTAGGA 1515 0.0 18.585838 2 CCGTCGT 250 0.0 18.47839 9 CGTCGTA 250 0.0 18.47839 10 AGGACCT 1680 0.0 18.462675 5 CTTTAGG 1445 0.0 18.423367 1 CCTTACG 60 0.007416133 18.331734 2 >>END_MODULE