##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064238_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1094796 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276547411572565 32.0 32.0 32.0 32.0 32.0 2 31.388863313347876 32.0 32.0 32.0 32.0 32.0 3 31.457908139963976 32.0 32.0 32.0 32.0 32.0 4 31.547196920704863 32.0 32.0 32.0 32.0 32.0 5 31.493220654806922 32.0 32.0 32.0 32.0 32.0 6 35.05727551068875 36.0 36.0 36.0 36.0 36.0 7 35.06982305379267 36.0 36.0 36.0 36.0 36.0 8 35.029965399946654 36.0 36.0 36.0 36.0 36.0 9 35.12137238353081 36.0 36.0 36.0 36.0 36.0 10 34.98513513019777 36.0 36.0 36.0 36.0 36.0 11 35.12895279120494 36.0 36.0 36.0 36.0 36.0 12 35.02168623195554 36.0 36.0 36.0 36.0 36.0 13 35.07789761745567 36.0 36.0 36.0 36.0 36.0 14 35.01034621975236 36.0 36.0 36.0 36.0 36.0 15 34.98851384184816 36.0 36.0 36.0 36.0 36.0 16 34.99427747269811 36.0 36.0 36.0 36.0 36.0 17 34.95419146580733 36.0 36.0 36.0 36.0 36.0 18 34.95450567959693 36.0 36.0 36.0 36.0 36.0 19 34.95047661847504 36.0 36.0 36.0 36.0 36.0 20 34.95013408890789 36.0 36.0 36.0 36.0 36.0 21 34.938041425069144 36.0 36.0 36.0 36.0 36.0 22 34.921876769736095 36.0 36.0 36.0 32.0 36.0 23 34.864205751573806 36.0 36.0 36.0 32.0 36.0 24 34.83945319493312 36.0 36.0 36.0 32.0 36.0 25 34.80714215251061 36.0 36.0 36.0 32.0 36.0 26 34.74482277976902 36.0 36.0 36.0 32.0 36.0 27 34.74851661862119 36.0 36.0 36.0 32.0 36.0 28 34.7169070767522 36.0 36.0 36.0 32.0 36.0 29 34.68917040252248 36.0 36.0 36.0 32.0 36.0 30 34.65799199120202 36.0 36.0 36.0 32.0 36.0 31 34.6546187600247 36.0 36.0 36.0 32.0 36.0 32 34.60599052243523 36.0 36.0 36.0 32.0 36.0 33 34.58205638310699 36.0 36.0 36.0 32.0 36.0 34 34.57623520728976 36.0 36.0 36.0 32.0 36.0 35 34.52253570528208 36.0 36.0 36.0 32.0 36.0 36 34.48762965885882 36.0 36.0 36.0 32.0 36.0 37 34.48019631054552 36.0 36.0 36.0 32.0 36.0 38 34.42650228901092 36.0 36.0 36.0 32.0 36.0 39 34.43075056905579 36.0 36.0 36.0 32.0 36.0 40 34.394724679300985 36.0 36.0 36.0 32.0 36.0 41 34.382494090223204 36.0 36.0 36.0 32.0 36.0 42 34.29598664956759 36.0 36.0 36.0 32.0 36.0 43 34.28114735530637 36.0 36.0 36.0 32.0 36.0 44 34.2081602417254 36.0 36.0 36.0 32.0 36.0 45 34.1845037796996 36.0 36.0 36.0 32.0 36.0 46 34.138033021677096 36.0 36.0 36.0 32.0 36.0 47 34.10702267819758 36.0 36.0 36.0 32.0 36.0 48 34.04507871786159 36.0 36.0 36.0 32.0 36.0 49 34.02042572314842 36.0 36.0 36.0 32.0 36.0 50 33.41667032031538 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 3.0 20 13.0 21 46.0 22 136.0 23 393.0 24 1103.0 25 2229.0 26 4709.0 27 8481.0 28 14007.0 29 21130.0 30 30180.0 31 42311.0 32 59502.0 33 95120.0 34 192177.0 35 623253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.41454636139995 18.415574046787548 12.115268847064884 26.054610744747613 2 15.874781808067825 20.961496830907763 36.79115595368257 26.372565407341845 3 17.985018117646415 24.8551090666786 29.014906068657982 28.144966747017 4 12.130296420520352 16.253438996854207 36.14554675026215 35.47071783236329 5 14.178714573308634 37.00872125948578 33.20445087486619 15.608113292339395 6 33.674950424418135 36.301017635297264 16.660135751690046 13.363896188594557 7 29.582707264830404 30.827780543389398 21.192460688987435 18.39705150279276 8 27.9843002714661 32.61466063083899 19.698373030226634 19.70266606746828 9 27.63868806158697 13.795046845156595 18.59849083420642 39.96777425905002 10 16.002806035533983 26.622262128659287 31.323559098013032 26.0513727377937 11 37.62107278433608 21.000350750276763 22.413764756173755 18.964811709213407 12 24.876620737215642 23.87798628967067 28.721998182308106 22.523394790805582 13 29.446834552745276 19.252185350615186 25.43930799514062 25.861672101498918 14 23.72501128066102 19.980745236090076 25.270324828232525 31.023918655016374 15 25.171456862659124 27.32302582540448 22.451166308589467 25.054351003346927 16 25.63916601052626 25.62363786164602 23.994369675900128 24.74282645192759 17 23.734650108330683 25.72196098633901 25.336592387988265 25.206796517342045 18 24.866070572245164 24.648038487641042 26.550955294745215 23.934935645368576 19 25.671540634054196 24.451770010120608 25.581934899287173 24.294754456538023 20 25.9181923059006 23.948128722756117 25.086797705855112 25.046881265488175 21 27.35961768219833 23.924091794270346 24.54320256924578 24.173087954285545 22 26.146999746983674 23.98329909544379 25.172475842421065 24.697225315151478 23 24.427217349128185 23.815134816178855 25.82347068425182 25.934177150441133 24 24.89940984061769 24.82925933673064 25.504092569435755 24.76723825321592 25 24.891895496239407 24.192116363742656 25.736270682350877 25.17971745766706 26 24.61027062281796 25.337935973487625 26.027053147157208 24.024740256537207 27 25.27349359290561 24.511109649555504 25.154924894311257 25.06047186322763 28 24.315661301328255 24.672914099473576 26.09863684901388 24.91278775018429 29 24.25909027383859 24.542255032796874 25.93615639463668 25.26249829872786 30 24.191846715548497 25.121648889380122 26.180521745167155 24.505982649904222 31 25.184271705421047 24.69190611254984 24.88026563991541 25.243556542113698 32 24.8416085410813 24.786710463336124 24.7360142351355 25.63566676044708 33 24.389695827597578 24.372431470092014 25.583950907109536 25.653921795200873 34 25.196001684385905 24.509093765671228 25.77603696149205 24.518867588450814 35 25.809583835726553 24.35775877817969 25.798439840695675 24.03421754539808 36 24.45202232195464 25.210672810167466 25.19185498950861 25.14544987836928 37 25.580314080266582 24.93331823097834 25.033706264067114 24.452661424687967 38 24.503679073357663 24.795264477644665 25.479923815091738 25.221132633905942 39 25.3785128043517 24.536124850992696 24.83318032966581 25.252182014989792 40 25.680535421821894 24.889679318720127 25.430892348389563 23.998892911068424 41 24.445491863925596 25.229412269788465 25.92956956540008 24.395526300885862 42 25.942645225230986 25.567313533041336 25.070951300050698 23.419089941676983 43 24.802906146697566 24.46667513105337 25.496833619082505 25.23358510316656 44 24.390745172546083 25.223880597014926 24.94729534701036 25.438078883428634 45 24.587245462326187 25.35863402568007 25.144252858339446 24.9098676536543 46 24.24934690074718 25.065401267834638 25.129615082482324 25.55563674893586 47 24.736313754433592 24.796874586099143 25.62691422010346 24.83989743936381 48 25.62040315243722 25.38062719908803 24.36626073739555 24.632708911079202 49 24.593187192806663 25.81405948715326 24.656669629180364 24.936083690859718 50 24.743417831592946 25.903746519836023 24.50272932545105 24.85010632311998 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 214.0 1 136.5 2 59.0 3 146.5 4 234.0 5 256.5 6 279.0 7 266.5 8 254.0 9 362.0 10 470.0 11 668.5 12 867.0 13 1541.0 14 2215.0 15 3032.0 16 3849.0 17 4102.5 18 4356.0 19 4345.0 20 4334.0 21 4732.0 22 5130.0 23 5716.5 24 6303.0 25 6971.0 26 7639.0 27 9413.0 28 11187.0 29 13007.5 30 14828.0 31 16445.5 32 18063.0 33 20839.5 34 23616.0 35 27280.5 36 30945.0 37 35871.5 38 40798.0 39 44134.0 40 47470.0 41 51216.5 42 54963.0 43 55578.5 44 56194.0 45 61876.0 46 67558.0 47 72752.0 48 77946.0 49 80376.0 50 82806.0 51 79330.0 52 75854.0 53 75568.0 54 75282.0 55 76948.5 56 78615.0 57 77080.5 58 75546.0 59 69055.0 60 62564.0 61 55193.5 62 47823.0 63 41667.0 64 35511.0 65 30376.0 66 25241.0 67 21513.5 68 17786.0 69 16372.5 70 14959.0 71 11477.0 72 7995.0 73 6898.0 74 5801.0 75 4411.5 76 3022.0 77 2700.5 78 2379.0 79 1993.5 80 1608.0 81 1299.0 82 990.0 83 833.0 84 676.0 85 468.5 86 261.0 87 186.0 88 111.0 89 89.5 90 68.0 91 58.0 92 48.0 93 36.5 94 25.0 95 27.5 96 30.0 97 20.0 98 10.0 99 12.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009408145444448098 2 2.740236537217893E-4 3 6.393885253508416E-4 4 0.0 5 0.0 6 2.740236537217893E-4 7 9.13412179072631E-5 8 0.0 9 0.0017354831402379986 10 0.0011874358327944202 11 0.0 12 9.13412179072631E-5 13 5.480473074435786E-4 14 1.826824358145262E-4 15 0.005480473074435785 16 9.134121790726309E-4 17 0.0 18 2.740236537217893E-4 19 0.0 20 8.220709611653677E-4 21 0.0 22 4.5670608953631546E-4 23 8.220709611653677E-4 24 6.393885253508416E-4 25 0.002009506793959788 26 0.005663155510250311 27 0.006576567689322942 28 0.004841084549084944 29 0.0024662128834961033 30 0.004293037241641365 31 0.007398638650488311 32 0.0036536487162905236 33 0.00502376698489947 34 0.0031969426267542084 35 0.003288283844661471 36 0.008129368393746415 37 0.004019013587919576 38 0.00831205082956094 39 0.004658402113270417 40 0.003014260190939682 41 0.0038363311521050496 42 0.0028315777551251556 43 0.0011874358327944202 44 0.0014614594865162095 45 0.0015528007044234725 46 0.0014614594865162095 47 0.0026488953193106297 48 0.0021921892297743144 49 4.5670608953631546E-4 50 0.0018268243581452618 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1094796.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.77158290067955 #Duplication Level Percentage of deduplicated Percentage of total 1 75.9476399947416 40.07877180093472 2 14.26570244937052 15.056473988867674 3 4.638270270640026 7.343065923085125 4 1.9365349584713063 4.087760604041303 5 0.9805130058435384 2.5871611686533384 6 0.5219731314226493 1.6527209026078584 7 0.34402195278219516 1.2708208100629492 8 0.23612903812154587 0.9968722488391103 9 0.16994770986885854 0.8071568694112593 >10 0.7728750688203566 7.275411422531228 >50 0.08397456165215988 3.1360851374181875 >100 0.0886576367856009 9.94308978840909 >500 0.010624981142465026 3.751063419559148 >1k 0.0031352403371208274 2.0135459155789825 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1607 0.1467853371769718 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1458 0.1331754957087896 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1400 0.12787770507016832 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1389 0.12687295167318843 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1330 0.1214838198166599 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1258 0.11490725212733696 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1242 0.11344579264082075 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1241 0.11335445142291349 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1239 0.11317176898709898 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1211 0.11061421488569559 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1097 0.1002013160442676 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1095 0.10001863360845308 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.826824358145262E-4 2 0.0 0.0 0.0 0.0 1.826824358145262E-4 3 0.0 0.0 0.0 0.0 1.826824358145262E-4 4 0.0 0.0 0.0 0.0 1.826824358145262E-4 5 0.0 0.0 0.0 9.13412179072631E-5 2.7402365372178924E-4 6 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 7 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 8 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 9 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 10 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 11 0.0 0.0 0.0 9.13412179072631E-5 3.653648716290524E-4 12 0.0 0.0 0.0 9.13412179072631E-5 5.480473074435785E-4 13 0.0 0.0 0.0 1.826824358145262E-4 5.480473074435785E-4 14 0.0 0.0 0.0 1.826824358145262E-4 5.480473074435785E-4 15 0.0 0.0 0.0 1.826824358145262E-4 6.393885253508417E-4 16 0.0 0.0 0.0 1.826824358145262E-4 6.393885253508417E-4 17 0.0 0.0 0.0 1.826824358145262E-4 6.393885253508417E-4 18 0.0 0.0 0.0 2.7402365372178924E-4 6.393885253508417E-4 19 0.0 0.0 0.0 2.7402365372178924E-4 6.393885253508417E-4 20 0.0 0.0 0.0 2.7402365372178924E-4 6.393885253508417E-4 21 0.0 0.0 0.0 2.7402365372178924E-4 6.393885253508417E-4 22 0.0 0.0 0.0 5.480473074435785E-4 6.393885253508417E-4 23 0.0 0.0 0.0 0.0011874358327944202 6.393885253508417E-4 24 0.0 0.0 0.0 0.002922918973032419 7.307297432581048E-4 25 0.0 0.0 0.0 0.003196942626754208 7.307297432581048E-4 26 0.0 0.0 0.0 0.004201696023734102 8.220709611653678E-4 27 0.0 0.0 0.0 0.005206449420713996 9.134121790726309E-4 28 0.0 0.0 0.0 0.009225463008633573 9.134121790726309E-4 29 0.0 0.0 0.0 0.01945567941424704 9.134121790726309E-4 30 0.0 0.0 0.0 0.0383633115210505 9.134121790726309E-4 31 0.0 0.0 0.0 0.073255656761625 9.134121790726309E-4 32 0.0 0.0 0.0 0.11244103924384086 0.001096094614887157 33 0.0 0.0 0.0 0.14815545544558073 0.001096094614887157 34 0.0 0.0 0.0 0.18743217914570387 0.0011874358327944202 35 0.0 0.0 0.0 0.23173266983072646 0.0011874358327944202 36 0.0 0.0 0.0 0.28936897833020947 0.0011874358327944202 37 0.0 0.0 0.0 0.3738596048944278 0.0011874358327944202 38 0.0 0.0 0.0 0.4964395193259749 0.0012787770507016833 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCTA 40 7.0314476E-4 27.500174 10 AGTCCGC 50 8.3403684E-5 26.400166 10 TATAGGG 85 2.3541725E-7 23.292135 2 TAATACC 120 5.984475E-10 22.000137 4 TTAGGAC 235 0.0 21.531065 3 TAGGACG 215 0.0 21.488504 4 GGCGTTA 430 0.0 20.974958 42 AGGACGT 245 0.0 19.755224 5 GTATAAT 150 4.656613E-10 19.067656 1 CGGCGTT 485 0.0 19.051666 41 GTATAGG 105 1.7914826E-6 18.858122 1 TAATACT 220 0.0 18.000113 4 GTATCAA 2490 0.0 17.848318 1 CGCCCCT 285 0.0 17.754496 5 GTATAAA 125 4.8488073E-7 17.600912 1 TAGGACA 200 3.6379788E-12 17.600111 4 ATGCGGC 510 0.0 17.256584 35 CTTATAT 90 2.2157987E-4 17.110435 3 CCTAATA 90 2.216572E-4 17.109653 2 CGCAATC 90 2.216572E-4 17.109653 44 >>END_MODULE