##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064233_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 646765 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.107903179671133 32.0 32.0 32.0 32.0 32.0 2 30.836068742124265 32.0 32.0 32.0 32.0 32.0 3 30.86748046044545 32.0 32.0 32.0 32.0 32.0 4 30.850846907300177 32.0 32.0 32.0 32.0 32.0 5 30.8682380771996 32.0 32.0 32.0 32.0 32.0 6 34.37549496339474 36.0 36.0 36.0 32.0 36.0 7 34.27418304948474 36.0 36.0 36.0 32.0 36.0 8 34.23250948953638 36.0 36.0 36.0 32.0 36.0 9 34.31840776789097 36.0 36.0 36.0 32.0 36.0 10 34.088319559654586 36.0 36.0 36.0 32.0 36.0 11 34.368241942591204 36.0 36.0 36.0 32.0 36.0 12 34.20457816981438 36.0 36.0 36.0 32.0 36.0 13 34.280986138705714 36.0 36.0 36.0 32.0 36.0 14 34.177843575332616 36.0 36.0 36.0 32.0 36.0 15 34.12700594497228 36.0 36.0 36.0 32.0 36.0 16 34.14996482493641 36.0 36.0 36.0 32.0 36.0 17 34.08987808554885 36.0 36.0 36.0 32.0 36.0 18 34.07970282869358 36.0 36.0 36.0 32.0 36.0 19 34.05321716543103 36.0 36.0 36.0 32.0 36.0 20 33.98429568699605 36.0 36.0 36.0 32.0 36.0 21 33.95292107643425 36.0 36.0 36.0 32.0 36.0 22 33.92625915131462 36.0 36.0 36.0 32.0 36.0 23 33.89731046052275 36.0 36.0 36.0 32.0 36.0 24 33.855248815257475 36.0 36.0 36.0 32.0 36.0 25 33.24749174738893 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 4.0 5 8.0 6 22.0 7 8.0 8 36.0 9 36.0 10 67.0 11 17.0 12 38.0 13 39.0 14 174.0 15 309.0 16 472.0 17 599.0 18 835.0 19 936.0 20 1223.0 21 1494.0 22 1865.0 23 2593.0 24 3378.0 25 4456.0 26 6390.0 27 8435.0 28 11455.0 29 15876.0 30 22442.0 31 32226.0 32 49190.0 33 74045.0 34 161243.0 35 246853.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.769008873565994 17.69779143021096 11.841423482700646 24.691776213522402 2 15.631122154720137 20.566728877164934 38.99021073741861 24.81193823069632 3 18.960444185374108 25.633274939428563 28.90482824306502 26.501452632132317 4 11.953533535576563 15.744666375980678 36.41800645075501 35.88379363768775 5 13.357919314685098 37.95874503254936 33.85257688917753 14.830758763588006 6 32.55051926443209 36.1853702890438 17.679268390744166 13.584842055779948 7 28.559719657675547 31.272520328220736 21.552862652674293 18.614897361429424 8 27.87159340489374 33.19423392210845 19.99412256008909 18.940050112908715 9 27.440425087593106 14.145454826708741 19.42238825594976 38.9917318297484 10 15.649776685916903 27.60044492643089 32.30667126650877 24.44310712114344 11 36.21330866359533 21.69070212838371 23.33579824444699 18.76019096357398 12 24.39794172341986 24.36792776847792 30.16448884997045 21.069641658131772 13 29.52140044711579 20.10721496368151 26.416807840771085 23.954576748431613 14 23.22002404296171 20.280408389972507 26.85122295746995 29.648344609595835 15 24.28717739265503 27.90010117981231 24.41759724246334 23.395124185069324 16 23.967150568660912 26.325341188811514 26.138443519926724 23.56906472260085 17 22.278469262247526 26.207734139907636 27.04365248199519 24.47014411584965 18 22.835480252214616 25.8533905845035 28.86310007349812 22.44802908978376 19 24.449983676286053 25.132175664823862 27.37494565208982 23.042895006800258 20 24.599234987559264 25.140654593169355 27.151442754044787 23.108667665226594 21 25.824170723178284 24.538671733566872 26.269174947314344 23.367982595940497 22 24.3516365172425 25.220608373138 26.759412701286283 23.668342408333217 23 23.609331575461596 25.04858906034328 27.296529441256755 24.04554992293837 24 23.518780704808325 26.273799853003755 27.062009206607097 23.14541023558083 25 23.92354862618701 25.47832397445638 27.314561938022518 23.283565461334092 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 229.0 1 229.0 2 514.0 3 799.0 4 799.0 5 799.0 6 2469.0 7 4139.0 8 4139.0 9 4139.0 10 3915.0 11 3691.0 12 3691.0 13 3691.0 14 2983.0 15 2275.0 16 2275.0 17 2275.0 18 4115.0 19 5955.0 20 5955.0 21 5955.0 22 9412.5 23 12870.0 24 12870.0 25 12870.0 26 19517.0 27 26164.0 28 26164.0 29 26164.0 30 32558.5 31 38953.0 32 38953.0 33 38953.0 34 42570.0 35 46187.0 36 46187.0 37 46187.0 38 49944.0 39 53701.0 40 53701.0 41 53701.0 42 60332.0 43 66963.0 44 66963.0 45 66963.0 46 76538.0 47 86113.0 48 86113.0 49 86113.0 50 84806.5 51 83500.0 52 83500.0 53 83500.0 54 75133.5 55 66767.0 56 66767.0 57 66767.0 58 60534.0 59 54301.0 60 54301.0 61 54301.0 62 47658.5 63 41016.0 64 41016.0 65 41016.0 66 33446.0 67 25876.0 68 25876.0 69 25876.0 70 19567.5 71 13259.0 72 13259.0 73 13259.0 74 10088.5 75 6918.0 76 6918.0 77 6918.0 78 5502.5 79 4087.0 80 4087.0 81 4087.0 82 2783.0 83 1479.0 84 1479.0 85 1479.0 86 1134.0 87 789.0 88 789.0 89 789.0 90 539.0 91 289.0 92 289.0 93 289.0 94 183.5 95 78.0 96 78.0 97 78.0 98 222.5 99 367.0 100 367.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03679852805887764 2 0.005566163908065526 3 0.0012369253129034502 4 0.0029376976181456943 5 0.00850386152621122 6 0.012523868793147434 7 0.019636189342342274 8 0.03478852442540954 9 0.0479308558750087 10 0.056589333065332856 11 0.05550702341654233 12 0.06169164998105958 13 0.06184626564517251 14 0.065247810255657 15 0.060454724668156136 16 0.065247810255657 17 0.06339242228630182 18 0.07576167541533632 19 0.07205089947662598 20 0.07746244772057857 21 0.07406090311009408 22 0.07483398143065874 23 0.08179168631574064 24 0.07576167541533632 25 0.07699860072823977 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 646765.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.031376400473604 #Duplication Level Percentage of deduplicated Percentage of total 1 76.98174045105749 40.82447653823595 2 13.78812991236825 14.624070144828597 3 4.15785082410817 6.614896562108992 4 1.7483197072736156 3.7086320185917176 5 0.8850397459087407 2.346743794733297 6 0.508899914449219 1.619259774799521 7 0.3296729865129276 1.2238108565784727 8 0.22648933768266186 0.9608833053874568 9 0.16997688875566377 0.8112697530284733 >10 0.9900993424414938 9.830497142025024 >50 0.12482705504559385 4.682081197817369 >100 0.083995751823297 8.704660188459505 >500 0.0029165191605302772 1.1917094305627196 >1k 0.002041563412371194 2.8570092928429016 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4220 0.65247810255657 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3422 0.5290948025944509 No Hit TATCAACGCAGAGTACTTTTTTTTT 3328 0.5145609301678353 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2349 0.3631921950012756 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1847 0.28557513161658404 No Hit GTACATGGGGTGGTATCAACGCAAA 1829 0.28279204966255134 No Hit GGTATCAACGCAGAGTACTTTTTTT 1477 0.2283673358947995 No Hit GTATCAACGCAGAGTACATGGGGTG 995 0.15384258579236662 No Hit GTACATGGGTGGTATCAACGCAAAA 969 0.1498225785254304 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 873 0.13497947477058903 No Hit TATCAACGCAGAGTACATGGGGTGG 763 0.11797175171816655 No Hit GTACATGGAAGCAGTGGTATCAACG 756 0.11688944206937604 No Hit GTACATGGGAGTGGTATCAACGCAA 744 0.11503405410002088 No Hit TTGTAGAACAGTGTATATCAATGAG 708 0.10946789019195535 No Hit GATATACACTGTTCTACAAATCCCG 690 0.10668480823792259 No Hit TCCATGTACTCTGCGTTGATACCAC 655 0.10127325999396998 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.5461566411293127E-4 13 0.0 0.0 0.0 0.0 3.0923132822586254E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 25 0.0060246657 19.002012 7 CTATAGC 40 2.7606438E-4 16.622902 4 TACCGTC 55 1.1251457E-5 15.5471 7 ATACCGT 55 1.1259712E-5 15.545898 6 CGGTCGG 40 0.0052709845 14.251509 10 GTCGGCG 40 0.0052709845 14.251509 12 TCCAACG 80 1.2839882E-7 14.250406 18 CCGTCGT 55 1.9556083E-4 13.819645 9 ACCGTCG 55 1.9556083E-4 13.819645 8 AGAACCG 55 1.9581773E-4 13.817506 5 CGTCGTA 65 5.4374766E-5 13.155239 10 CCCTTAA 65 5.449333E-5 13.152185 1 TCGTTAA 80 1.9918825E-6 13.063883 12 TTACACA 80 1.997083E-6 13.060852 4 TTAGGAC 140 3.6379788E-12 12.891231 3 ATCCTCG 90 5.3816984E-7 12.668009 8 GACGTGA 105 1.9823347E-8 12.668008 7 CGACCCG 60 4.087967E-4 12.666048 5 ATTTAGA 60 4.090636E-4 12.665068 1 CTCTTAA 120 7.385097E-10 12.665068 1 >>END_MODULE