##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064228_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1280818 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21269844739846 32.0 32.0 32.0 32.0 32.0 2 30.898371197156816 32.0 32.0 32.0 32.0 32.0 3 30.92281885482559 32.0 32.0 32.0 32.0 32.0 4 30.94535523392082 32.0 32.0 32.0 32.0 32.0 5 30.88365716284437 32.0 32.0 32.0 32.0 32.0 6 34.484725386432736 36.0 36.0 36.0 32.0 36.0 7 34.42623542142599 36.0 36.0 36.0 32.0 36.0 8 34.38808714430934 36.0 36.0 36.0 32.0 36.0 9 34.498509546243106 36.0 36.0 36.0 32.0 36.0 10 34.26578483437928 36.0 36.0 36.0 32.0 36.0 11 34.463718498646955 36.0 36.0 36.0 32.0 36.0 12 34.33408649784747 36.0 36.0 36.0 32.0 36.0 13 34.396103896103895 36.0 36.0 36.0 32.0 36.0 14 34.31715591130043 36.0 36.0 36.0 32.0 36.0 15 34.266634291523076 36.0 36.0 36.0 32.0 36.0 16 34.2601275122617 36.0 36.0 36.0 32.0 36.0 17 34.18739508657748 36.0 36.0 36.0 32.0 36.0 18 34.188552940386536 36.0 36.0 36.0 32.0 36.0 19 34.191781345983586 36.0 36.0 36.0 32.0 36.0 20 34.17451894023975 36.0 36.0 36.0 32.0 36.0 21 34.14542737531796 36.0 36.0 36.0 32.0 36.0 22 34.13804147037284 36.0 36.0 36.0 32.0 36.0 23 34.08820300776535 36.0 36.0 36.0 32.0 36.0 24 34.07167138500552 36.0 36.0 36.0 32.0 36.0 25 33.677456125694675 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 14.0 5 15.0 6 53.0 7 22.0 8 68.0 9 77.0 10 126.0 11 51.0 12 86.0 13 66.0 14 119.0 15 229.0 16 384.0 17 495.0 18 598.0 19 813.0 20 1189.0 21 1727.0 22 2633.0 23 3999.0 24 6009.0 25 8801.0 26 12952.0 27 17377.0 28 24304.0 29 33610.0 30 45206.0 31 62608.0 32 89657.0 33 127499.0 34 272364.0 35 567661.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.9956558651678 17.116297378757476 11.011858503983687 25.876188252091037 2 16.964707480677383 19.393513034909933 37.33319383206598 26.308585652346707 3 18.95051038652586 23.451234156312413 28.541670245176036 29.05658521198569 4 12.409078274665593 14.725181374983212 36.13008404306153 36.735656307289666 5 14.526109814498 36.47995177588278 33.51989986624366 15.47403854337555 6 34.32296563291594 35.89084866676453 16.372153385328005 13.41403231499152 7 30.358353299118175 30.42371716578526 20.576966929163373 18.640962605933193 8 28.397827165122173 32.88790999371268 19.12461778178708 19.589645059378064 9 27.520826742592007 13.544315168273831 18.57358782382509 40.361270265309074 10 15.83946640876632 26.406844566867253 31.41410582611569 26.339583198250736 11 37.726262503954786 20.916338240521213 22.283502396306524 19.07389685921748 12 24.453612854385042 23.564159034499248 28.98158514186339 23.00064296925232 13 29.3042888593406 19.35478830700289 25.598157520152125 25.742765313504385 14 23.343195474300753 19.512898258487052 25.183850672550097 31.9600555946621 15 25.262396398831587 27.221023898677295 22.207387488877206 25.309192213613912 16 25.64674687085688 25.803545828343033 23.785862780990062 24.76384451981003 17 23.690197359066627 25.877772065981148 25.269726141052907 25.162304433899322 18 24.458138778980004 24.959917115157428 26.54885580162644 24.033088304236127 19 25.615933281610015 24.496068793573183 25.528659952011388 24.359337972805413 20 25.540677699911473 24.174713965693854 25.221103756830015 25.06350457756466 21 27.07163456317082 23.710045778051068 24.440588153024798 24.777731505753316 22 25.69341023914039 24.056401064513054 25.236241575079266 25.01394712126729 23 24.21818960357435 24.171150489222416 25.96574739839317 25.64491250881007 24 24.673970029698395 24.814375243677663 25.48366353691438 25.027991189709553 25 24.515490853629952 24.505177161109255 25.631010460584502 25.348321524676294 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 78.0 1 78.0 2 257.0 3 436.0 4 436.0 5 436.0 6 1496.0 7 2556.0 8 2556.0 9 2556.0 10 2635.0 11 2714.0 12 2714.0 13 2714.0 14 3027.0 15 3340.0 16 3340.0 17 3340.0 18 5517.0 19 7694.0 20 7694.0 21 7694.0 22 12402.5 23 17111.0 24 17111.0 25 17111.0 26 25762.5 27 34414.0 28 34414.0 29 34414.0 30 43841.0 31 53268.0 32 53268.0 33 53268.0 34 65727.5 35 78187.0 36 78187.0 37 78187.0 38 90340.0 39 102493.0 40 102493.0 41 102493.0 42 119897.5 43 137302.0 44 137302.0 45 137302.0 46 152743.5 47 168185.0 48 168185.0 49 168185.0 50 172807.0 51 177429.0 52 177429.0 53 177429.0 54 163039.0 55 148649.0 56 148649.0 57 148649.0 58 136760.0 59 124871.0 60 124871.0 61 124871.0 62 110375.5 63 95880.0 64 95880.0 65 95880.0 66 78786.5 67 61693.0 68 61693.0 69 61693.0 70 46228.0 71 30763.0 72 30763.0 73 30763.0 74 23551.5 75 16340.0 76 16340.0 77 16340.0 78 13223.0 79 10106.0 80 10106.0 81 10106.0 82 6859.0 83 3612.0 84 3612.0 85 3612.0 86 2769.0 87 1926.0 88 1926.0 89 1926.0 90 1360.5 91 795.0 92 795.0 93 795.0 94 551.5 95 308.0 96 308.0 97 308.0 98 488.0 99 668.0 100 668.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03677337451534879 2 0.005074881833328389 3 0.0018738025230750973 4 0.0035914548358939365 5 0.010227838771784906 6 0.013585068292294456 7 0.02295408090766994 8 0.03614877367432375 9 0.04786003944354311 10 0.05754135247943112 11 0.05644830100763731 12 0.06394351109993769 13 0.06277238452301576 14 0.06550501320250028 15 0.06160125794609382 16 0.06519271278198775 17 0.06370928578455332 18 0.07573285197428518 19 0.07268792287428814 20 0.07721627897171963 21 0.07393712455633822 22 0.076825903446079 23 0.08057350849222919 24 0.07424942497685073 25 0.07542055155377267 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1280818.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.477305968808466 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89971756947689 33.60760066915631 2 13.804944014268441 12.556233256383134 3 4.90545351059418 6.692604306511714 4 2.1886983697410187 3.981444217365784 5 1.1922026944802684 2.7109083356858523 6 0.7625050283830809 2.080600468711941 7 0.512136542889173 1.63034131811451 8 0.40047996263763197 1.4570199836198856 9 0.308697071251947 1.2634840044899875 >10 1.7803331984905542 14.813474386445238 >50 0.1269274777161886 4.027579171305158 >100 0.10516743014193433 9.924361223489594 >500 0.009466785757751204 2.9704584417302464 >1k 0.0032703441708595063 2.2838902169907085 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3730 0.2912201421279214 No Hit TATCAACGCAGAGTACTTTTTTTTT 2639 0.2060402024331326 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1877 0.14654697232549824 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1577 0.12312444078705952 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1520 0.11867415979475615 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1442 0.11258430159476208 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1376 0.10743134465630558 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1352 0.10555754213323047 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1339 0.1045425657665648 No Hit GGTATCAACGCAGAGTACTTTTTTT 1331 0.10391796492553979 No Hit GAATAACGCCGCCGCATCGCCAGTC 1327 0.10360566450502726 No Hit GAATAGGACCGCGGTTCTATTTTGT 1320 0.10305913876913035 No Hit GTATCTGATCGTCTTCGAACCTCCG 1311 0.10235646282297718 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAGAC 50 4.583864E-6 17.09104 3 CCGAACG 35 0.0021678929 16.28799 9 GCGAAAT 65 3.3674787E-6 14.616858 12 GCGTTAT 75 9.709074E-7 13.928207 1 CCTACGA 70 7.2936855E-6 13.565376 2 AAATCGC 85 2.6905946E-7 13.414688 14 GCTCGCG 50 0.0014981572 13.30134 13 TATGCCG 50 0.0015034588 13.295106 5 TAGGCCC 90 5.436923E-7 12.660028 4 ACGGTAT 245 0.0 12.409898 9 CGAAATT 85 3.937341E-6 12.295357 13 CGCGCTA 70 1.0879966E-4 12.217425 16 GTGTAGG 140 5.2750693E-11 12.209792 1 CGTTGTA 55 0.0030782053 12.085517 2 CGCGGTC 150 1.4551915E-11 12.035017 10 CGCGTAA 95 1.0375315E-6 12.001678 10 AAGACGG 320 0.0 11.870631 5 ACGCGCG 65 8.0149464E-4 11.693486 13 TAAGACA 65 8.0570794E-4 11.68618 4 AACCGCG 155 2.5465852E-11 11.645879 7 >>END_MODULE