##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064239_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1246755 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27746429731583 32.0 32.0 32.0 32.0 32.0 2 31.396017661850163 32.0 32.0 32.0 32.0 32.0 3 31.465080950146582 32.0 32.0 32.0 32.0 32.0 4 31.542846830371644 32.0 32.0 32.0 32.0 32.0 5 31.499797474243135 32.0 32.0 32.0 32.0 32.0 6 35.06175792356959 36.0 36.0 36.0 36.0 36.0 7 35.07338089680811 36.0 36.0 36.0 36.0 36.0 8 35.02915649024869 36.0 36.0 36.0 36.0 36.0 9 35.119917706365726 36.0 36.0 36.0 36.0 36.0 10 34.987300632441816 36.0 36.0 36.0 36.0 36.0 11 35.121508235379046 36.0 36.0 36.0 36.0 36.0 12 35.02891987599809 36.0 36.0 36.0 36.0 36.0 13 35.067281863718215 36.0 36.0 36.0 36.0 36.0 14 35.008891081246915 36.0 36.0 36.0 36.0 36.0 15 34.991918219698334 36.0 36.0 36.0 36.0 36.0 16 35.00014678104359 36.0 36.0 36.0 36.0 36.0 17 34.96297027082306 36.0 36.0 36.0 36.0 36.0 18 34.95649666534323 36.0 36.0 36.0 36.0 36.0 19 34.951353714242174 36.0 36.0 36.0 36.0 36.0 20 34.94863064515482 36.0 36.0 36.0 36.0 36.0 21 34.94647865859772 36.0 36.0 36.0 36.0 36.0 22 34.928836058407626 36.0 36.0 36.0 36.0 36.0 23 34.88033494952898 36.0 36.0 36.0 32.0 36.0 24 34.84821556761352 36.0 36.0 36.0 32.0 36.0 25 34.82144928233695 36.0 36.0 36.0 32.0 36.0 26 34.75726666426042 36.0 36.0 36.0 32.0 36.0 27 34.75789148629843 36.0 36.0 36.0 32.0 36.0 28 34.736591391251686 36.0 36.0 36.0 32.0 36.0 29 34.70378221863959 36.0 36.0 36.0 32.0 36.0 30 34.68800044916603 36.0 36.0 36.0 32.0 36.0 31 34.678308889878124 36.0 36.0 36.0 32.0 36.0 32 34.62975083316289 36.0 36.0 36.0 32.0 36.0 33 34.60897529987849 36.0 36.0 36.0 32.0 36.0 34 34.5820590252295 36.0 36.0 36.0 32.0 36.0 35 34.53907704400624 36.0 36.0 36.0 32.0 36.0 36 34.51680562740875 36.0 36.0 36.0 32.0 36.0 37 34.50616039237862 36.0 36.0 36.0 32.0 36.0 38 34.47067306728267 36.0 36.0 36.0 32.0 36.0 39 34.46541622050844 36.0 36.0 36.0 32.0 36.0 40 34.4350790652534 36.0 36.0 36.0 32.0 36.0 41 34.410354079189574 36.0 36.0 36.0 32.0 36.0 42 34.34032267767123 36.0 36.0 36.0 32.0 36.0 43 34.31767107410838 36.0 36.0 36.0 32.0 36.0 44 34.25922976045815 36.0 36.0 36.0 32.0 36.0 45 34.22151505307779 36.0 36.0 36.0 32.0 36.0 46 34.18406423074301 36.0 36.0 36.0 32.0 36.0 47 34.15584457251023 36.0 36.0 36.0 32.0 36.0 48 34.09941969352439 36.0 36.0 36.0 32.0 36.0 49 34.06167611118464 36.0 36.0 36.0 32.0 36.0 50 33.48168084346965 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 15.0 21 66.0 22 196.0 23 455.0 24 1255.0 25 2822.0 26 5695.0 27 10157.0 28 16557.0 29 24447.0 30 33848.0 31 46639.0 32 66675.0 33 102026.0 34 206848.0 35 729048.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.29198545230528 18.45654541983447 11.956125898201432 26.29534322965882 2 16.03152195708843 21.034850611590134 36.49440545418087 26.439221977140566 3 18.099954361302874 24.935572436793613 28.86122226687168 28.10325093503183 4 12.512241779659997 16.046617017778154 35.92662551984953 35.51451568271232 5 14.36737771254176 36.66566406390991 33.2147053751539 15.752252848394432 6 33.76945251428911 35.760462769720405 16.791042980411532 13.67904173557895 7 29.499644677298008 30.74447725854499 21.324415241499125 18.431462822657878 8 27.990743971349623 32.53670528692486 19.84960958648652 19.622941155239 9 27.53095084360349 14.048374353812157 18.82862035637084 39.59205444621351 10 16.12720815179379 26.723770076294734 31.35094293616011 25.798078835751365 11 36.97249016245386 21.42218914076073 22.521042643536738 19.084278053248678 12 24.717486142002464 23.85773284684296 28.757500483255306 22.667280527899273 13 29.273437775717305 19.531693654210795 25.6771215995534 25.517746970518502 14 23.883158893541864 19.441701764503474 25.46302274788992 31.212116594064742 15 25.116448822276677 26.894283640213846 22.628811608385437 25.360455929124036 16 25.645319896755232 25.82931888291601 23.65798647037969 24.867374749949068 17 23.778147092369466 25.809181281952974 25.447923166879754 24.964748458797807 18 24.707740358740438 24.954221011252447 26.302445315864997 24.03559331414212 19 25.415578842675586 24.75402143965735 25.975111389166276 23.855288328500787 20 25.766334308404193 24.165528371032778 25.304331993580092 24.76380532698294 21 26.82082686654555 24.18342015873207 24.82115572024977 24.17459725447261 22 25.82562398035218 24.026792775479365 25.46805544638317 24.67952779778529 23 24.50537278212821 23.948964785958978 25.913196502578312 25.6324659293345 24 24.71710401781274 24.79209912508382 25.665250716263433 24.82554614084001 25 24.91824659090089 24.230130332219225 25.78442766998974 25.067195406890146 26 24.74741073949537 25.000481275186736 26.01123937986088 24.24086860545702 27 25.00557479774313 24.66715650021417 25.46286863851407 24.86440006352863 28 24.48739122378803 24.55974159207707 26.20839954087194 24.744467643262954 29 24.372114437517848 24.69287508702808 25.95177441037471 24.98323606507936 30 24.437056079826423 24.938297351819397 26.066150372381596 24.558496195972584 31 24.994344898617268 24.827178497459617 25.081136667356507 25.09733993656661 32 24.664619155750664 24.912790954162013 25.16288780854035 25.259702081546976 33 24.47208715474909 24.559758466738643 25.553339932076792 25.414814446435475 34 25.14810839946676 24.442899058490987 25.784818107003804 24.624174435038444 35 25.653855192942128 24.467783890702087 25.612466622443996 24.26589429391179 36 24.639755120113712 25.240083038410077 25.155616804047966 24.96454503742825 37 25.340236864374493 24.891854929594412 25.388925206845244 24.37898299918585 38 24.654472881636007 24.832711130505373 25.68227066865814 24.83054531920048 39 25.040747442857324 24.619877693502225 25.14470154904452 25.194673314595928 40 25.29274605788427 24.98257440069173 25.394933461883056 24.329746079540943 41 24.389136605762808 25.27089103478811 25.76651194054153 24.573460418907548 42 25.40281440699174 25.397360129875963 25.257153124017428 23.942672339114868 43 24.824422092818068 24.52957312671447 25.487030174695608 25.158974605771856 44 24.572427284765872 25.003629445268366 25.151373935529826 25.272569334435936 45 24.75341710908681 25.131522906521887 25.23459162729067 24.880468357100632 46 24.54806351895254 25.128534601274037 25.127171051681742 25.196230828091686 47 24.667249524756762 25.02330095529906 25.507206853127784 24.80224266681639 48 25.46142302210323 25.5382633602328 24.571181985673046 24.429131631990927 49 24.563505813505813 25.58728600395267 24.834530042863374 25.014678139678136 50 24.74024213587779 25.687754764834313 24.63260123618595 24.93940186310195 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 53.0 1 47.0 2 41.0 3 122.0 4 203.0 5 259.5 6 316.0 7 329.5 8 343.0 9 489.5 10 636.0 11 884.5 12 1133.0 13 2081.5 14 3030.0 15 3967.0 16 4904.0 17 5119.0 18 5334.0 19 5158.0 20 4982.0 21 5378.0 22 5774.0 23 6257.5 24 6741.0 25 7522.5 26 8304.0 27 10013.5 28 11723.0 29 13404.0 30 15085.0 31 16810.5 32 18536.0 33 21309.5 34 24083.0 35 28098.5 36 32114.0 37 38238.0 38 44362.0 39 49107.5 40 53853.0 41 58774.5 42 63696.0 43 65928.5 44 68161.0 45 74611.0 46 81061.0 47 86253.0 48 91445.0 49 94295.0 50 97145.0 51 94919.5 52 92694.0 53 91693.0 54 90692.0 55 91274.0 56 91856.0 57 88551.0 58 85246.0 59 77979.5 60 70713.0 61 61649.0 62 52585.0 63 45503.0 64 38421.0 65 32304.0 66 26187.0 67 22235.5 68 18284.0 69 16261.5 70 14239.0 71 11053.5 72 7868.0 73 6784.0 74 5700.0 75 4423.5 76 3147.0 77 2742.5 78 2338.0 79 1977.0 80 1616.0 81 1278.0 82 940.0 83 785.5 84 631.0 85 449.5 86 268.0 87 185.5 88 103.0 89 79.5 90 56.0 91 50.0 92 44.0 93 33.0 94 22.0 95 21.0 96 20.0 97 17.0 98 14.0 99 13.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00778019739243075 2 4.01041102702616E-4 3 4.8124932324313923E-4 4 0.0 5 0.0 6 8.02082205405232E-5 7 8.02082205405232E-5 8 0.0 9 0.001604164410810464 10 8.822904259457551E-4 11 8.02082205405232E-5 12 1.604164410810464E-4 13 5.614575437836624E-4 14 1.604164410810464E-4 15 0.005614575437836624 16 7.218739848647088E-4 17 8.02082205405232E-5 18 3.208328821620928E-4 19 0.0 20 6.416657643241856E-4 21 0.0 22 8.02082205405232E-5 23 6.416657643241856E-4 24 5.614575437836624E-4 25 0.0014437479697294176 26 0.005373950776215055 27 0.005855200099458194 28 0.0035291617037830204 29 0.0024864548367562194 30 0.00401041102702616 31 0.007459364510268657 32 0.0030479123805398816 33 0.00425103568864773 34 0.0026468712778372656 35 0.002727079498377789 36 0.008261446715673889 37 0.00401041102702616 38 0.008742696038917029 39 0.0040906192475666835 40 0.0020854137340536034 41 0.0028874959394588353 42 0.0021656219545941264 43 0.001203123308107848 44 6.416657643241856E-4 45 0.0011229150875673249 46 7.218739848647088E-4 47 0.00200520551351308 48 0.0011229150875673249 49 2.4062466162156962E-4 50 0.0013635397491888945 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1246755.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.84874838413112 #Duplication Level Percentage of deduplicated Percentage of total 1 78.95335936061028 44.88399660373217 2 12.594249720317677 14.319346668745068 3 3.657518181892652 6.237759924984003 4 1.5464042969231933 3.516445951037032 5 0.8344300658428165 2.371815242862612 6 0.5189324412556457 1.7700395868783063 7 0.3505613664355197 1.3950282439583033 8 0.256840876544718 1.1680865892360286 9 0.19130531628234665 0.9787921010893571 >10 0.9500784271611149 9.587205833587154 >50 0.07177943330655333 2.861815104431334 >100 0.06715746092892769 7.751699087991404 >500 0.006247198267937493 2.4233830824662057 >1k 0.0011358542305340898 0.7345859790009637 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1291 0.10354881271781545 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1259 0.1009821496605187 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.02082205405232E-5 2 8.02082205405232E-5 0.0 0.0 0.0 8.02082205405232E-5 3 8.02082205405232E-5 0.0 0.0 0.0 8.02082205405232E-5 4 8.02082205405232E-5 0.0 0.0 0.0 1.604164410810464E-4 5 8.02082205405232E-5 0.0 0.0 0.0 1.604164410810464E-4 6 8.02082205405232E-5 0.0 0.0 0.0 3.208328821620928E-4 7 8.02082205405232E-5 0.0 0.0 0.0 3.208328821620928E-4 8 8.02082205405232E-5 0.0 0.0 0.0 3.208328821620928E-4 9 8.02082205405232E-5 0.0 0.0 0.0 4.01041102702616E-4 10 8.02082205405232E-5 0.0 0.0 0.0 4.01041102702616E-4 11 8.02082205405232E-5 0.0 0.0 0.0 4.01041102702616E-4 12 8.02082205405232E-5 0.0 0.0 0.0 4.812493232431392E-4 13 8.02082205405232E-5 0.0 0.0 0.0 4.812493232431392E-4 14 2.406246616215696E-4 0.0 0.0 0.0 4.812493232431392E-4 15 2.406246616215696E-4 0.0 0.0 0.0 4.812493232431392E-4 16 2.406246616215696E-4 0.0 0.0 0.0 4.812493232431392E-4 17 2.406246616215696E-4 0.0 0.0 8.02082205405232E-5 5.614575437836624E-4 18 2.406246616215696E-4 0.0 0.0 8.02082205405232E-5 5.614575437836624E-4 19 2.406246616215696E-4 0.0 0.0 8.02082205405232E-5 5.614575437836624E-4 20 2.406246616215696E-4 0.0 0.0 8.02082205405232E-5 6.416657643241856E-4 21 2.406246616215696E-4 0.0 0.0 8.02082205405232E-5 6.416657643241856E-4 22 2.406246616215696E-4 0.0 0.0 1.604164410810464E-4 6.416657643241856E-4 23 2.406246616215696E-4 0.0 0.0 4.812493232431392E-4 7.218739848647088E-4 24 2.406246616215696E-4 0.0 0.0 7.218739848647088E-4 7.218739848647088E-4 25 2.406246616215696E-4 0.0 0.0 9.624986464862784E-4 7.218739848647088E-4 26 2.406246616215696E-4 0.0 0.0 0.001203123308107848 8.02082205405232E-4 27 2.406246616215696E-4 0.0 0.0 0.0018447890724320336 8.02082205405232E-4 28 3.208328821620928E-4 0.0 0.0 0.005774991878917671 8.02082205405232E-4 29 3.208328821620928E-4 0.0 0.0 0.012191649522159526 8.02082205405232E-4 30 3.208328821620928E-4 0.0 0.0 0.024142674382697484 8.02082205405232E-4 31 3.208328821620928E-4 0.0 0.0 0.05021034605836752 8.02082205405232E-4 32 3.208328821620928E-4 0.0 0.0 0.07828322324755065 8.02082205405232E-4 33 3.208328821620928E-4 0.0 0.0 0.1030675633945723 8.02082205405232E-4 34 3.208328821620928E-4 0.0 0.0 0.1286539857469992 8.02082205405232E-4 35 3.208328821620928E-4 0.0 0.0 0.16065706574266797 8.02082205405232E-4 36 3.208328821620928E-4 0.0 0.0 0.20942366383130606 8.02082205405232E-4 37 3.208328821620928E-4 0.0 0.0 0.2776006512907508 8.02082205405232E-4 38 3.208328821620928E-4 0.0 0.0 0.3711234364410008 8.02082205405232E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGC 45 0.0013975478 24.446518 23 CGTCTTA 65 1.8145127E-5 23.690514 15 GTATCAA 2585 0.0 20.425625 1 AGGTACG 55 0.004481489 20.001696 22 GCGGATA 55 0.004486693 19.997684 2 CTATTAG 80 8.988545E-5 19.250088 1 CGCAATA 355 0.0 19.213667 36 TAGCGGC 390 0.0 18.616964 30 CTAGCGG 370 0.0 18.433256 29 TCTAGCG 390 0.0 17.48796 28 TACGAAT 390 0.0 17.486557 41 GCCGGTC 445 0.0 17.302061 8 GTATTAT 130 7.316903E-7 16.923153 1 ATACGAA 405 0.0 16.83891 40 CGCCGGT 445 0.0 16.807716 7 AACGCAG 3140 0.0 16.743956 6 TAACGCC 355 0.0 16.731129 4 CGAATGC 400 0.0 16.49875 43 TGGTCGG 380 0.0 16.212551 37 CGGTCCA 435 0.0 16.183332 10 >>END_MODULE