##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064236_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1334899 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18403564614252 32.0 32.0 32.0 32.0 32.0 2 30.791914594287658 32.0 32.0 32.0 32.0 32.0 3 30.80804015884348 32.0 32.0 32.0 32.0 32.0 4 30.833981447285524 32.0 32.0 32.0 32.0 32.0 5 30.74803786653522 32.0 32.0 32.0 32.0 32.0 6 34.37118463644066 36.0 36.0 36.0 32.0 36.0 7 34.316125789291924 36.0 36.0 36.0 32.0 36.0 8 34.2730753412805 36.0 36.0 36.0 32.0 36.0 9 34.40647494679373 36.0 36.0 36.0 32.0 36.0 10 34.11268642796197 36.0 36.0 36.0 32.0 36.0 11 34.385177455373025 36.0 36.0 36.0 32.0 36.0 12 34.2111762762576 36.0 36.0 36.0 32.0 36.0 13 34.28118381989948 36.0 36.0 36.0 32.0 36.0 14 34.18425663664442 36.0 36.0 36.0 32.0 36.0 15 34.120493011081734 36.0 36.0 36.0 32.0 36.0 16 34.12944125360795 36.0 36.0 36.0 32.0 36.0 17 34.05172301425052 36.0 36.0 36.0 32.0 36.0 18 34.04579297759606 36.0 36.0 36.0 32.0 36.0 19 34.06465432965341 36.0 36.0 36.0 32.0 36.0 20 34.04741182666254 36.0 36.0 36.0 32.0 36.0 21 34.01956852166344 36.0 36.0 36.0 32.0 36.0 22 34.00405199194846 36.0 36.0 36.0 32.0 36.0 23 33.95166525707188 36.0 36.0 36.0 32.0 36.0 24 33.94186901031464 36.0 36.0 36.0 32.0 36.0 25 33.525743895231024 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 6.0 4 16.0 5 18.0 6 54.0 7 28.0 8 81.0 9 76.0 10 123.0 11 45.0 12 79.0 13 56.0 14 116.0 15 225.0 16 340.0 17 464.0 18 604.0 19 793.0 20 1301.0 21 1843.0 22 2940.0 23 4903.0 24 7248.0 25 10907.0 26 15845.0 27 20754.0 28 28742.0 29 38761.0 30 51111.0 31 68998.0 32 96427.0 33 134508.0 34 277692.0 35 569794.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.586029007315524 17.089271609730655 11.081876647717138 26.242822735236683 2 16.69768222389037 19.545344894494665 37.423191545788406 26.33378133582657 3 19.080855692530818 23.27039596305863 28.677655984993315 28.971092359417234 4 12.385276770376741 15.089415009855092 36.470056778212864 36.0552514415553 5 14.362292314873015 36.697176223972164 33.94292512659456 14.99760633456026 6 34.0040413303574 35.95173180071461 16.783508614986488 13.260718253941494 7 30.198234947676344 30.560222032732444 20.70137526618901 18.540167753402198 8 27.98247914808792 33.046215181241145 19.535075426593025 19.43623024407791 9 27.295634440306422 14.05685188335823 18.620127278546047 40.0273863977893 10 15.375096129485854 26.742061166086266 32.043386816056504 25.839455888371365 11 37.160926975113725 21.100233924878708 22.627453831503633 19.111385268503938 12 24.13984374355834 23.854105685602683 29.273909012067413 22.732141558771566 13 29.071287541358647 19.49534579352384 25.560356265301014 25.873010399816497 14 23.14021275271975 19.74562924416639 25.46541062954026 31.6487473735736 15 25.060938497839796 27.369405725970143 22.410601049971067 25.159054726218994 16 25.465519580644457 25.922325075503338 23.938287031866192 24.67386831198601 17 23.75601444891944 25.94456550174315 25.465058665941072 24.834361383396335 18 24.424589147542534 25.23081282850766 26.395991222552674 23.948606801397133 19 25.334972618195312 25.032929384555985 25.59773298898356 24.034365008265144 20 25.422651258544864 24.604713301875332 25.258988695812544 24.713646743767253 21 26.371013206347683 24.212836905804316 24.740536050570356 24.675613837277645 22 25.34459983236697 24.61559107136699 25.284698762844243 24.755110333421797 23 24.150503452567495 24.418386702554375 25.802862519587038 25.62824732529109 24 24.387034864324885 25.19864905895186 25.56869595204984 24.845620124673417 25 24.46917297291624 24.718224224095145 25.634360975873065 25.17824182711555 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 84.0 1 84.0 2 266.0 3 448.0 4 448.0 5 448.0 6 1291.5 7 2135.0 8 2135.0 9 2135.0 10 2342.5 11 2550.0 12 2550.0 13 2550.0 14 3175.0 15 3800.0 16 3800.0 17 3800.0 18 6345.5 19 8891.0 20 8891.0 21 8891.0 22 14507.0 23 20123.0 24 20123.0 25 20123.0 26 29627.0 27 39131.0 28 39131.0 29 39131.0 30 49084.5 31 59038.0 32 59038.0 33 59038.0 34 72221.5 35 85405.0 36 85405.0 37 85405.0 38 98021.0 39 110637.0 40 110637.0 41 110637.0 42 126865.0 43 143093.0 44 143093.0 45 143093.0 46 158650.5 47 174208.0 48 174208.0 49 174208.0 50 178346.5 51 182485.0 52 182485.0 53 182485.0 54 168687.5 55 154890.0 56 154890.0 57 154890.0 58 141602.0 59 128314.0 60 128314.0 61 128314.0 62 112271.0 63 96228.0 64 96228.0 65 96228.0 66 78794.5 67 61361.0 68 61361.0 69 61361.0 70 45737.5 71 30114.0 72 30114.0 73 30114.0 74 22904.0 75 15694.0 76 15694.0 77 15694.0 78 12437.0 79 9180.0 80 9180.0 81 9180.0 82 6322.0 83 3464.0 84 3464.0 85 3464.0 86 2640.0 87 1816.0 88 1816.0 89 1816.0 90 1308.5 91 801.0 92 801.0 93 801.0 94 546.5 95 292.0 96 292.0 97 292.0 98 504.5 99 717.0 100 717.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.035733040477219626 2 0.006367522936192176 3 0.002022624932672809 4 0.004195073934432493 5 0.009438916352473108 6 0.0142332865632531 7 0.024046763088443397 8 0.036631984891740875 9 0.04944194279866866 10 0.05700805828755584 11 0.053187544525840534 12 0.06067874798018427 13 0.06270137291285709 14 0.064574173776443 15 0.05745753049481646 16 0.06382505343100864 17 0.06142786832561865 18 0.07685974744156675 19 0.07371344199074237 20 0.0791820205124133 21 0.07453747437072018 22 0.0773841316833708 23 0.08307744630867205 24 0.0759608030270455 25 0.07768377982154455 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1334899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.98186152229169 #Duplication Level Percentage of deduplicated Percentage of total 1 79.21883003370677 41.97161082803814 2 12.282943373687097 13.0154640982168 3 3.4380414209214067 5.464615034134827 4 1.5002694205934557 3.1794826675204493 5 0.7802654430922075 2.066995782827045 6 0.5033982470892879 1.6002585730709415 7 0.36596244713763915 1.3572560187623772 8 0.2576173787615338 1.091923862982348 9 0.20084075814945299 0.9576825512675753 >10 1.2582819629717383 12.385249463368778 >50 0.10017734881761411 3.695254681670134 >100 0.08356597332360433 8.955701164871767 >500 0.007674410933297258 2.755197794295568 >1k 0.0021317808148047937 1.5033074789732725 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2700 0.2022624932672809 No Hit TATCAACGCAGAGTACTTTTTTTTT 1886 0.14128409714892287 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1486 0.11131928333154793 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.491203454343737E-5 2 0.0 0.0 0.0 7.491203454343737E-5 7.491203454343737E-5 3 0.0 0.0 0.0 7.491203454343737E-5 7.491203454343737E-5 4 0.0 0.0 0.0 7.491203454343737E-5 7.491203454343737E-5 5 0.0 0.0 0.0 7.491203454343737E-5 1.4982406908687474E-4 6 0.0 0.0 0.0 7.491203454343737E-5 1.4982406908687474E-4 7 0.0 0.0 0.0 7.491203454343737E-5 1.4982406908687474E-4 8 0.0 0.0 0.0 7.491203454343737E-5 1.4982406908687474E-4 9 0.0 0.0 0.0 7.491203454343737E-5 1.4982406908687474E-4 10 0.0 0.0 0.0 2.247361036303121E-4 1.4982406908687474E-4 11 0.0 0.0 0.0 2.247361036303121E-4 1.4982406908687474E-4 12 0.0 0.0 0.0 2.247361036303121E-4 2.247361036303121E-4 13 7.491203454343737E-5 0.0 0.0 2.247361036303121E-4 5.99296276347499E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCTTA 50 8.691509E-5 15.20429 17 CTCGACG 40 0.005275265 14.25135 13 CTTAAAC 90 3.6541678E-8 13.717348 3 CGCTTAC 50 0.0014965896 13.303255 18 ACTCCGT 50 0.0015008254 13.298267 6 TCGCTTA 65 5.4484277E-5 13.154599 9 GCGTAAC 120 7.385097E-10 12.667868 11 ATTCCGA 105 1.995977E-8 12.665017 6 TTACAAT 160 0.0 12.471334 16 CGTCAAT 185 0.0 12.327341 19 CTAGCAC 85 3.9578154E-6 12.289751 3 GTTACAA 155 1.8189894E-12 12.260606 15 ACGGTAT 235 0.0 12.128353 9 CGCGTAA 110 3.810601E-8 12.091148 10 AGAGGTA 55 0.003072772 12.0884285 5 CCGATAA 95 1.0386739E-6 12.000688 9 CGCGGTC 95 1.039145E-6 12.000237 10 ACGAACG 80 2.859572E-5 11.877461 15 CCGTCAA 195 0.0 11.695169 18 CGTCTTA 130 2.6047928E-9 11.694731 15 >>END_MODULE