##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064234_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1121217 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300922123014544 32.0 32.0 32.0 32.0 32.0 2 31.374833774371954 32.0 32.0 32.0 32.0 32.0 3 31.445484683161244 32.0 32.0 32.0 32.0 32.0 4 31.533615705077608 32.0 32.0 32.0 32.0 32.0 5 31.483605760526284 32.0 32.0 32.0 32.0 32.0 6 35.041457630414094 36.0 36.0 36.0 36.0 36.0 7 35.066297603407726 36.0 36.0 36.0 36.0 36.0 8 35.02117609704455 36.0 36.0 36.0 36.0 36.0 9 35.11576082060832 36.0 36.0 36.0 36.0 36.0 10 34.97666553396889 36.0 36.0 36.0 36.0 36.0 11 35.11744559706105 36.0 36.0 36.0 36.0 36.0 12 35.021115448659806 36.0 36.0 36.0 36.0 36.0 13 35.0676443543043 36.0 36.0 36.0 36.0 36.0 14 35.0059248120569 36.0 36.0 36.0 36.0 36.0 15 34.98288912850947 36.0 36.0 36.0 36.0 36.0 16 34.99410105269542 36.0 36.0 36.0 36.0 36.0 17 34.954401333550955 36.0 36.0 36.0 36.0 36.0 18 34.952315207493285 36.0 36.0 36.0 36.0 36.0 19 34.949593165283794 36.0 36.0 36.0 36.0 36.0 20 34.939206237507996 36.0 36.0 36.0 36.0 36.0 21 34.94077596040731 36.0 36.0 36.0 36.0 36.0 22 34.92360354864402 36.0 36.0 36.0 32.0 36.0 23 34.870818048602544 36.0 36.0 36.0 32.0 36.0 24 34.837002114666475 36.0 36.0 36.0 32.0 36.0 25 34.81396643111904 36.0 36.0 36.0 32.0 36.0 26 34.75526057846073 36.0 36.0 36.0 32.0 36.0 27 34.74831901407132 36.0 36.0 36.0 32.0 36.0 28 34.72929504279725 36.0 36.0 36.0 32.0 36.0 29 34.6946032748344 36.0 36.0 36.0 32.0 36.0 30 34.675724681306114 36.0 36.0 36.0 32.0 36.0 31 34.66708674591983 36.0 36.0 36.0 32.0 36.0 32 34.621107243290105 36.0 36.0 36.0 32.0 36.0 33 34.596883564912055 36.0 36.0 36.0 32.0 36.0 34 34.58824027819771 36.0 36.0 36.0 32.0 36.0 35 34.54956177082581 36.0 36.0 36.0 32.0 36.0 36 34.516699265173465 36.0 36.0 36.0 32.0 36.0 37 34.50860627336189 36.0 36.0 36.0 32.0 36.0 38 34.471294138422806 36.0 36.0 36.0 32.0 36.0 39 34.46512673282692 36.0 36.0 36.0 32.0 36.0 40 34.438944468376775 36.0 36.0 36.0 32.0 36.0 41 34.41542716530341 36.0 36.0 36.0 32.0 36.0 42 34.35954057064779 36.0 36.0 36.0 32.0 36.0 43 34.34989658558513 36.0 36.0 36.0 32.0 36.0 44 34.27886305683913 36.0 36.0 36.0 32.0 36.0 45 34.24159284063656 36.0 36.0 36.0 32.0 36.0 46 34.20782596054109 36.0 36.0 36.0 32.0 36.0 47 34.190610738153275 36.0 36.0 36.0 32.0 36.0 48 34.13098356517962 36.0 36.0 36.0 32.0 36.0 49 34.10976644128657 36.0 36.0 36.0 32.0 36.0 50 33.507099874511354 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 8.0 21 30.0 22 110.0 23 361.0 24 988.0 25 2236.0 26 4467.0 27 8235.0 28 13783.0 29 21294.0 30 30424.0 31 42663.0 32 61246.0 33 96778.0 34 198029.0 35 640562.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.021479164381034 18.43768758925123 12.201942142457675 26.33889110391006 2 15.82928489056049 20.940534938499642 36.902087292958605 26.328092877981256 3 17.99374248581 24.767037812652738 29.07335989982269 28.16585980171457 4 12.24383861464819 16.261348160079628 36.24320715793642 35.251606067335764 5 14.158008663800139 37.112976346238064 33.38533040437311 15.343684585588695 6 33.75912180903914 36.231263612477186 16.657836951732673 13.351777626751005 7 29.557132218174036 30.957309704204818 21.11566470302306 18.369893374598092 8 27.90824612898306 32.97131598967907 19.56775539436166 19.552682486976206 9 27.62048654838905 13.937517169043279 18.66671899136999 39.775277291197675 10 15.888769870327247 26.80352512961478 31.621190377869564 25.68651462218841 11 37.28193318682573 21.137675523717107 22.688670158114046 18.891721131343115 12 24.700793335800896 23.84279553876821 28.880277199288273 22.57613392614262 13 29.28678965262591 19.598345361983284 25.525146002718486 25.58971898267232 14 23.660629476720384 19.84441905536573 25.25782252677225 31.237128941141634 15 25.14317568622204 27.37181974268067 22.4741900238589 25.010814547238386 16 25.581449277430483 25.786139401555648 24.03998547993368 24.592425841080193 17 23.894036569192227 25.75353388327148 25.429867724089096 24.9225618234472 18 24.591915548682053 24.87946101279506 26.59724191813516 23.931381520387724 19 25.54902396235519 24.706724924791544 25.691280100105512 24.052971012747758 20 25.945920876482443 24.164718620703187 25.045642694626963 24.843717808187414 21 27.128825196193063 24.03415217571621 24.54556076120858 24.29146186688215 22 25.99492514816516 24.23968641161597 25.27213781478129 24.493250625437582 23 24.430322733130872 24.153031782769432 25.776552905133315 25.640092578966378 24 24.786615222428544 24.931814979120844 25.56309500238135 24.718474796069263 25 24.827997709609118 24.267351405540104 25.840300533532645 25.064350351318133 26 24.412326886730607 25.313001991688957 26.054020883746194 24.220650237834242 27 25.12556225399297 24.776547798390414 25.255517291512252 24.842372656104363 28 24.435992985923683 24.77795596401629 25.99079179502914 24.79525925503089 29 24.572843390923772 24.563121603506268 25.772726015949083 25.091308989620874 30 24.416572940757796 25.11922738336587 25.94773171408261 24.516467961793722 31 25.031686525934788 24.784437968886998 25.061923633019635 25.121951872158583 32 24.764423355646034 25.070884822754497 24.873861137992392 25.290830683607073 33 24.451445049069147 24.49782504573335 25.518987703057423 25.53174220214008 34 25.169754944589386 24.700604276763215 25.634624389591277 24.495016389056122 35 25.69390682026565 24.43229859755902 25.568593313521013 24.30520126865432 36 24.35657870678006 25.304886478676007 25.280893364432217 25.057641450111717 37 25.504891716859273 25.07766364217731 24.978036552528092 24.439408088435318 38 24.685743133979166 24.814005781630613 25.425081858862924 25.0751692255273 39 25.429036501884184 24.738867705755123 24.74190023858898 25.09019555377171 40 25.545422517938448 24.971213749615366 25.312635179429094 24.170728553017092 41 24.43831398760946 25.33317635558315 25.803574454725297 24.424935202082096 42 25.88619020267498 25.53085789918694 24.94505906150888 23.637892836629195 43 24.985618100590347 24.55741655599665 25.49114743921919 24.965817904193806 44 24.59260422027333 25.184644762296347 24.87372982865787 25.349021188772458 45 24.75115858422613 25.49839635532057 24.954869621368612 24.79557543908469 46 24.704359839494973 25.07440615548724 24.875514064703257 25.345719940314538 47 24.86625817212069 24.98898491781054 25.354578617361913 24.790178292706855 48 25.56038173385658 25.4709240099893 24.372814841241528 24.595879414912595 49 24.763336883057114 25.565413917414514 24.73167477395038 24.93957442557799 50 24.892571035117545 25.776529915109265 24.50646892720874 24.824430122564454 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 126.0 1 82.0 2 38.0 3 111.5 4 185.0 5 215.5 6 246.0 7 211.5 8 177.0 9 283.5 10 390.0 11 591.0 12 792.0 13 1399.0 14 2006.0 15 2648.0 16 3290.0 17 3530.5 18 3771.0 19 3710.5 20 3650.0 21 4010.5 22 4371.0 23 4964.5 24 5558.0 25 6383.0 26 7208.0 27 9126.0 28 11044.0 29 12626.0 30 14208.0 31 16058.0 32 17908.0 33 20850.0 34 23792.0 35 28062.0 36 32332.0 37 37794.0 38 43256.0 39 46651.5 40 50047.0 41 54100.0 42 58153.0 43 59372.5 44 60592.0 45 66726.0 46 72860.0 47 77506.0 48 82152.0 49 84588.0 50 87024.0 51 84192.5 52 81361.0 53 80472.0 54 79583.0 55 79677.0 56 79771.0 57 77900.0 58 76029.0 59 69447.5 60 62866.0 61 54687.5 62 46509.0 63 40359.5 64 34210.0 65 28806.5 66 23403.0 67 20361.0 68 17319.0 69 15618.0 70 13917.0 71 10705.0 72 7493.0 73 6411.0 74 5329.0 75 4036.5 76 2744.0 77 2459.0 78 2174.0 79 1788.5 80 1403.0 81 1156.5 82 910.0 83 744.0 84 578.0 85 392.0 86 206.0 87 153.0 88 100.0 89 69.5 90 39.0 91 38.0 92 37.0 93 25.5 94 14.0 95 20.0 96 26.0 97 16.5 98 7.0 99 10.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007491859292179838 2 3.5675520438951605E-4 3 4.4594400548689505E-4 4 0.0 5 0.0 6 2.6756640329213705E-4 7 1.7837760219475802E-4 8 0.0 9 0.0011594544142659272 10 8.918880109737901E-4 11 8.918880109737901E-5 12 1.7837760219475802E-4 13 4.4594400548689505E-4 14 0.0 15 0.003745929646089919 16 8.918880109737901E-4 17 0.0 18 2.6756640329213705E-4 19 0.0 20 7.135104087790321E-4 21 0.0 22 1.7837760219475802E-4 23 0.0010702656131685482 24 2.6756640329213705E-4 25 9.81076812071169E-4 26 0.005172950463647983 27 0.005351328065842741 28 0.003835118447187297 29 0.0021405312263370964 30 0.0035675520438951604 31 0.006956726485595563 32 0.0028540416351161284 33 0.003924307248284676 34 0.003745929646089919 35 0.0025864752318239914 36 0.005529705668037498 37 0.003210796839505644 38 0.007135104087790321 39 0.003745929646089919 40 0.001962153624142338 41 0.0034783632427977814 42 0.0011594544142659272 43 0.0014270208175580642 44 8.918880109737901E-4 45 0.0018729648230449594 46 5.351328065842741E-4 47 0.002408097629629233 48 0.0015162096186554432 49 2.6756640329213705E-4 50 9.81076812071169E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1121217.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.14315091338552 #Duplication Level Percentage of deduplicated Percentage of total 1 76.10150253318244 40.442736338563044 2 13.862780227715335 14.73423643441146 3 4.472439940672541 7.1303865215464155 4 1.8874490640916557 4.012199618174044 5 0.9953661493648767 2.644844674488654 6 0.5995292262992737 1.9116523290124539 7 0.39242718298267354 1.459837190543408 8 0.27114592953870714 1.1527639242420569 9 0.20057606898541985 0.9593319873335213 >10 1.0451179309909968 9.893221951483934 >50 0.08028591348423798 2.9301385762060845 >100 0.0816011809425306 8.778991679087754 >500 0.007924079865884654 2.838822844339226 >1k 0.001854571883504919 1.1108359305680384 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1344 0.1198697486748774 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1202 0.10720493891904956 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1176 0.10488603009051771 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1171 0.10444008608503082 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1150 0.10256712126198587 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1126 0.10042659003564876 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 8.918880109737901E-5 0.0 0.0 11 0.0 0.0 8.918880109737901E-5 0.0 0.0 12 0.0 0.0 8.918880109737901E-5 0.0 0.0 13 0.0 0.0 8.918880109737901E-5 0.0 8.918880109737901E-5 14 0.0 0.0 8.918880109737901E-5 0.0 8.918880109737901E-5 15 0.0 0.0 8.918880109737901E-5 0.0 1.7837760219475802E-4 16 0.0 0.0 8.918880109737901E-5 0.0 1.7837760219475802E-4 17 0.0 0.0 8.918880109737901E-5 0.0 1.7837760219475802E-4 18 0.0 0.0 8.918880109737901E-5 0.0 2.6756640329213705E-4 19 0.0 0.0 8.918880109737901E-5 0.0 2.6756640329213705E-4 20 0.0 0.0 8.918880109737901E-5 0.0 2.6756640329213705E-4 21 0.0 0.0 8.918880109737901E-5 0.0 2.6756640329213705E-4 22 0.0 0.0 8.918880109737901E-5 2.6756640329213705E-4 2.6756640329213705E-4 23 0.0 0.0 8.918880109737901E-5 5.351328065842741E-4 2.6756640329213705E-4 24 0.0 0.0 8.918880109737901E-5 0.0013378320164606852 2.6756640329213705E-4 25 0.0 0.0 8.918880109737901E-5 0.0015162096186554432 2.6756640329213705E-4 26 0.0 0.0 8.918880109737901E-5 0.0015162096186554432 2.6756640329213705E-4 27 0.0 0.0 8.918880109737901E-5 0.0023189088285318544 4.4594400548689505E-4 28 0.0 0.0 8.918880109737901E-5 0.004459440054868951 4.4594400548689505E-4 29 0.0 0.0 8.918880109737901E-5 0.008294558502056248 4.4594400548689505E-4 30 0.0 0.0 8.918880109737901E-5 0.014894529783262294 4.4594400548689505E-4 31 0.0 0.0 8.918880109737901E-5 0.027380961936895355 4.4594400548689505E-4 32 0.0 0.0 8.918880109737901E-5 0.04307819093003406 4.4594400548689505E-4 33 0.0 0.0 8.918880109737901E-5 0.05824028711658849 4.4594400548689505E-4 34 0.0 0.0 8.918880109737901E-5 0.0717969848833901 4.4594400548689505E-4 35 0.0 0.0 8.918880109737901E-5 0.09409418515773485 4.4594400548689505E-4 36 0.0 0.0 8.918880109737901E-5 0.1245075663319411 4.4594400548689505E-4 37 0.0 0.0 8.918880109737901E-5 0.17222357491903886 4.4594400548689505E-4 38 0.0 0.0 8.918880109737901E-5 0.2311773724444064 4.4594400548689505E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2505 0.0 22.921993 1 AACGCAG 2935 0.0 19.488789 6 GTATAGT 80 8.988319E-5 19.249865 1 GTACTAT 115 2.0212246E-7 19.1303 1 GTCGTAA 100 2.4810006E-5 17.601446 30 GGTCGTA 100 2.4819517E-5 17.60066 29 ACCGTCG 440 0.0 17.499094 8 TACCGTC 460 0.0 17.21727 7 TAATACT 205 5.456968E-12 17.17061 4 TCAACGC 3325 0.0 17.13672 4 CAACGCA 3360 0.0 16.958214 5 ATCAACG 3375 0.0 16.948027 3 CCGTCGT 495 0.0 16.88877 9 TATCAAC 3450 0.0 16.833912 2 TAGCGGC 355 0.0 16.733768 30 GTGTATA 355 0.0 16.732275 1 ACTAGGG 80 0.0019883236 16.499884 3 CGCAGAG 3470 0.0 16.483297 8 ACGCAGA 3480 0.0 16.436665 7 CGTCGTA 485 0.0 16.329052 10 >>END_MODULE