##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064236_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1334899 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297287659965285 32.0 32.0 32.0 32.0 32.0 2 31.32811920602233 32.0 32.0 32.0 32.0 32.0 3 31.424662839660527 32.0 32.0 32.0 32.0 32.0 4 31.509974162839285 32.0 32.0 32.0 32.0 32.0 5 31.461316549042287 32.0 32.0 32.0 32.0 32.0 6 35.024865551626 36.0 36.0 36.0 36.0 36.0 7 35.04172825060173 36.0 36.0 36.0 36.0 36.0 8 34.97635251805567 36.0 36.0 36.0 36.0 36.0 9 35.105253655894565 36.0 36.0 36.0 36.0 36.0 10 34.93702519816106 36.0 36.0 36.0 32.0 36.0 11 35.09986448412951 36.0 36.0 36.0 36.0 36.0 12 34.99887032651908 36.0 36.0 36.0 36.0 36.0 13 35.04482436498941 36.0 36.0 36.0 36.0 36.0 14 34.983980061412886 36.0 36.0 36.0 36.0 36.0 15 34.95320994322417 36.0 36.0 36.0 36.0 36.0 16 34.972293034903764 36.0 36.0 36.0 36.0 36.0 17 34.936995982467586 36.0 36.0 36.0 36.0 36.0 18 34.93420176357912 36.0 36.0 36.0 36.0 36.0 19 34.93740799865758 36.0 36.0 36.0 36.0 36.0 20 34.91995649109034 36.0 36.0 36.0 32.0 36.0 21 34.91652327254721 36.0 36.0 36.0 32.0 36.0 22 34.897497114013866 36.0 36.0 36.0 32.0 36.0 23 34.85159551396772 36.0 36.0 36.0 32.0 36.0 24 34.82482794578466 36.0 36.0 36.0 32.0 36.0 25 34.790659817709056 36.0 36.0 36.0 32.0 36.0 26 34.733149848790056 36.0 36.0 36.0 32.0 36.0 27 34.731038827656626 36.0 36.0 36.0 32.0 36.0 28 34.70660851495132 36.0 36.0 36.0 32.0 36.0 29 34.67730742176 36.0 36.0 36.0 32.0 36.0 30 34.665513271041476 36.0 36.0 36.0 32.0 36.0 31 34.648538953134285 36.0 36.0 36.0 32.0 36.0 32 34.61840783460022 36.0 36.0 36.0 32.0 36.0 33 34.601146603600725 36.0 36.0 36.0 32.0 36.0 34 34.58855538883466 36.0 36.0 36.0 32.0 36.0 35 34.550357742420964 36.0 36.0 36.0 32.0 36.0 36 34.52321037022276 36.0 36.0 36.0 32.0 36.0 37 34.51729231949383 36.0 36.0 36.0 32.0 36.0 38 34.47087757201107 36.0 36.0 36.0 32.0 36.0 39 34.475819518929896 36.0 36.0 36.0 32.0 36.0 40 34.45736643746081 36.0 36.0 36.0 32.0 36.0 41 34.443477746256455 36.0 36.0 36.0 32.0 36.0 42 34.380872260747815 36.0 36.0 36.0 32.0 36.0 43 34.37267238944669 36.0 36.0 36.0 32.0 36.0 44 34.30861136310687 36.0 36.0 36.0 32.0 36.0 45 34.283042387476506 36.0 36.0 36.0 32.0 36.0 46 34.257941612062034 36.0 36.0 36.0 32.0 36.0 47 34.23521180254087 36.0 36.0 36.0 32.0 36.0 48 34.20109836025048 36.0 36.0 36.0 32.0 36.0 49 34.175520395175965 36.0 36.0 36.0 32.0 36.0 50 33.56667508178521 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 1.0 20 14.0 21 42.0 22 120.0 23 401.0 24 1013.0 25 2400.0 26 4985.0 27 9231.0 28 15612.0 29 24601.0 30 35789.0 31 51324.0 32 74447.0 33 120507.0 34 245770.0 35 748640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.4861304856615 18.168367048796895 11.731962439260473 26.61354002628113 2 16.041423513777122 20.42199605361924 36.82659447117149 26.709985961432142 3 18.140602818948306 24.04293970686833 29.0222826514445 28.794174822738867 4 12.037240270612234 15.90659667884986 36.52800698779458 35.52815606274332 5 14.077169883264576 37.048570715836924 33.62261864006191 15.251640760836588 6 34.10814908704635 36.40652694063517 16.381925810061894 13.10339816225659 7 30.105573530282065 30.77229063771866 20.650251442243945 18.47188438975533 8 28.050886246824664 33.34244763086945 19.221229471293334 19.38543665101255 9 27.458578890947322 13.830084494043316 18.44231009815812 40.26902651685124 10 15.41609608025866 27.003469964431364 31.993641395057548 25.586792560252427 11 37.54858989120509 21.064771289470276 22.462706860529313 18.923931958795322 12 24.194882305614364 23.922576856059415 29.040720714241836 22.841820124084386 13 29.266293803103466 19.470160177512223 25.554014026581882 25.709531992802425 14 23.234227060215133 19.782874633773243 25.24374539758498 31.739152908426643 15 25.11645573034112 27.45770660497647 22.2534951702149 25.172342494467507 16 25.5882333111342 26.135470642833436 23.73451835248976 24.5417776935426 17 23.908850032848928 26.09957757103721 25.243707576378437 24.747864819735426 18 24.599406394814867 25.27354231871594 26.27159909326134 23.85545219320785 19 25.582010324376604 24.991928228277946 25.449865495441976 23.976195951903478 20 25.567891958381683 24.579722869173786 25.141116179349204 24.711268993095324 21 26.55871343075394 24.277716890940813 24.588302186157904 24.575267492147347 22 25.467507980016435 24.69396515236756 25.172129385263432 24.66639748235257 23 24.17946115208426 24.448248350981544 25.59126816167685 25.78102233525734 24 24.596053766107097 25.256181581594927 25.315587091999138 24.83217756029884 25 24.707106529394977 24.759546053513784 25.47047617335308 25.06287124373816 26 24.500589964976683 25.329312831270016 25.75685951341936 24.41323769033394 27 25.14353909267711 25.06989664585999 25.034011872690716 24.752552388772187 28 24.33733928857711 25.07240535612348 25.77600711992245 24.814248235376965 29 24.442698122437484 25.011817639034245 25.574869144462863 24.97061509406541 30 24.411640215603942 25.405006536290458 25.826625363803558 24.35672788430204 31 24.973273289696564 24.866516282878347 25.040399098895943 25.119811328529146 32 24.669179781610712 25.14256133958216 24.8794633760443 25.308795502762827 33 24.37607034818998 24.74510168214161 25.47792029942031 25.400907670248102 34 24.962767965767505 24.91444872617 25.689279571374634 24.43350373668786 35 25.626897660965476 24.674742877005723 25.471900945936937 24.226458516091864 36 24.485320779255808 25.358926950012435 25.220180819471206 24.93557145126055 37 25.366725224837154 25.071636994280276 25.0024909072521 24.559146873630468 38 24.59898576793729 24.89423532910849 25.46061104147953 25.04616786147469 39 25.296682830864754 24.897684596615484 24.774449129972588 25.031183442547178 40 25.347786675856078 25.121697243926377 25.286657127660373 24.24385895255718 41 24.471648316413944 25.330690357558368 25.764593863471724 24.43306746255597 42 25.624156760040783 25.52647014977365 25.068751446758174 23.78062164342739 43 24.877105242261113 24.693044029359896 25.41408154428631 25.01576918409268 44 24.44498881175354 25.269780197964913 25.062795765621402 25.22243522466014 45 24.765579057371983 25.423238705955942 25.11497245081037 24.696209785861704 46 24.75245077107708 25.02123776861844 25.068582635520936 25.157728824783536 47 24.816180188737906 24.988631826241868 25.476171034267836 24.719016950752398 48 25.511417225210863 25.477556224618297 24.5636837772096 24.447342772961242 49 24.72765709439972 25.553562893943955 24.85013836263145 24.86864164902487 50 24.65594259854264 25.679256322108596 24.784343749508384 24.880457329840382 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 16.5 2 17.0 3 74.5 4 132.0 5 162.5 6 193.0 7 186.5 8 180.0 9 246.0 10 312.0 11 475.5 12 639.0 13 1110.0 14 1581.0 15 2156.0 16 2731.0 17 2918.5 18 3106.0 19 3240.0 20 3374.0 21 4083.5 22 4793.0 23 5569.0 24 6345.0 25 7795.0 26 9245.0 27 11516.5 28 13788.0 29 15998.0 30 18208.0 31 20341.0 32 22474.0 33 25896.5 34 29319.0 35 33565.5 36 37812.0 37 44285.5 38 50759.0 39 55112.5 40 59466.0 41 64742.0 42 70018.0 43 71871.0 44 73724.0 45 81179.0 46 88634.0 47 93806.5 48 98979.0 49 102275.0 50 105571.0 51 103230.0 52 100889.0 53 98031.5 54 95174.0 55 94767.5 56 94361.0 57 91849.0 58 89337.0 59 81043.5 60 72750.0 61 63941.0 62 55132.0 63 47778.0 64 40424.0 65 34242.5 66 28061.0 67 23701.0 68 19341.0 69 17569.0 70 15797.0 71 11963.0 72 8129.0 73 6906.0 74 5683.0 75 4349.0 76 3015.0 77 2574.5 78 2134.0 79 1766.5 80 1399.0 81 1126.0 82 853.0 83 677.0 84 501.0 85 373.5 86 246.0 87 176.5 88 107.0 89 81.0 90 55.0 91 44.5 92 34.0 93 28.5 94 23.0 95 21.5 96 20.0 97 13.0 98 6.0 99 9.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007566115488887174 2 3.745601727171868E-4 3 2.996481381737495E-4 4 0.0 5 0.0 6 7.491203454343737E-5 7 0.0 8 0.0 9 8.989444145212483E-4 10 0.0011236805181515607 11 1.4982406908687474E-4 12 7.491203454343737E-5 13 3.745601727171868E-4 14 1.4982406908687474E-4 15 0.00426998596897593 16 8.989444145212483E-4 17 0.0 18 3.745601727171868E-4 19 0.0 20 4.4947220726062416E-4 21 0.0 22 1.4982406908687474E-4 23 0.0010487684836081232 24 4.4947220726062416E-4 25 0.0020975369672162464 26 0.005543490556214365 27 0.005318754452584053 28 0.0039703378308021805 29 0.0022473610363031213 30 0.003296129519911244 31 0.0068919071779962385 32 0.002621921209020308 33 0.0039703378308021805 34 0.002022624932672809 35 0.002397185105389996 36 0.006517347005279051 37 0.003296129519911244 38 0.0071915553161699865 39 0.004195073934432493 40 0.0021724490017596835 41 0.0029964813817374945 42 0.0013484166217818726 43 0.0012735045872384354 44 0.001198592552694998 45 0.0010487684836081232 46 9.738564490646859E-4 47 0.002397185105389996 48 0.0022473610363031213 49 7.491203454343737E-5 50 0.0014982406908687473 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1334899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.076631678445786 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9309702282675 44.82259577191371 2 12.00591225456666 13.465022389261467 3 3.3687764193110925 5.667289034182247 4 1.404567456528251 3.150536477090646 5 0.7484228863487202 2.0984517268748233 6 0.48064585573263463 1.6171800371814204 7 0.33295340532143286 1.3069633833405983 8 0.25374166997357434 1.1383182534865501 9 0.19235379843672037 0.9707897796197372 >10 1.1217057308272984 11.600325302616472 >50 0.0840076347759535 3.268044479651 >100 0.06841562055477729 7.6784513350173045 >500 0.006182925184799044 2.3358968930912356 >1k 0.001344114170608488 0.8801351366727874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1338 0.1002323022191192 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.491203454343737E-5 2 0.0 0.0 0.0 0.0 7.491203454343737E-5 3 0.0 0.0 0.0 0.0 7.491203454343737E-5 4 0.0 0.0 0.0 0.0 7.491203454343737E-5 5 0.0 0.0 0.0 0.0 1.4982406908687474E-4 6 0.0 0.0 0.0 0.0 2.247361036303121E-4 7 0.0 0.0 0.0 0.0 2.247361036303121E-4 8 0.0 0.0 0.0 0.0 2.247361036303121E-4 9 0.0 0.0 0.0 0.0 2.247361036303121E-4 10 0.0 0.0 0.0 7.491203454343737E-5 2.247361036303121E-4 11 0.0 0.0 0.0 7.491203454343737E-5 2.996481381737495E-4 12 0.0 0.0 0.0 7.491203454343737E-5 3.745601727171868E-4 13 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 14 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 15 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 16 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 17 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 18 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 19 0.0 0.0 0.0 7.491203454343737E-5 4.494722072606242E-4 20 0.0 0.0 0.0 1.4982406908687474E-4 4.494722072606242E-4 21 0.0 0.0 0.0 1.4982406908687474E-4 5.99296276347499E-4 22 0.0 0.0 0.0 2.247361036303121E-4 5.99296276347499E-4 23 0.0 0.0 0.0 5.243842418040616E-4 5.99296276347499E-4 24 0.0 0.0 0.0 7.491203454343736E-4 5.99296276347499E-4 25 0.0 0.0 0.0 9.738564490646858E-4 5.99296276347499E-4 26 0.0 0.0 0.0 0.0012735045872384354 7.491203454343736E-4 27 0.0 0.0 0.0 0.0016480647599556222 8.240323799778111E-4 28 0.0 0.0 0.0 0.003221217485367807 8.240323799778111E-4 29 0.0 0.0 0.0 0.007865763627060924 8.240323799778111E-4 30 0.0 0.0 0.0 0.01513223097777435 9.738564490646858E-4 31 0.0 0.0 0.0 0.02996481381737495 0.0011236805181515605 32 0.0 0.0 0.0 0.046520373451474605 0.0011236805181515605 33 0.0 0.0 0.0 0.05985471560020646 0.0011236805181515605 34 0.0 0.0 0.0 0.07828307609789205 0.001198592552694998 35 0.0 0.0 0.0 0.09633687642286046 0.001198592552694998 36 0.0 0.0 0.0 0.12585221803297478 0.001198592552694998 37 0.0 0.0 0.0 0.17064961468995032 0.001198592552694998 38 0.0 0.0 0.0 0.23702167729543583 0.001198592552694998 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 275 0.0 23.997099 4 ACGTATG 60 2.8709762E-4 22.002285 32 GGTATAC 65 4.934063E-4 20.306759 1 GATATAC 275 0.0 19.99908 1 TGTAGGA 425 0.0 19.667475 2 CGTCGTA 305 0.0 19.474514 10 GTATCAA 2210 0.0 19.311329 1 AGGACGT 365 0.0 18.682674 5 CCTTATA 225 0.0 18.574837 2 ACCGTCG 320 0.0 18.560255 8 TACCGTC 335 0.0 18.385836 7 GATTTCG 120 3.1603668E-7 18.33455 41 CCGTCGT 325 0.0 18.276768 9 ATTTCGT 125 4.851936E-7 17.60051 42 TATGGCG 290 0.0 17.445513 16 ATATGGC 555 0.0 17.440641 15 GTCCTAC 395 0.0 17.265028 1 ATACCGT 370 0.0 17.24116 6 GGCGTTA 345 0.0 17.21789 42 CGCAATA 410 0.0 17.173801 36 >>END_MODULE