##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064230_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 614600 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14994630654084 32.0 32.0 32.0 32.0 32.0 2 30.744536283761796 32.0 32.0 32.0 32.0 32.0 3 30.761688903351775 32.0 32.0 32.0 32.0 32.0 4 30.79761958997722 32.0 32.0 32.0 32.0 32.0 5 30.685676863000324 32.0 32.0 32.0 32.0 32.0 6 34.32287178652782 36.0 36.0 36.0 32.0 36.0 7 34.24095509274325 36.0 36.0 36.0 32.0 36.0 8 34.170561340709405 36.0 36.0 36.0 32.0 36.0 9 34.34624471200781 36.0 36.0 36.0 32.0 36.0 10 34.01602180279857 36.0 36.0 36.0 32.0 36.0 11 34.33723071916694 36.0 36.0 36.0 32.0 36.0 12 34.13857630979499 36.0 36.0 36.0 32.0 36.0 13 34.23223885453954 36.0 36.0 36.0 32.0 36.0 14 34.11682883176049 36.0 36.0 36.0 32.0 36.0 15 34.0501871135698 36.0 36.0 36.0 32.0 36.0 16 34.05341197526847 36.0 36.0 36.0 32.0 36.0 17 33.97420436055971 36.0 36.0 36.0 32.0 36.0 18 33.9643735763098 36.0 36.0 36.0 32.0 36.0 19 33.98105109013993 36.0 36.0 36.0 32.0 36.0 20 33.95664497233973 36.0 36.0 36.0 32.0 36.0 21 33.92719817767654 36.0 36.0 36.0 32.0 36.0 22 33.90636674259681 36.0 36.0 36.0 32.0 36.0 23 33.869448421737715 36.0 36.0 36.0 32.0 36.0 24 33.84490562967784 36.0 36.0 36.0 32.0 36.0 25 33.44526521314676 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 5.0 5 10.0 6 22.0 7 13.0 8 39.0 9 42.0 10 65.0 11 17.0 12 44.0 13 29.0 14 73.0 15 130.0 16 213.0 17 269.0 18 390.0 19 476.0 20 700.0 21 1080.0 22 1630.0 23 2467.0 24 3769.0 25 5407.0 26 7377.0 27 9961.0 28 13679.0 29 18300.0 30 23808.0 31 32381.0 32 45281.0 33 62798.0 34 128764.0 35 255361.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.54839003714422 17.24406782971603 11.290737382845945 25.9168047502938 2 16.58091453750801 20.124413810160732 37.48718599587999 25.807485656451263 3 18.796982694097508 24.624952000364473 28.503322551042327 28.074742754495695 4 12.523186868259536 15.327414851311156 36.111309984834975 36.038088295594335 5 14.434791381563212 36.95380144269807 33.525562897958324 15.0858442777804 6 33.350365652430035 35.75029535343147 17.263123293377898 13.636215700760596 7 29.707490222820415 30.69896051858518 21.252976282507188 18.34057297608721 8 28.09845789235522 32.52636102312347 19.93313301451606 19.442048070005242 9 27.76182429682591 13.854133091100888 18.60436343983096 39.77967917224225 10 15.68936464650576 26.710244617200534 32.082705848833896 25.517684887459808 11 36.899798284358816 21.218889961594254 22.849709636928125 19.031602117118805 12 24.770549590107215 23.678858975715787 29.262030170062765 22.288561264114232 13 29.67153379746918 19.565507629585728 25.553739245963776 25.209219326981312 14 23.639318157024483 19.583039571185964 25.722492058245507 31.055150213544046 15 24.894903597862577 27.320505765241826 22.8467041572913 24.937886479604295 16 25.187855459979257 25.69113713000819 24.35127790559276 24.769729504419793 17 23.547684908557184 25.946868248430093 25.638015724289286 24.86743111872343 18 24.21607468235087 25.00858951249021 26.865715388335527 23.909620416823397 19 25.404116805103914 24.77264104397045 25.91981658218222 23.903425568743415 20 25.591108939912065 24.169842045269498 25.47907506920697 24.759973945611463 21 26.512049006948185 24.044278207572827 24.985304103289764 24.458368682189224 22 25.64520515154525 24.381581711330437 25.357144601836488 24.616068535287823 23 24.243011474112407 24.411556838056402 25.874563166242726 25.470868521588464 24 24.596931123707662 24.9369403404326 25.87929347126938 24.58683506459035 25 24.70839202403537 24.603522256328418 25.834113614343057 24.853972105293153 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 203.0 1 203.0 2 328.5 3 454.0 4 454.0 5 454.0 6 1292.5 7 2131.0 8 2131.0 9 2131.0 10 2080.5 11 2030.0 12 2030.0 13 2030.0 14 1916.0 15 1802.0 16 1802.0 17 1802.0 18 3080.5 19 4359.0 20 4359.0 21 4359.0 22 6888.5 23 9418.0 24 9418.0 25 9418.0 26 13859.0 27 18300.0 28 18300.0 29 18300.0 30 23113.0 31 27926.0 32 27926.0 33 27926.0 34 33540.5 35 39155.0 36 39155.0 37 39155.0 38 44541.0 39 49927.0 40 49927.0 41 49927.0 42 57123.0 43 64319.0 44 64319.0 45 64319.0 46 72025.0 47 79731.0 48 79731.0 49 79731.0 50 81669.0 51 83607.0 52 83607.0 53 83607.0 54 77196.5 55 70786.0 56 70786.0 57 70786.0 58 64799.5 59 58813.0 60 58813.0 61 58813.0 62 51192.5 63 43572.0 64 43572.0 65 43572.0 66 35801.0 67 28030.0 68 28030.0 69 28030.0 70 21322.5 71 14615.0 72 14615.0 73 14615.0 74 11158.0 75 7701.0 76 7701.0 77 7701.0 78 6023.0 79 4345.0 80 4345.0 81 4345.0 82 2969.5 83 1594.0 84 1594.0 85 1594.0 86 1238.5 87 883.0 88 883.0 89 883.0 90 630.5 91 378.0 92 378.0 93 378.0 94 270.5 95 163.0 96 163.0 97 163.0 98 260.5 99 358.0 100 358.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0387243735763098 2 0.006182883176049463 3 0.0019524894240156199 4 0.004555808656036447 5 0.009274324764074193 6 0.013342011064106736 7 0.02587048486820696 8 0.04002603319232021 9 0.051090139928408725 10 0.06101529450048812 11 0.06003904978848032 12 0.06752359258054019 13 0.06703547022453628 14 0.07175398633257403 15 0.06540839570452327 16 0.07012691181256102 17 0.06361861373250895 18 0.0779368695086235 19 0.07858769931662869 20 0.08135372600065083 21 0.07858769931662869 22 0.08021477383664172 23 0.08493328994467947 24 0.08119101854864953 25 0.08216726326065735 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 614600.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.79677795460131 #Duplication Level Percentage of deduplicated Percentage of total 1 79.03878826172908 46.47226083225633 2 12.977370266551791 15.260551159941818 3 3.7082945747090923 6.541073180982695 4 1.4746778905946885 3.4682523395142293 5 0.7631239198320894 2.2434613833106165 6 0.4473038107804955 1.5780013704424678 7 0.2865923052171142 1.179549289334359 8 0.2063043972266325 0.970402706783374 9 0.1443960945897591 0.7641022599995105 >10 0.7972029060419668 8.603056850706144 >50 0.08296750250559136 3.44346951367523 >100 0.0702032386543702 7.69420849469067 >500 0.0016648989404182515 0.662230540286954 >1k 0.0011099326269455008 1.1193800780755832 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2341 0.38089814513504716 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1676 0.2726976895541816 No Hit TATCAACGCAGAGTACTTTTTTTTT 1670 0.27172144484217375 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1174 0.19101854864952816 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 912 0.1483891962251871 No Hit GGTATCAACGCAGAGTACTTTTTTT 796 0.12951513179303611 No Hit GTACATGGGGTGGTATCAACGCAAA 773 0.12577286039700616 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.6270745200130165E-4 0.0 5 0.0 0.0 0.0 1.6270745200130165E-4 0.0 6 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 7 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 8 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 9 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 10 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 11 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 12 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 13 0.0 0.0 0.0 1.6270745200130165E-4 3.254149040026033E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTGCGC 35 9.917399E-5 19.002443 17 ATTTGCG 35 9.917399E-5 19.002443 16 GTAAACG 40 2.7550044E-4 16.627136 17 AACGTCT 45 6.7558506E-4 14.777271 6 CGAACGT 45 6.7558506E-4 14.777271 4 GTAATTT 45 6.7558506E-4 14.777271 13 CTTGTAC 45 6.764196E-4 14.774866 3 TCGAACG 45 6.764196E-4 14.774866 3 GCGTTAT 45 6.7683717E-4 14.773664 1 TGTTCAA 65 3.3624638E-6 14.616074 10 AGAACCG 60 2.5641037E-5 14.249513 5 CGAAGAC 60 2.5641037E-5 14.249513 4 GGATTAT 40 0.005284049 14.246033 1 AGACGAT 55 1.9563339E-4 13.818833 7 AGTTAAA 90 3.6185156E-8 13.723987 17 CGAGCCG 105 1.3606041E-9 13.573173 15 TAGAGTG 85 2.6911584E-7 13.411304 5 TAAACGC 50 0.0014962975 13.301709 18 TTGCGCG 50 0.0014962975 13.301709 18 ACGTCTG 50 0.0014972159 13.300626 7 >>END_MODULE