##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064237_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 635297 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1387351112944 32.0 32.0 32.0 32.0 32.0 2 30.922124612582778 32.0 32.0 32.0 32.0 32.0 3 30.952954287522214 32.0 32.0 32.0 32.0 32.0 4 30.929135506700018 32.0 32.0 32.0 32.0 32.0 5 30.950106800441368 32.0 32.0 32.0 32.0 32.0 6 34.466838344900104 36.0 36.0 36.0 32.0 36.0 7 34.38476019877317 36.0 36.0 36.0 32.0 36.0 8 34.3451456562836 36.0 36.0 36.0 32.0 36.0 9 34.419163005649324 36.0 36.0 36.0 32.0 36.0 10 34.239829560032554 36.0 36.0 36.0 32.0 36.0 11 34.44462511234903 36.0 36.0 36.0 32.0 36.0 12 34.31034933267432 36.0 36.0 36.0 32.0 36.0 13 34.38344900101842 36.0 36.0 36.0 32.0 36.0 14 34.30152511345087 36.0 36.0 36.0 32.0 36.0 15 34.26664851242805 36.0 36.0 36.0 32.0 36.0 16 34.24951321980113 36.0 36.0 36.0 32.0 36.0 17 34.18943265905553 36.0 36.0 36.0 32.0 36.0 18 34.17765076806596 36.0 36.0 36.0 32.0 36.0 19 34.17525189006087 36.0 36.0 36.0 32.0 36.0 20 34.10790386228803 36.0 36.0 36.0 32.0 36.0 21 34.07538993573085 36.0 36.0 36.0 32.0 36.0 22 34.07160587882518 36.0 36.0 36.0 32.0 36.0 23 34.054772807049304 36.0 36.0 36.0 32.0 36.0 24 34.02783579963387 36.0 36.0 36.0 32.0 36.0 25 33.4940697028319 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 6.0 5 14.0 6 20.0 7 6.0 8 34.0 9 49.0 10 68.0 11 18.0 12 44.0 13 36.0 14 106.0 15 211.0 16 353.0 17 424.0 18 552.0 19 742.0 20 863.0 21 1215.0 22 1590.0 23 2262.0 24 3046.0 25 4265.0 26 5958.0 27 7973.0 28 11298.0 29 15374.0 30 21145.0 31 29870.0 32 44660.0 33 67502.0 34 151363.0 35 264230.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.43697889192445 17.11887759520679 11.496460992181904 24.947682520686858 2 16.851263581096184 19.97849692565855 37.25226600845641 25.91797348478886 3 18.881230058225654 24.803277888576343 28.2321218598838 28.083370193314206 4 12.507634573125042 15.122436514982654 35.21301246088265 37.15691645100965 5 14.888522623697147 36.74133124278817 32.64398865942218 15.726157474092508 6 34.00382553663778 34.94100329814784 17.174455490747082 13.880715674467298 7 30.102652916633865 30.64787845390853 20.94953947886326 18.299929150594348 8 28.928741829473577 31.47953648255196 19.679178404458185 19.912543283516282 9 27.890294029639197 13.745688772697923 18.76198875537427 39.60202844228861 10 16.5450255777033 25.96640878965804 30.731358516241215 26.757207116397453 11 37.15135755764049 21.355525910852744 22.304138901007516 19.188977630499256 12 25.135967364682347 23.711479850998984 28.369415415147387 22.78313736917128 13 29.08192275040439 19.30420867439593 25.943648084825554 25.670220490374117 14 23.97418753258454 19.45653320984679 25.69370612408192 30.875573133486746 15 25.191404779567527 26.486861938129913 23.201047075889377 25.120686206413183 16 25.935119673897294 25.528436332478595 23.659142027305432 24.877301966318683 17 23.468548783407467 25.50040322072554 25.615699146936155 25.415348848930837 18 24.712709767159044 24.37985479142611 26.82184146147436 24.085593979940487 19 25.340997339441014 24.729651606968176 25.98384761880758 23.945503434783223 20 25.948108823390413 23.58338978244774 25.41297121882827 25.055530175333573 21 27.378413204497697 23.584546024504817 24.701093548661497 24.335947222335992 22 26.021616154933103 23.59503657040058 25.331165731730948 25.05218154293537 23 23.90135164939034 23.966413560603677 26.36803301931378 25.764201770692207 24 24.620832624462047 24.943762877828394 25.813941765436066 24.621462732273493 25 24.36858562865762 24.37567441970369 26.040595143390487 25.2151448082482 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 149.0 1 149.0 2 415.5 3 682.0 4 682.0 5 682.0 6 1980.5 7 3279.0 8 3279.0 9 3279.0 10 3027.5 11 2776.0 12 2776.0 13 2776.0 14 2247.0 15 1718.0 16 1718.0 17 1718.0 18 2962.5 19 4207.0 20 4207.0 21 4207.0 22 6594.0 23 8981.0 24 8981.0 25 8981.0 26 13218.0 27 17455.0 28 17455.0 29 17455.0 30 21330.0 31 25205.0 32 25205.0 33 25205.0 34 30940.5 35 36676.0 36 36676.0 37 36676.0 38 41880.0 39 47084.0 40 47084.0 41 47084.0 42 55957.5 43 64831.0 44 64831.0 45 64831.0 46 75348.0 47 85865.0 48 85865.0 49 85865.0 50 87035.0 51 88205.0 52 88205.0 53 88205.0 54 80616.0 55 73027.0 56 73027.0 57 73027.0 58 67236.5 59 61446.0 60 61446.0 61 61446.0 62 54743.0 63 48040.0 64 48040.0 65 48040.0 66 39928.0 67 31816.0 68 31816.0 69 31816.0 70 23831.5 71 15847.0 72 15847.0 73 15847.0 74 12087.5 75 8328.0 76 8328.0 77 8328.0 78 7073.5 79 5819.0 80 5819.0 81 5819.0 82 3859.5 83 1900.0 84 1900.0 85 1900.0 86 1496.0 87 1092.0 88 1092.0 89 1092.0 90 759.0 91 426.0 92 426.0 93 426.0 94 277.0 95 128.0 96 128.0 97 128.0 98 221.5 99 315.0 100 315.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03651835283339919 2 0.0061388610366490005 3 0.0015740669324741025 4 0.004564794104174898 5 0.008814774821854976 6 0.014481415778761744 7 0.023138783907369308 8 0.037777606379378464 9 0.051471988691903156 10 0.058083069808294384 11 0.0582404765015418 12 0.06327749068545893 13 0.06201823713947965 14 0.06453674423143821 15 0.060758983593500356 16 0.06374971076520115 17 0.0643793375381908 18 0.07649965291824139 19 0.073666332439788 20 0.079805193476437 21 0.07602743283849916 22 0.07775890646422066 23 0.08137926040891111 24 0.07634224622499397 25 0.07744409307772585 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 635297.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.21826005352163 #Duplication Level Percentage of deduplicated Percentage of total 1 71.14169412822649 30.03478543353559 2 15.16340696749211 12.803453173019275 3 5.4997866871093475 6.965742737858359 4 2.617872912871852 4.420881576907761 5 1.388340954140712 2.9306669722433463 6 0.8587891759470165 2.1753950856768416 7 0.5884405765748085 1.739005610151563 8 0.3840352710674856 1.2970640754921423 9 0.29938730929601903 1.1375650152525103 >10 1.7234939044803714 13.646862963140183 >50 0.16849938626584346 4.98215496046693 >100 0.1523983326506579 12.456177746334287 >500 0.011233292332972322 3.1627736299373064 >1k 0.0026211015443602086 2.24747101998394 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3220 0.5068495522566611 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2772 0.4363313536818213 No Hit TATCAACGCAGAGTACTTTTTTTTT 2319 0.36502612164074444 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1828 0.287739435256266 No Hit GTACATGGGGTGGTATCAACGCAAA 1498 0.23579522648462056 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1481 0.2331193126994146 No Hit GGTATCAACGCAGAGTACTTTTTTT 1099 0.1729899558789039 No Hit GTACATGGGTGGTATCAACGCAAAA 884 0.1391475168307107 No Hit GTATCAACGCAGAGTACATGGGGTG 868 0.1366290097387521 No Hit GCGCAAGACGGACCAGAGCGAAAGC 848 0.1334808758738039 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 822 0.12938830184937125 No Hit GAACTACGACGGTATCTGATCGTCT 818 0.1287586750763816 No Hit GTATCTGATCGTCTTCGAACCTCCG 807 0.12702720145066007 No Hit GAATAGGACCGCGGTTCTATTTTGT 794 0.12498091443844375 No Hit CTATTGGAGCTGGAATTACCGCGGC 749 0.11789761324231028 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 706 0.11112912543267166 No Hit GATTAAGAGGGACGGCCGGGGGCAT 699 0.11002727857993978 No Hit GTCCTATTCCATTATTCCTAGCTGC 693 0.10908283842045532 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 669 0.10530507778251748 No Hit GTACATGGAAGCAGTGGTATCAACG 661 0.10404582423653819 No Hit GAATAACGCCGCCGCATCGCCAGTC 648 0.10199953722432185 No Hit GTACATGGGGAATAATTGCAATCCC 646 0.10168472383782702 No Hit ATCAGATACCGTCGTAGTTCCGACC 643 0.1012125037580848 No Hit CTTTAATATACGCTATTGGAGCTGG 637 0.10026806359860034 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.148133864948205E-4 2 0.0 0.0 0.0 0.0 3.148133864948205E-4 3 0.0 0.0 0.0 0.0 3.148133864948205E-4 4 0.0 0.0 0.0 0.0 3.148133864948205E-4 5 0.0 0.0 0.0 0.0 3.148133864948205E-4 6 0.0 0.0 0.0 0.0 6.29626772989641E-4 7 0.0 0.0 0.0 0.0 6.29626772989641E-4 8 0.0 0.0 0.0 0.0 7.870334662370514E-4 9 0.0 0.0 0.0 0.0 9.444401594844616E-4 10 0.0 0.0 0.0 0.0 9.444401594844616E-4 11 0.0 0.0 0.0 0.0 9.444401594844616E-4 12 0.0 0.0 0.0 0.0 9.444401594844616E-4 13 0.0 0.0 0.0 0.0 9.444401594844616E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGATC 55 1.1292252E-5 15.541071 3 TCTAGAT 80 7.737981E-9 15.429501 2 TTCTCGT 65 3.3633733E-6 14.6158695 11 GTCCTAA 40 0.0052899546 14.243738 1 TAGGGTC 75 9.643154E-7 13.933796 4 ATCGCCA 175 0.0 13.572949 16 TCGCCAG 170 0.0 13.4122095 17 TATAGGG 85 2.7075475E-7 13.404815 2 CCTTATA 50 0.0015037055 13.293108 2 CGTCTTA 65 5.4368596E-5 13.155318 15 GCATCGC 175 0.0 13.030031 14 CCTATTC 165 0.0 12.663095 3 CTATTCC 215 0.0 12.372504 4 AGCGTAT 100 1.4365651E-7 12.3504095 8 GTCCTAT 200 0.0 12.344572 1 GCTCTTA 85 3.9523165E-6 12.288714 1 TATTCCA 225 0.0 12.244851 5 TTAGAGT 70 1.0886021E-4 12.214691 4 TTGGACT 55 0.003064245 12.09131 4 TAGACTC 95 1.0361291E-6 12.000399 5 >>END_MODULE