##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064237_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 635297 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.105923686086978 32.0 32.0 32.0 32.0 32.0 2 31.193972268088785 32.0 32.0 32.0 32.0 32.0 3 31.332584602162452 32.0 32.0 32.0 32.0 32.0 4 31.465065945534135 32.0 32.0 32.0 32.0 32.0 5 31.3415347467405 32.0 32.0 32.0 32.0 32.0 6 34.923841919606105 36.0 36.0 36.0 36.0 36.0 7 34.95775046946546 36.0 36.0 36.0 36.0 36.0 8 34.88877800461831 36.0 36.0 36.0 32.0 36.0 9 35.045797477400335 36.0 36.0 36.0 36.0 36.0 10 34.83774203246671 36.0 36.0 36.0 32.0 36.0 11 35.035481042724896 36.0 36.0 36.0 36.0 36.0 12 34.9129257654294 36.0 36.0 36.0 32.0 36.0 13 34.96922699147013 36.0 36.0 36.0 36.0 36.0 14 34.894172331995904 36.0 36.0 36.0 32.0 36.0 15 34.865200056036784 36.0 36.0 36.0 32.0 36.0 16 34.871691508066306 36.0 36.0 36.0 32.0 36.0 17 34.8298071610601 36.0 36.0 36.0 32.0 36.0 18 34.83392649422239 36.0 36.0 36.0 32.0 36.0 19 34.8241987605797 36.0 36.0 36.0 32.0 36.0 20 34.814585933823075 36.0 36.0 36.0 32.0 36.0 21 34.80380357533563 36.0 36.0 36.0 32.0 36.0 22 34.8026922840813 36.0 36.0 36.0 32.0 36.0 23 34.73918025742291 36.0 36.0 36.0 32.0 36.0 24 34.71255019305931 36.0 36.0 36.0 32.0 36.0 25 34.68150644501706 36.0 36.0 36.0 32.0 36.0 26 34.6046573492398 36.0 36.0 36.0 32.0 36.0 27 34.6097951037074 36.0 36.0 36.0 32.0 36.0 28 34.57928968655605 36.0 36.0 36.0 32.0 36.0 29 34.546704926986905 36.0 36.0 36.0 32.0 36.0 30 34.519349217767434 36.0 36.0 36.0 32.0 36.0 31 34.51120499545882 36.0 36.0 36.0 32.0 36.0 32 34.444703815695654 36.0 36.0 36.0 32.0 36.0 33 34.389597306456665 36.0 36.0 36.0 32.0 36.0 34 34.359463369101384 36.0 36.0 36.0 32.0 36.0 35 34.296220507888435 36.0 36.0 36.0 32.0 36.0 36 34.26997451585636 36.0 36.0 36.0 32.0 36.0 37 34.23824447463155 36.0 36.0 36.0 32.0 36.0 38 34.17532429713976 36.0 36.0 36.0 32.0 36.0 39 34.176890493737574 36.0 36.0 36.0 32.0 36.0 40 34.12681155428091 36.0 36.0 36.0 32.0 36.0 41 34.09550021486014 36.0 36.0 36.0 32.0 36.0 42 33.988543940865455 36.0 36.0 36.0 32.0 36.0 43 33.971422814840935 36.0 36.0 36.0 32.0 36.0 44 33.88120831674004 36.0 36.0 36.0 32.0 36.0 45 33.82094673829721 36.0 36.0 36.0 32.0 36.0 46 33.78190043397025 36.0 36.0 36.0 32.0 36.0 47 33.71127205071014 36.0 36.0 36.0 27.0 36.0 48 33.64529188710162 36.0 36.0 36.0 27.0 36.0 49 33.601726436611536 36.0 36.0 36.0 27.0 36.0 50 32.90223470282403 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 5.0 20 4.0 21 25.0 22 49.0 23 214.0 24 563.0 25 1380.0 26 2899.0 27 5374.0 28 9302.0 29 14254.0 30 20041.0 31 28561.0 32 41725.0 33 67656.0 34 130838.0 35 312404.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.926888741615514 18.320947153172526 12.282231747765843 25.469932357446112 2 15.84056490469752 20.94262017683179 36.472147497296525 26.744667421174167 3 18.006022418002402 25.418507680707958 28.68282823830894 27.892641662980704 4 12.160611493521928 15.839992948180143 35.44216327166664 36.55723228663129 5 14.455443674375923 37.03810973450213 32.35258469660647 16.15386189451548 6 34.1621320421787 35.448931759476274 16.618369046288585 13.77056715205644 7 29.913095764658102 30.721851354563302 21.085256187263596 18.279796693515003 8 28.813137792245204 31.680458116440025 19.503633733513617 20.002770357801154 9 27.869345325700113 13.412551373932974 18.695625483044832 40.02247781732209 10 16.296102743143713 26.302981458948864 30.77776710903473 26.623148688872693 11 37.581320232898946 21.174033562255133 22.195288188044334 19.04935801680159 12 25.034117900761377 23.692540654213698 28.35256580780328 22.920775637221645 13 29.25585751501271 19.278130632225974 25.973602814440532 25.49240903832078 14 24.10691096262366 19.320315758820705 25.563871902029767 31.008901376525866 15 25.272995449157598 26.609126556235406 23.06872543355786 25.04915256104913 16 25.941450914219516 25.472220823049412 23.73917040245807 24.847157860273008 17 23.668457430146844 25.382458912917894 25.571504351508032 25.37757930542723 18 24.867817313216694 24.15649422709135 27.000055092516074 23.975633367175877 19 25.475841182692793 24.576890142547725 26.14340401954365 23.803864655215836 20 25.947869723104144 23.211966761793377 25.750480486956413 25.08968302814607 21 27.295265049260426 23.334597833769088 25.168858030181156 24.201279086789327 22 26.0464823428486 23.437615595904266 25.625575520034 24.89032654121314 23 23.910138252474866 23.4531794291399 26.764910977243357 25.87177134114188 24 24.751413914524477 24.625330359377486 26.063249555716812 24.560006170381225 25 24.617496316631197 23.778664164914183 26.42376371031721 25.180075808137413 26 24.536297336395563 24.778085434943105 26.567884055050868 24.117733173610468 27 25.144192928879516 24.343733274564745 25.5408808991594 24.971192897396342 28 24.05327506930135 24.383843694560888 26.861219420434495 24.701661815703268 29 24.130261287595804 24.472631623685416 26.799805439202114 24.597301649516666 30 24.30888524394045 24.586716366693008 26.5699426078032 24.534455781563345 31 24.735891797100674 24.589020717795012 25.270641053693737 25.404446431410577 32 24.520250157804682 24.436192601990623 25.44944819520242 25.594109045002273 33 24.084513028462226 24.086874255229723 26.13421527776685 25.6943974385412 34 25.019794514833688 24.265792717192657 26.288060169028626 24.426352598945027 35 25.931487830447963 24.129115940523302 25.68057247738771 24.258823751641025 36 24.574494210098795 25.320821605556294 25.336721007990633 24.767963176354282 37 25.610439491247956 25.02062082861101 25.102159677622467 24.266780002518573 38 24.49850531522186 24.734789870460652 25.784611122217832 24.982093692099657 39 24.90059470027295 24.835268968860877 25.280585822269934 24.983550508596235 40 25.228678332895203 25.132185599758216 25.573879905112857 24.06525616223372 41 24.107002310806642 25.697649525560546 25.874737909192223 24.320610254440588 42 25.96039875142259 25.569706729127017 24.99752078994716 23.47237372950323 43 24.8250394310594 24.71579729444691 25.085237200253115 25.373926074240575 44 24.54213895679303 25.46880091170818 24.926057507504435 25.063002623994358 45 24.784900029278152 25.58296578234055 24.602619922365673 25.029514266015624 46 24.440530215382292 25.58347460761952 24.789820066143125 25.186175110855057 47 24.88831520455869 25.091693295764006 25.30073826876761 24.71925323090969 48 25.79150263112743 25.99739641952591 23.847002655526154 24.36409829382051 49 24.534782321255985 26.36244006711853 24.357226732819765 24.74555087880572 50 24.91220558767557 25.987303456211407 23.970275039312693 25.13021591680033 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 55.0 1 40.0 2 25.0 3 91.0 4 157.0 5 194.0 6 231.0 7 239.0 8 247.0 9 344.5 10 442.0 11 687.0 12 932.0 13 1564.5 14 2197.0 15 2994.0 16 3791.0 17 4204.0 18 4617.0 19 4604.5 20 4592.0 21 4653.0 22 4714.0 23 4966.0 24 5218.0 25 4862.5 26 4507.0 27 4887.0 28 5267.0 29 5935.0 30 6603.0 31 7557.0 32 8511.0 33 9850.0 34 11189.0 35 12612.0 36 14035.0 37 17094.0 38 20153.0 39 22345.0 40 24537.0 41 27136.0 42 29735.0 43 30555.5 44 31376.0 45 36412.0 46 41448.0 47 44176.0 48 46904.0 49 47979.5 50 49055.0 51 46527.5 52 44000.0 53 44124.5 54 44249.0 55 45503.5 56 46758.0 57 46326.0 58 45894.0 59 41364.5 60 36835.0 61 32571.5 62 28308.0 63 24670.0 64 21032.0 65 17692.5 66 14353.0 67 12484.0 68 10615.0 69 9814.0 70 9013.0 71 6870.5 72 4728.0 73 4140.5 74 3553.0 75 2749.5 76 1946.0 77 1659.5 78 1373.0 79 1110.5 80 848.0 81 683.5 82 519.0 83 442.5 84 366.0 85 263.0 86 160.0 87 114.5 88 69.0 89 57.5 90 46.0 91 36.0 92 26.0 93 24.0 94 22.0 95 21.0 96 20.0 97 16.0 98 12.0 99 13.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007240707889380872 2 6.296267729896411E-4 3 6.296267729896411E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 6.296267729896411E-4 10 6.296267729896411E-4 11 0.0 12 0.0 13 3.148133864948206E-4 14 3.148133864948206E-4 15 0.004722200797422308 16 1.574066932474103E-4 17 0.0 18 3.148133864948206E-4 19 1.574066932474103E-4 20 6.296267729896411E-4 21 0.0 22 3.148133864948206E-4 23 0.0015740669324741025 24 6.296267729896411E-4 25 0.0014166602392266924 26 0.004722200797422308 27 0.00582404765015418 28 0.004407387410927488 29 0.003148133864948205 30 0.002990727171700795 31 0.007240707889380872 32 0.002833320478453385 33 0.005351827570411949 34 0.003148133864948205 35 0.003620353944690436 36 0.008342554742112743 37 0.0026759137852059747 38 0.007240707889380872 39 0.002990727171700795 40 0.0025185070919585646 41 0.0033055405581956156 42 0.002203693705463744 43 0.0017314736257215129 44 9.444401594844616E-4 45 0.0017314736257215129 46 0.0012592535459792823 47 0.004249980717680077 48 0.002833320478453385 49 4.722200797422308E-4 50 9.444401594844616E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 635297.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.442205630976446 #Duplication Level Percentage of deduplicated Percentage of total 1 73.68573640169228 34.95813858439012 2 14.200271590410441 13.4738440961593 3 5.011264123616757 7.132362690712836 4 2.2856822282731124 4.337512251232058 5 1.2401309704840033 2.9417274255522234 6 0.7480007630296003 2.129208360706655 7 0.5130421953706016 1.703789733109777 8 0.3395803052823089 1.2888350937146447 9 0.25328168480732766 1.0814617595870462 >10 1.4567849966950703 12.929429435757417 >50 0.13927652681849234 4.648230914975218 >100 0.11861827824974089 10.71709218532632 >500 0.007996737859532971 2.4885936291220987 >1k 3.3319741081387383E-4 0.16977383965426754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1074 0.16905478854771863 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 939 0.14780488495931823 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 847 0.1333234691805565 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 788 0.1240364742789593 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 788 0.1240364742789593 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 764 0.12025871364102145 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 764 0.12025871364102145 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 733 0.11537910615035173 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 712 0.1120735655921561 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 689 0.10845321164746567 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 683 0.10750877148798121 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 647 0.10184213053107444 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 641 0.10089769037158998 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.148133864948205E-4 2 0.0 0.0 0.0 0.0 3.148133864948205E-4 3 0.0 0.0 0.0 0.0 3.148133864948205E-4 4 0.0 0.0 0.0 0.0 4.722200797422308E-4 5 0.0 0.0 0.0 0.0 4.722200797422308E-4 6 0.0 0.0 0.0 0.0 6.29626772989641E-4 7 0.0 0.0 0.0 0.0 6.29626772989641E-4 8 0.0 0.0 0.0 0.0 7.870334662370514E-4 9 0.0 0.0 0.0 0.0 7.870334662370514E-4 10 0.0 0.0 0.0 0.0 7.870334662370514E-4 11 0.0 0.0 0.0 0.0 7.870334662370514E-4 12 0.0 0.0 0.0 0.0 7.870334662370514E-4 13 0.0 0.0 0.0 0.0 7.870334662370514E-4 14 0.0 0.0 0.0 0.0 0.001101846852731872 15 0.0 0.0 0.0 0.0 0.001259253545979282 16 0.0 0.0 0.0 0.0 0.0014166602392266924 17 0.0 0.0 0.0 0.0 0.0014166602392266924 18 0.0 0.0 0.0 0.0 0.0014166602392266924 19 0.0 0.0 0.0 0.0 0.0014166602392266924 20 0.0 0.0 0.0 0.0 0.0014166602392266924 21 0.0 0.0 0.0 1.5740669324741026E-4 0.0014166602392266924 22 0.0 0.0 0.0 6.29626772989641E-4 0.0014166602392266924 23 0.0 0.0 0.0 0.0017314736257215129 0.0020462870122163333 24 0.0 0.0 0.0 0.004092574024432667 0.0020462870122163333 25 0.0 0.0 0.0 0.0045647941041748975 0.0020462870122163333 26 0.0 0.0 0.0 0.005194420877164539 0.0020462870122163333 27 0.0 0.0 0.0 0.006768487809638642 0.0020462870122163333 28 0.0 0.0 0.0 0.008342554742112745 0.0020462870122163333 29 0.0 0.0 0.0 0.014953635858503976 0.0020462870122163333 30 0.0 0.0 0.0 0.02833320478453385 0.0020462870122163333 31 0.0 0.0 0.0 0.04674978789448085 0.0020462870122163333 32 0.0 0.0 0.0 0.06705525132339678 0.002203693705463744 33 0.0 0.0 0.0 0.0843699875806119 0.002203693705463744 34 0.0 0.0 0.0 0.10640692463524934 0.002203693705463744 35 0.0 0.0 0.0 0.1304901487021031 0.002203693705463744 36 0.0 0.0 0.0 0.16212889404483258 0.002203693705463744 37 0.0 0.0 0.0 0.208721275246066 0.002361100398711154 38 0.0 0.0 0.0 0.27404505294374126 0.002361100398711154 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACGTA 30 0.005744142 29.332127 17 GAATTCG 30 0.005744142 29.332127 43 AATTCGT 50 0.0025785398 22.000826 22 TTCGCGC 50 0.0025797188 21.999096 17 TAACCTA 70 3.2132775E-5 21.999094 5 GTAGAGT 70 3.2132775E-5 21.999094 4 GTGTAGG 80 3.6148303E-6 21.997364 1 GTTCGCG 50 0.0025808983 21.997362 16 GTCTAGA 160 1.8189894E-12 20.622528 1 TAGTTCG 75 5.4658136E-5 20.534105 9 AACGGAC 65 4.929988E-4 20.306858 15 CGATTAA 55 0.0044762553 20.0039 33 ACGATTA 55 0.0044762553 20.0039 32 GTCGTAA 55 0.0044823783 19.999178 38 TATACAG 55 0.0044823783 19.999178 5 TAGTACT 55 0.0044823783 19.999178 4 TATAACC 55 0.0044844206 19.997602 3 TTACTTG 135 2.586603E-9 19.557829 28 GTACACT 90 1.0010888E-5 19.55475 6 CTAGAAG 200 0.0 18.697758 3 >>END_MODULE