##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064230_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 614600 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15026684022128 32.0 32.0 32.0 32.0 32.0 2 31.272959648551904 32.0 32.0 32.0 32.0 32.0 3 31.391480637813213 32.0 32.0 32.0 32.0 32.0 4 31.502993817116824 32.0 32.0 32.0 32.0 32.0 5 31.41482753010088 32.0 32.0 32.0 32.0 32.0 6 35.004770582492675 36.0 36.0 36.0 36.0 36.0 7 35.02774324764074 36.0 36.0 36.0 36.0 36.0 8 34.968496583143505 36.0 36.0 36.0 36.0 36.0 9 35.093434754311744 36.0 36.0 36.0 36.0 36.0 10 34.922806703547025 36.0 36.0 36.0 32.0 36.0 11 35.12133094695737 36.0 36.0 36.0 36.0 36.0 12 34.99637162382037 36.0 36.0 36.0 36.0 36.0 13 35.04770094370322 36.0 36.0 36.0 36.0 36.0 14 34.988060527172145 36.0 36.0 36.0 36.0 36.0 15 34.94901236576635 36.0 36.0 36.0 36.0 36.0 16 34.97007484542792 36.0 36.0 36.0 36.0 36.0 17 34.926609176700296 36.0 36.0 36.0 36.0 36.0 18 34.92206638464042 36.0 36.0 36.0 36.0 36.0 19 34.929700618288315 36.0 36.0 36.0 36.0 36.0 20 34.91389033517735 36.0 36.0 36.0 32.0 36.0 21 34.918462414578585 36.0 36.0 36.0 32.0 36.0 22 34.89404978848031 36.0 36.0 36.0 32.0 36.0 23 34.838509599739666 36.0 36.0 36.0 32.0 36.0 24 34.81783110966482 36.0 36.0 36.0 32.0 36.0 25 34.79676700292873 36.0 36.0 36.0 32.0 36.0 26 34.72327692808331 36.0 36.0 36.0 32.0 36.0 27 34.72795476732834 36.0 36.0 36.0 32.0 36.0 28 34.7047396680768 36.0 36.0 36.0 32.0 36.0 29 34.66475105759844 36.0 36.0 36.0 32.0 36.0 30 34.64496257728604 36.0 36.0 36.0 32.0 36.0 31 34.631900423039376 36.0 36.0 36.0 32.0 36.0 32 34.57861861373251 36.0 36.0 36.0 32.0 36.0 33 34.55176537585422 36.0 36.0 36.0 32.0 36.0 34 34.53376830458835 36.0 36.0 36.0 32.0 36.0 35 34.49013667425968 36.0 36.0 36.0 32.0 36.0 36 34.44751871135698 36.0 36.0 36.0 32.0 36.0 37 34.43943703221608 36.0 36.0 36.0 32.0 36.0 38 34.400569476082005 36.0 36.0 36.0 32.0 36.0 39 34.3874227139603 36.0 36.0 36.0 32.0 36.0 40 34.35108525870485 36.0 36.0 36.0 32.0 36.0 41 34.330553205336805 36.0 36.0 36.0 32.0 36.0 42 34.27368206963879 36.0 36.0 36.0 32.0 36.0 43 34.24905629677839 36.0 36.0 36.0 32.0 36.0 44 34.16388219980475 36.0 36.0 36.0 32.0 36.0 45 34.117948259030264 36.0 36.0 36.0 32.0 36.0 46 34.08629352424341 36.0 36.0 36.0 32.0 36.0 47 34.03397006182883 36.0 36.0 36.0 32.0 36.0 48 33.97889684347543 36.0 36.0 36.0 32.0 36.0 49 33.95875854214123 36.0 36.0 36.0 32.0 36.0 50 33.326954116498534 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 4.0 21 15.0 22 65.0 23 199.0 24 536.0 25 1229.0 26 2589.0 27 4767.0 28 8073.0 29 12027.0 30 17100.0 31 24715.0 32 35382.0 33 56772.0 34 114473.0 35 336651.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.59715367579697 18.266788382336905 11.917233344235672 26.21882459763045 2 15.844314748315568 21.027206357315908 36.942787085563104 26.185691808805416 3 18.061858219749787 25.189920582363463 28.940658868628162 27.80756232925859 4 12.208428246013668 16.04881223560039 36.28246013667426 35.460299381711685 5 14.053205336804425 37.35112268141881 33.30507647250244 15.290595509274324 6 33.488122356003906 36.219329645297755 16.940611780019523 13.351936218678814 7 29.438869897282615 30.887456699408883 21.291118273866374 18.382555129442125 8 28.063130491376505 32.79645297754637 19.69720143182558 19.443215099251546 9 27.884984607774864 13.699568497028944 18.425111780747027 39.99033511444917 10 15.569678746225138 26.94372852233677 32.171912423201086 25.31468030823701 11 37.178001952489424 21.16108037748129 22.699967458509597 18.960950211519688 12 24.692808330621542 23.9123006833713 29.04848682069639 22.34640416531077 13 29.752992611418538 19.568920772473668 25.409007853927047 25.269078762180747 14 23.515820884837105 19.5587692137475 25.76135008355041 31.16405981786498 15 25.03050893789845 27.370666510460907 22.752996384487467 24.845828167153183 16 25.26456403881574 25.68955866943488 24.18011181328873 24.86576547846065 17 23.52375528799219 25.90872111942727 25.490562967783926 25.07696062479662 18 24.329359468531514 24.96001457861142 26.858488217520694 23.852137735336374 19 25.411569839146892 24.74218920334918 26.06484238477834 23.781398572725585 20 25.775673410945423 24.05047226222146 25.571636606220356 24.602217720612764 21 26.680930686625448 24.05711031565246 25.052229092092414 24.20972990562968 22 25.792222583794338 24.350959973966805 25.29238529124634 24.564432150992516 23 24.309262817748866 24.180072470252863 26.02599752358049 25.484667188417774 24 24.75817486906054 24.899242918530355 25.883139683402295 24.45944252900681 25 24.73946002938549 24.429659496020918 26.031705741560618 24.79917473303297 26 24.4773928791678 25.113617318322124 26.193083540662226 24.21590626184785 27 24.916526730972 24.937842517020087 25.55616302833861 24.58946772366931 28 24.16173778627507 24.851157303827847 26.090875808485535 24.896229101411542 29 24.279319810020617 24.87581212281949 26.001760514682076 24.843107552477818 30 24.23016656876799 25.16234637907778 26.141061959286084 24.46642509286815 31 24.719026163476574 24.915752596577384 25.370875701112507 24.99434553883354 32 24.456054827330355 25.16856930867058 25.307525090142274 25.067850773856787 33 24.196464165710708 24.664274730907227 25.890345203517935 25.248915899864134 34 24.809221166769174 24.72526220903177 26.133039151558933 24.332477472640118 35 25.339054341441347 24.6167689321273 25.924985803243533 24.11919092318782 36 24.415632174930398 25.22158381783182 25.539213054040903 24.823570953196878 37 25.144164432063732 25.310457941735443 25.28149488427794 24.263882741922888 38 24.613134077721405 25.035879678596185 25.52436401032293 24.826622233359476 39 24.942236598890943 25.072895785061572 25.188422587279685 24.7964450287678 40 25.15982277529463 25.09929432285421 25.717595718750967 24.023287183100194 41 24.302115944104187 25.35585740970952 25.982635069609415 24.35939157657687 42 25.285067166510466 25.794998958658756 25.20468863896699 23.715245235863794 43 24.51516537014047 24.763135158178365 25.638514068705852 25.08318540297531 44 24.163510101010104 25.609184629803188 25.170194210142665 25.057111059044047 45 24.439060583084117 25.582742428334804 25.11039808393834 24.86779890464274 46 24.184993068617434 25.431340262546453 25.151807040722684 25.23185962811343 47 24.47615142551246 25.332825674519103 25.56306196366334 24.62796093630509 48 25.126588045402475 25.744884411121525 24.580372019160677 24.54815552431532 49 24.49113078792967 25.771154478211773 24.895622829882296 24.842091903976257 50 24.4345805645408 26.137998138590408 24.733479989846856 24.69394130702194 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 116.0 1 74.5 2 33.0 3 119.0 4 205.0 5 201.5 6 198.0 7 186.5 8 175.0 9 257.5 10 340.0 11 480.0 12 620.0 13 1098.0 14 1576.0 15 2071.0 16 2566.0 17 2720.0 18 2874.0 19 2888.0 20 2902.0 21 3068.0 22 3234.0 23 3566.5 24 3899.0 25 4056.0 26 4213.0 27 5077.0 28 5941.0 29 6953.5 30 7966.0 31 9147.0 32 10328.0 33 12037.5 34 13747.0 35 15731.5 36 17716.0 37 20527.5 38 23339.0 39 25113.0 40 26887.0 41 29055.5 42 31224.0 43 31993.5 44 32763.0 45 35997.5 46 39232.0 47 41400.0 48 43568.0 49 45182.5 50 46797.0 51 45825.5 52 44854.0 53 44276.5 54 43699.0 55 43774.5 56 43850.0 57 42098.5 58 40347.0 59 36816.0 60 33285.0 61 29459.5 62 25634.0 63 22180.0 64 18726.0 65 15954.0 66 13182.0 67 11259.5 68 9337.0 69 8277.0 70 7217.0 71 5697.0 72 4177.0 73 3591.5 74 3006.0 75 2395.0 76 1784.0 77 1515.5 78 1247.0 79 999.5 80 752.0 81 628.0 82 504.0 83 402.5 84 301.0 85 205.5 86 110.0 87 83.0 88 56.0 89 36.0 90 16.0 91 15.5 92 15.0 93 12.0 94 9.0 95 11.0 96 13.0 97 9.5 98 6.0 99 10.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008623494956068989 2 1.6270745200130165E-4 3 1.6270745200130165E-4 4 0.0 5 0.0 6 0.0 7 1.6270745200130165E-4 8 0.0 9 6.508298080052066E-4 10 0.0013016596160104132 11 0.0 12 0.0 13 4.8812235600390497E-4 14 1.6270745200130165E-4 15 0.004230393752033843 16 6.508298080052066E-4 17 0.0 18 1.6270745200130165E-4 19 3.254149040026033E-4 20 8.135372600065082E-4 21 0.0 22 0.0 23 4.8812235600390497E-4 24 4.8812235600390497E-4 25 0.0017897819720143183 26 0.006020175724048161 27 0.005206638464041653 28 0.004067686300032541 29 0.0011389521640091118 30 0.0030914415880247317 31 0.006671005532053368 32 0.0026033192320208264 33 0.0056947608200455585 34 0.0022779043280182236 35 0.0037422713960299386 36 0.007647250244061178 37 0.0039049788480312398 38 0.007484542792059877 39 0.0039049788480312398 40 0.0021151968760169215 41 0.004555808656036447 42 0.0013016596160104132 43 0.001464367068011715 44 0.0013016596160104132 45 9.762447120078099E-4 46 6.508298080052066E-4 47 0.0022779043280182236 48 0.0013016596160104132 49 3.254149040026033E-4 50 0.0019524894240156199 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 614600.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.59525019001158 #Duplication Level Percentage of deduplicated Percentage of total 1 80.14691070788913 50.16815927716839 2 12.528777301710194 15.68483899550976 3 3.4785305124098285 6.532184631536471 4 1.3629959326443575 3.412682856473669 5 0.6839177923915257 2.1405002662073978 6 0.40734461233769625 1.5298702753698827 7 0.27019736072839773 1.1839149976832406 8 0.17656282197416054 0.8841595212581642 9 0.13480424125179138 0.7594294687047506 >10 0.6828354458478767 7.791444333901504 >50 0.0736114516050914 3.2345584394574063 >100 0.05194561962328655 6.134970473757546 >500 0.0015661995866263292 0.5432864629718716 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 652 0.10608525870484868 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6270745200130165E-4 2 0.0 0.0 0.0 0.0 1.6270745200130165E-4 3 0.0 0.0 0.0 0.0 1.6270745200130165E-4 4 0.0 0.0 0.0 1.6270745200130165E-4 1.6270745200130165E-4 5 0.0 0.0 0.0 1.6270745200130165E-4 1.6270745200130165E-4 6 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 7 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 8 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 9 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 10 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 11 0.0 0.0 0.0 1.6270745200130165E-4 6.508298080052066E-4 12 0.0 0.0 0.0 1.6270745200130165E-4 9.762447120078099E-4 13 0.0 0.0 0.0 1.6270745200130165E-4 0.0011389521640091116 14 0.0 0.0 0.0 1.6270745200130165E-4 0.0011389521640091116 15 0.0 0.0 0.0 1.6270745200130165E-4 0.0011389521640091116 16 0.0 0.0 0.0 1.6270745200130165E-4 0.0011389521640091116 17 0.0 0.0 0.0 1.6270745200130165E-4 0.0011389521640091116 18 0.0 0.0 0.0 1.6270745200130165E-4 0.0013016596160104132 19 0.0 0.0 0.0 1.6270745200130165E-4 0.0013016596160104132 20 0.0 0.0 0.0 4.8812235600390497E-4 0.0013016596160104132 21 0.0 0.0 0.0 6.508298080052066E-4 0.001464367068011715 22 0.0 0.0 0.0 9.762447120078099E-4 0.0016270745200130166 23 0.0 0.0 0.0 0.0026033192320208264 0.0017897819720143183 24 0.0 0.0 0.0 0.004230393752033843 0.0017897819720143183 25 0.0 0.0 0.0 0.005532053368044257 0.0019524894240156199 26 0.0 0.0 0.0 0.007159127888057273 0.0019524894240156199 27 0.0 0.0 0.0 0.010087862024080702 0.0021151968760169215 28 0.0 0.0 0.0 0.015457207940123658 0.0021151968760169215 29 0.0 0.0 0.0 0.024243410348193946 0.0021151968760169215 30 0.0 0.0 0.0 0.04490725675235926 0.0021151968760169215 31 0.0 0.0 0.0 0.07207940123657663 0.0021151968760169215 32 0.0 0.0 0.0 0.10218027985681744 0.0021151968760169215 33 0.0 0.0 0.0 0.13163032866905305 0.0021151968760169215 34 0.0 0.0 0.0 0.1657988935893264 0.002277904328018223 35 0.0 0.0 0.0 0.20826553856166613 0.002277904328018223 36 0.0 0.0 0.0 0.2660266840221282 0.002277904328018223 37 0.0 0.0 0.0 0.34575333550276605 0.002277904328018223 38 0.0 0.0 0.0 0.44956068987959646 0.002277904328018223 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTC 105 1.1277734E-10 25.143602 7 CTATTAG 45 0.0013965291 24.447157 1 GTCCTAA 115 3.4924597E-10 22.95907 1 TCTAATC 80 3.60983E-6 22.000652 3 ACCGTCG 120 5.966285E-10 21.99886 8 TGGTCGG 145 1.2732926E-11 21.242008 37 ATACCGT 125 9.931682E-10 21.120625 6 GTATTAC 55 0.004478271 20.002218 1 GTTATAT 55 0.004478271 20.002218 1 CGTTTAT 145 2.9467628E-10 19.723116 31 GATATAC 105 1.7878647E-6 18.859236 1 CTAGTAC 70 8.115504E-4 18.857702 3 TCCTACA 175 9.094947E-12 18.8577 2 CGGCATC 165 8.185452E-11 18.66722 25 GACAGTC 95 1.5946223E-5 18.526865 7 TAGCGTA 85 1.4290598E-4 18.118183 7 CGTCGTA 135 5.5157216E-8 17.924997 10 TAGGACA 160 1.0968506E-9 17.87553 4 TCGTTTA 160 1.0986696E-9 17.874075 30 CATCGTT 185 2.1827873E-11 17.836914 28 >>END_MODULE