##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064240_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303728 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29147720997018 32.0 32.0 32.0 32.0 32.0 2 31.359049587030423 32.0 32.0 32.0 32.0 32.0 3 31.44399905501761 32.0 32.0 32.0 32.0 32.0 4 31.53604969748291 32.0 32.0 32.0 32.0 32.0 5 31.477402494998955 32.0 32.0 32.0 32.0 32.0 6 35.05325727452352 36.0 36.0 36.0 36.0 36.0 7 35.066974859786704 36.0 36.0 36.0 36.0 36.0 8 35.01316378876575 36.0 36.0 36.0 36.0 36.0 9 35.13690969281936 36.0 36.0 36.0 36.0 36.0 10 34.97362870169238 36.0 36.0 36.0 36.0 36.0 11 35.131283519261686 36.0 36.0 36.0 36.0 36.0 12 35.033152620792066 36.0 36.0 36.0 36.0 36.0 13 35.07585017733761 36.0 36.0 36.0 36.0 36.0 14 35.01714621454782 36.0 36.0 36.0 36.0 36.0 15 34.99097817949757 36.0 36.0 36.0 36.0 36.0 16 35.00076012787944 36.0 36.0 36.0 36.0 36.0 17 34.96423026889045 36.0 36.0 36.0 36.0 36.0 18 34.96238632598211 36.0 36.0 36.0 36.0 36.0 19 34.96399939251132 36.0 36.0 36.0 36.0 36.0 20 34.95586886221666 36.0 36.0 36.0 36.0 36.0 21 34.949131260508324 36.0 36.0 36.0 36.0 36.0 22 34.940713093528714 36.0 36.0 36.0 36.0 36.0 23 34.88492461617761 36.0 36.0 36.0 32.0 36.0 24 34.85276376667526 36.0 36.0 36.0 32.0 36.0 25 34.82218837058036 36.0 36.0 36.0 32.0 36.0 26 34.76328497968902 36.0 36.0 36.0 32.0 36.0 27 34.758456518537606 36.0 36.0 36.0 32.0 36.0 28 34.74383613759925 36.0 36.0 36.0 32.0 36.0 29 34.721034602309686 36.0 36.0 36.0 32.0 36.0 30 34.69736018556018 36.0 36.0 36.0 32.0 36.0 31 34.69528690033504 36.0 36.0 36.0 32.0 36.0 32 34.65460126652185 36.0 36.0 36.0 32.0 36.0 33 34.62744146018188 36.0 36.0 36.0 32.0 36.0 34 34.624775259870155 36.0 36.0 36.0 32.0 36.0 35 34.58141805652713 36.0 36.0 36.0 32.0 36.0 36 34.5562931838543 36.0 36.0 36.0 32.0 36.0 37 34.55015846863763 36.0 36.0 36.0 32.0 36.0 38 34.51269053054011 36.0 36.0 36.0 32.0 36.0 39 34.519838493918975 36.0 36.0 36.0 32.0 36.0 40 34.49334677171925 36.0 36.0 36.0 32.0 36.0 41 34.47539670851589 36.0 36.0 36.0 32.0 36.0 42 34.41280543180786 36.0 36.0 36.0 32.0 36.0 43 34.41036243756366 36.0 36.0 36.0 32.0 36.0 44 34.3380152915332 36.0 36.0 36.0 32.0 36.0 45 34.30201008185757 36.0 36.0 36.0 32.0 36.0 46 34.28078249450806 36.0 36.0 36.0 32.0 36.0 47 34.251379122025455 36.0 36.0 36.0 32.0 36.0 48 34.20681767976142 36.0 36.0 36.0 32.0 36.0 49 34.183335787833045 36.0 36.0 36.0 32.0 36.0 50 33.57872424309365 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 1.0 19 5.0 20 12.0 21 51.0 22 166.0 23 381.0 24 1011.0 25 2455.0 26 4774.0 27 8941.0 28 15102.0 29 23434.0 30 33541.0 31 48708.0 32 70689.0 33 113645.0 34 233782.0 35 747029.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.67132496996829 18.283290708502925 11.944106497128768 26.101277824400015 2 16.064685519853526 20.05004130478637 36.87017871127532 27.015094464084775 3 18.01986926660745 23.921280763843825 29.044612271634595 29.014237697914126 4 12.148623025661795 15.70166476442939 36.08912288452807 36.060589325380754 5 14.026238601916965 36.9643821410601 33.58998195942712 15.419397297595818 6 34.37419701240676 36.11091296093885 16.281654490018983 13.23323553663541 7 30.343315740181804 30.835903528882962 20.457887272412094 18.362893458523143 8 28.45639581262349 32.93969294208608 18.873645422971663 19.730265822318767 9 27.294141650916764 13.853980020127143 18.535458751626127 40.31641957732997 10 15.586794393577144 27.015637572206895 31.659583085005284 25.73798494921068 11 37.68592835315342 21.155179608016397 22.012106819827448 19.146785219002737 12 24.374446777927265 23.870353126347098 28.780510628767086 22.974689466958548 13 29.21822757546308 19.591598483413193 25.288923899895455 25.901250041228273 14 23.29766891381401 19.58554206517162 25.25475041937461 31.862038601639757 15 25.32912676989776 27.028013840851685 22.292485025048382 25.350374364202178 16 25.899176280814686 26.040847696708113 23.42372332730699 24.636252695170207 17 23.935744265675048 25.92128112612447 25.142667795736536 25.00030681246395 18 24.62344436134921 25.26660146886805 25.796161000210933 24.313793169571802 19 25.407370249009 25.127864094350972 25.272526171103177 24.19223948553686 20 25.7554931357855 24.5853014225469 24.995589537001102 24.6636159046665 21 26.72190825080078 24.067213406477425 24.771654823705557 24.439223519016238 22 25.796581646310923 24.33791737073789 25.011601355191694 24.853899627759493 23 24.637633358671067 24.07140791626429 25.599725708184494 25.691233016880144 24 24.703272630207973 25.270034562583128 25.121383239678398 24.9053095675305 25 24.97439984413628 24.604453621722126 25.33230344641379 25.088843087727803 26 24.716568942399444 25.165609649082437 25.672410460331925 24.445410948186193 27 25.185306212619462 24.95349606068486 24.894047725890246 24.96715000080543 28 24.529906924869486 24.761175689088873 25.682338737019418 25.02657864902223 29 24.585295060665892 24.959461470371206 25.467401192607493 24.987842276355412 30 24.485686671575845 25.15134081983309 25.777568114874818 24.58540439371625 31 24.997545319538027 24.985502043521485 24.714873522589198 25.30207911435129 32 24.67022426360888 24.84074039130498 24.76810036749562 25.720934977590517 33 24.512417943694686 24.43578859196826 25.399139971680125 25.65265349265693 34 25.077318638701048 24.664875860630087 25.63350658435709 24.62429891631178 35 25.417333682086195 24.539673067202173 25.425541135834894 24.61745211487674 36 24.629651221660033 25.054693181225435 25.07586473524818 25.23979086186635 37 25.51469685812469 24.909563696612665 24.700079774177713 24.87565967108493 38 24.707967941676433 24.8290151147877 25.369891932029482 25.093125011506384 39 25.24691642120766 24.763055351006383 24.94047619047619 25.04955203730977 40 25.216173365170945 24.99733450742848 25.284517361752982 24.501974765647592 41 24.403710399812226 25.390987253842372 25.61067188673355 24.594630459611857 42 25.64636740254152 25.226104905312457 25.037182377355684 24.09034531479034 43 24.94463880415215 24.499141297419445 25.385150543333605 25.171069355094804 44 24.67525394815262 24.945866070010915 24.936431463721636 25.44244851811483 45 24.76704906313377 25.1463517904316 25.085985512093202 25.000613634341434 46 24.73742384275115 25.14341686117463 24.926038396369766 25.193120899704464 47 24.699011432042855 24.99593466001485 25.381835140492015 24.92321876745028 48 25.452675244344146 25.422069902906664 24.592734184555578 24.532520668193612 49 24.753110141065672 25.56685911611321 24.800743104917547 24.879287637903566 50 24.563284779590553 25.573171947749117 24.95969195603317 24.903851316627165 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 19.0 2 12.0 3 75.0 4 138.0 5 156.0 6 174.0 7 188.0 8 202.0 9 261.0 10 320.0 11 505.0 12 690.0 13 1255.5 14 1821.0 15 2522.0 16 3223.0 17 3504.5 18 3786.0 19 3930.5 20 4075.0 21 4679.5 22 5284.0 23 6025.5 24 6767.0 25 8024.0 26 9281.0 27 11352.0 28 13423.0 29 15265.5 30 17108.0 31 18772.0 32 20436.0 33 23048.5 34 25661.0 35 29275.5 36 32890.0 37 39805.5 38 46721.0 39 51656.5 40 56592.0 41 63323.0 42 70054.0 43 70929.5 44 71805.0 45 78443.0 46 85081.0 47 90173.0 48 95265.0 49 98463.0 50 101661.0 51 98612.5 52 95564.0 53 94949.0 54 94334.0 55 94227.5 56 94121.0 57 90420.0 58 86719.0 59 79613.5 60 72508.0 61 63871.0 62 55234.0 63 47989.5 64 40745.0 65 34738.5 66 28732.0 67 24508.0 68 20284.0 69 18636.0 70 16988.0 71 13424.0 72 9860.0 73 8209.5 74 6559.0 75 5001.0 76 3443.0 77 2975.0 78 2507.0 79 2048.0 80 1589.0 81 1255.0 82 921.0 83 744.5 84 568.0 85 399.0 86 230.0 87 170.0 88 110.0 89 96.5 90 83.0 91 63.0 92 43.0 93 33.5 94 24.0 95 25.5 96 27.0 97 23.5 98 20.0 99 19.5 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00813053029466269 2 3.835155799369193E-4 3 4.602186959243032E-4 4 0.0 5 0.0 6 2.301093479621516E-4 7 7.670311598738388E-5 8 0.0 9 0.0012272498557981421 10 6.903280438864548E-4 11 0.0 12 1.5340623197476777E-4 13 8.437342758612226E-4 14 7.670311598738388E-5 15 0.003911858915356578 16 5.369218119116871E-4 17 0.0 18 2.301093479621516E-4 19 0.0 20 7.670311598738386E-4 21 0.0 22 7.670311598738388E-5 23 5.369218119116871E-4 24 4.602186959243032E-4 25 0.0019175778996845967 26 0.0046021869592430325 27 0.005752733699053791 28 0.0038351557993691935 29 0.0023010934796215163 30 0.0036817495673944255 31 0.007363499134788851 32 0.002991421523507971 33 0.0038351557993691935 34 0.0024544997115962842 35 0.0026846090595584356 36 0.007056686670839317 37 0.0036817495673944255 38 0.007977124062687923 39 0.0036817495673944255 40 0.002224390363634132 41 0.003144827755482739 42 0.0014573592037602934 43 0.001303952971785526 44 0.001303952971785526 45 0.0015340623197476772 46 8.437342758612226E-4 47 0.0018408747836972127 48 0.002607905943571052 49 6.903280438864548E-4 50 0.0013806560877729097 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1303728.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.97794791496526 #Duplication Level Percentage of deduplicated Percentage of total 1 77.97529466610935 44.428722781396466 2 13.387430116600168 15.255765917977637 3 3.9535660861415183 6.757982476036335 4 1.6454069037706516 3.7500763544787383 5 0.8559171906360267 2.438420255379146 6 0.5074971327489525 1.7349687118058412 7 0.31503691629578046 1.2565109905594574 8 0.2214567260480343 1.00945198417469 9 0.16415668140956557 0.8417979758922997 >10 0.8203214955193163 8.523368688027782 >50 0.07627344611186332 3.0147227405534447 >100 0.07019004652396771 7.936255042618592 >500 0.0066395820392605364 2.530429055351402 >1k 8.130100456237392E-4 0.5215270257482447 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.3010934796215162E-4 0.0 10 0.0 0.0 0.0 2.3010934796215162E-4 0.0 11 0.0 0.0 0.0 2.3010934796215162E-4 0.0 12 0.0 7.670311598738387E-5 0.0 3.068124639495355E-4 7.670311598738387E-5 13 0.0 7.670311598738387E-5 0.0 5.369218119116871E-4 7.670311598738387E-5 14 0.0 1.5340623197476774E-4 0.0 5.369218119116871E-4 7.670311598738387E-5 15 0.0 1.5340623197476774E-4 0.0 5.369218119116871E-4 7.670311598738387E-5 16 0.0 1.5340623197476774E-4 0.0 5.369218119116871E-4 7.670311598738387E-5 17 0.0 2.3010934796215162E-4 0.0 5.369218119116871E-4 7.670311598738387E-5 18 0.0 2.3010934796215162E-4 0.0 5.369218119116871E-4 7.670311598738387E-5 19 0.0 2.3010934796215162E-4 0.0 6.903280438864548E-4 7.670311598738387E-5 20 0.0 2.3010934796215162E-4 0.0 7.670311598738387E-4 7.670311598738387E-5 21 0.0 2.3010934796215162E-4 0.0 0.0010738436238233741 7.670311598738387E-5 22 0.0 2.3010934796215162E-4 0.0 0.0016874685517224452 7.670311598738387E-5 23 0.0 2.3010934796215162E-4 0.0 0.0020709841316593645 7.670311598738387E-5 24 0.0 3.8351557993691936E-4 0.0 0.002607905943571052 7.670311598738387E-5 25 0.0 3.8351557993691936E-4 0.0 0.0029147184075205873 7.670311598738387E-5 26 0.0 3.8351557993691936E-4 0.0 0.003528343335419658 7.670311598738387E-5 27 0.0 3.8351557993691936E-4 0.0 0.004908999423192568 7.670311598738387E-5 28 0.0 3.8351557993691936E-4 0.0 0.009281077034473449 7.670311598738387E-5 29 0.0 3.8351557993691936E-4 0.0 0.016721279285249684 7.670311598738387E-5 30 0.0 3.8351557993691936E-4 0.0 0.029990918351067094 7.670311598738387E-5 31 0.0 3.8351557993691936E-4 0.0 0.05676030583066406 7.670311598738387E-5 32 0.0 3.8351557993691936E-4 0.0 0.08445013070210965 7.670311598738387E-5 33 0.0 3.8351557993691936E-4 0.0 0.10868831535412295 7.670311598738387E-5 34 0.0 3.8351557993691936E-4 0.0 0.13668495268951805 7.670311598738387E-5 35 0.0 3.8351557993691936E-4 0.0 0.1698206987960679 7.670311598738387E-5 36 0.0 3.8351557993691936E-4 0.0 0.2172999275922585 7.670311598738387E-5 37 0.0 3.8351557993691936E-4 0.0 0.2847986696611563 7.670311598738387E-5 38 0.0 4.6021869592430324E-4 0.0 0.3765355963820674 7.670311598738387E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2540 0.0 21.740005 1 AATACGA 330 0.0 21.333185 39 CGCAATA 330 0.0 20.668108 36 CAATACG 330 0.0 20.666523 38 CGAATGC 325 0.0 20.30677 43 ATACGAA 350 0.0 20.113373 40 GTACGGA 110 1.2659257E-7 19.999863 12 TACGGAC 115 2.0218431E-7 19.1303 13 CTAGCGG 335 0.0 19.045374 29 TACTATA 190 1.8189894E-12 18.525476 2 TAGACCG 60 0.007412706 18.333204 5 TTAGAAC 290 0.0 18.20677 3 TACGAAT 380 0.0 17.946556 41 GGTATCA 1275 0.0 17.772425 1 GTATTAG 360 0.0 17.7221 1 TCTAGCG 365 0.0 17.480001 28 ATTACAC 220 1.8189894E-12 16.999882 3 GGCGCAA 600 0.0 16.867844 34 CGGCGCA 620 0.0 16.678583 33 TAGCGGC 390 0.0 16.360743 30 >>END_MODULE