##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064227_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1843250 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29377892309779 32.0 32.0 32.0 32.0 32.0 2 31.396901668249015 32.0 32.0 32.0 32.0 32.0 3 31.465586328495863 32.0 32.0 32.0 32.0 32.0 4 31.55086721822867 32.0 32.0 32.0 32.0 32.0 5 31.508005425200054 32.0 32.0 32.0 32.0 32.0 6 35.07464641258647 36.0 36.0 36.0 36.0 36.0 7 35.09290872100909 36.0 36.0 36.0 36.0 36.0 8 35.0447296894073 36.0 36.0 36.0 36.0 36.0 9 35.13884823002848 36.0 36.0 36.0 36.0 36.0 10 35.00452570188526 36.0 36.0 36.0 36.0 36.0 11 35.138324698223244 36.0 36.0 36.0 36.0 36.0 12 35.04600895158009 36.0 36.0 36.0 36.0 36.0 13 35.09276224060762 36.0 36.0 36.0 36.0 36.0 14 35.03514227587142 36.0 36.0 36.0 36.0 36.0 15 35.00823436864234 36.0 36.0 36.0 36.0 36.0 16 35.02061738776617 36.0 36.0 36.0 36.0 36.0 17 34.989327546453275 36.0 36.0 36.0 36.0 36.0 18 34.98378407703784 36.0 36.0 36.0 36.0 36.0 19 34.975587684795876 36.0 36.0 36.0 36.0 36.0 20 34.96986409873864 36.0 36.0 36.0 36.0 36.0 21 34.96826529228265 36.0 36.0 36.0 36.0 36.0 22 34.95145205479452 36.0 36.0 36.0 36.0 36.0 23 34.901395903973956 36.0 36.0 36.0 32.0 36.0 24 34.8685398074054 36.0 36.0 36.0 32.0 36.0 25 34.84312328767123 36.0 36.0 36.0 32.0 36.0 26 34.77977322663773 36.0 36.0 36.0 32.0 36.0 27 34.775970703919704 36.0 36.0 36.0 32.0 36.0 28 34.7596799131968 36.0 36.0 36.0 32.0 36.0 29 34.71526868303269 36.0 36.0 36.0 32.0 36.0 30 34.69786192865862 36.0 36.0 36.0 32.0 36.0 31 34.68877905872779 36.0 36.0 36.0 32.0 36.0 32 34.65819666350197 36.0 36.0 36.0 32.0 36.0 33 34.63244812152448 36.0 36.0 36.0 32.0 36.0 34 34.60861087752611 36.0 36.0 36.0 32.0 36.0 35 34.570631222026314 36.0 36.0 36.0 32.0 36.0 36 34.55043916994439 36.0 36.0 36.0 32.0 36.0 37 34.551063610470635 36.0 36.0 36.0 32.0 36.0 38 34.50445897192459 36.0 36.0 36.0 32.0 36.0 39 34.49077444730774 36.0 36.0 36.0 32.0 36.0 40 34.47306713685067 36.0 36.0 36.0 32.0 36.0 41 34.44978217821782 36.0 36.0 36.0 32.0 36.0 42 34.392165468601654 36.0 36.0 36.0 32.0 36.0 43 34.38183209005832 36.0 36.0 36.0 32.0 36.0 44 34.30439820968398 36.0 36.0 36.0 32.0 36.0 45 34.28067923504679 36.0 36.0 36.0 32.0 36.0 46 34.25568696595687 36.0 36.0 36.0 32.0 36.0 47 34.232383561643836 36.0 36.0 36.0 32.0 36.0 48 34.183466702834664 36.0 36.0 36.0 32.0 36.0 49 34.145545096975454 36.0 36.0 36.0 32.0 36.0 50 33.56191184049912 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 1.0 19 4.0 20 28.0 21 85.0 22 260.0 23 713.0 24 1873.0 25 4012.0 26 8191.0 27 14252.0 28 23008.0 29 34359.0 30 48164.0 31 67076.0 32 95289.0 33 150242.0 34 309022.0 35 1086668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.29050999524708 18.609162074705544 11.90026889829828 26.200059031749095 2 15.835953724862145 21.052648711288192 37.0105618596859 26.100835704163767 3 17.843451917870794 25.412072858582867 28.951000465484185 27.793474758062153 4 12.229974230299742 16.059080428590804 36.58255798182558 35.12838735928388 5 14.386599755865998 36.73587413535874 33.316424793164245 15.561101315611015 6 33.67485060314826 36.34899321576893 16.707545659963813 13.268610521119003 7 29.159256747592565 30.86629594466296 21.847063610470634 18.12738369727384 8 27.537827207378275 33.21524481215245 19.905818527058187 19.341109453411097 9 27.33668107250626 13.85472490199291 18.910024446163646 39.898569579337185 10 15.801786093082782 27.049745529748957 31.60243288859135 25.546035488576912 11 36.93698630136986 21.83746100637461 22.33261901532619 18.892933676929335 12 24.278475518784756 24.087345720873458 29.377729553777293 22.25644920656449 13 29.12574006951893 20.236008461192498 25.498158404851463 25.140093064437114 14 23.38499581716168 19.346739393439616 25.75559637726055 31.51266841213815 15 25.125056424590703 26.989075331168944 22.56186088300144 25.32400736123891 16 25.661541432906205 26.3552681619741 23.4997420293582 24.4834483757615 17 23.610850400108504 26.061847280618473 25.695483520954838 24.63181879831819 18 24.225643852323163 25.650037081423427 26.32835315620692 23.795965910046487 19 25.208517564085177 24.690356706903568 25.95225823952258 24.148867489488676 20 25.808969970795975 24.328044274236817 25.153547640864804 24.709438114102404 21 26.97132781771328 24.565468601654686 24.39115692391157 24.072046656720467 22 25.37640078817392 24.668411412897235 25.545341701170976 24.40984609775787 23 24.33246366574383 24.667527111331015 25.82549249064009 25.174516732285067 24 24.52995811722836 24.683709120895813 25.73175495323452 25.054577808641305 25 24.898044660155197 24.525325125908132 25.581526565896763 24.995103648039912 26 24.888546237102858 25.38004417459109 25.590500129941223 24.140909458364824 27 24.914886679243093 25.015639148817964 25.512402536770313 24.557071635168633 28 24.204572581870266 25.18424879012131 26.077985633368776 24.53319299463964 29 24.335242522343044 24.615463074635237 25.906213734767586 25.143080668254132 30 24.51693199802297 25.077760181253243 25.775743597840023 24.629564222883765 31 25.1680727209198 25.130961352633413 24.814809389176176 24.886156537270608 32 24.433152341393335 25.171063425305018 25.344405526113622 25.051378707188025 33 24.222305773793344 24.939492928770115 25.682125334952282 25.15607596248426 34 24.83432229068456 24.4626833848112 25.94961878528874 24.7533755392155 35 25.542332742873107 24.502779141653487 25.464533052661274 24.490355062812128 36 24.80169366092492 25.54147667960858 24.954696089431547 24.702133570034963 37 25.062406580021758 25.115630535684737 25.417449970295497 24.40451291399801 38 24.305258274804064 25.32777746128116 25.61050841112368 24.756455852791092 39 24.957369385929265 24.498103527693488 25.33107561528875 25.213451471088494 40 25.348103274571493 24.890421727829217 25.26363075580932 24.49784424178997 41 24.652505002191848 25.529461933428532 25.39420744013646 24.42382562424316 42 25.166395038205213 25.650931747109922 25.434081089233747 23.74859212545112 43 24.657488168808843 24.818510639798482 25.61277242392529 24.91122876746738 44 24.235576870910688 24.858562732609236 25.45583272750947 25.450027668970606 45 24.764529049961993 25.065903654526505 25.189111886203552 24.980455409307943 46 24.82134602989972 25.343907536126835 25.016981078846456 24.817765355126983 47 24.404879131205185 25.237888299514378 25.86359461305547 24.493637956224973 48 24.917345104128348 25.769067592010874 25.025526175587537 24.288061128273235 49 24.301624907839063 25.247946147089667 25.224346437230466 25.226082507840804 50 24.666468101866997 25.524745460000315 24.878541818235085 24.930244619897604 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 30.0 2 38.0 3 125.0 4 212.0 5 264.0 6 316.0 7 325.0 8 334.0 9 435.5 10 537.0 11 799.5 12 1062.0 13 1904.0 14 2746.0 15 3789.0 16 4832.0 17 5163.5 18 5495.0 19 5659.0 20 5823.0 21 6404.5 22 6986.0 23 8045.0 24 9104.0 25 10347.5 26 11591.0 27 14217.0 28 16843.0 29 20030.5 30 23218.0 31 26762.5 32 30307.0 33 35280.0 34 40253.0 35 47160.0 36 54067.0 37 63594.5 38 73122.0 39 80809.0 40 88496.0 41 95715.0 42 102934.0 43 105400.5 44 107867.0 45 115094.0 46 122321.0 47 127507.0 48 132693.0 49 137249.0 50 141805.0 51 139795.5 52 137786.0 53 135006.0 54 132226.0 55 131136.0 56 130046.0 57 124997.5 58 119949.0 59 109704.0 60 99459.0 61 86722.0 62 73985.0 63 63815.0 64 53645.0 65 45402.5 66 37160.0 67 31669.5 68 26179.0 69 22877.5 70 19576.0 71 15209.5 72 10843.0 73 9129.5 74 7416.0 75 5810.0 76 4204.0 77 3629.0 78 3054.0 79 2534.5 80 2015.0 81 1581.0 82 1147.0 83 983.5 84 820.0 85 579.0 86 338.0 87 249.0 88 160.0 89 119.0 90 78.0 91 66.5 92 55.0 93 43.5 94 32.0 95 30.5 96 29.0 97 21.5 98 14.0 99 12.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009439848094398481 2 7.595280075952801E-4 3 4.340160043401601E-4 4 0.0 5 0.0 6 2.712600027126E-4 7 0.0 8 0.0 9 8.680320086803202E-4 10 4.8826800488268E-4 11 0.0 12 0.0 13 5.967720059677201E-4 14 2.1700800217008004E-4 15 0.004448664044486641 16 9.2228400922284E-4 17 0.0 18 4.8826800488268E-4 19 0.0 20 5.967720059677201E-4 21 0.0 22 1.0850400108504002E-4 23 9.2228400922284E-4 24 5.425200054252E-4 25 0.0022243320222433203 26 0.0059134680591346805 27 0.00645598806455988 28 0.004882680048826801 29 0.00320086803200868 30 0.00450291604502916 31 0.00808354808083548 32 0.00401464804014648 33 0.004177404041774041 34 0.0034178760341787603 35 0.0029838600298386004 36 0.007703784077037841 37 0.0051539400515394004 38 0.0084090600840906 39 0.00493693204936932 40 0.0025498440254984405 41 0.0031466160314661605 42 0.00249559202495592 43 0.0015733080157330802 44 0.0016275600162756003 45 0.0015733080157330802 46 0.0011935440119354402 47 0.00287535602875356 48 0.0023870880238708804 49 3.7976400379764004E-4 50 0.00124779601247796 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1843250.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.9917105974062 #Duplication Level Percentage of deduplicated Percentage of total 1 78.67794125795929 45.626683998313005 2 12.986528720289344 15.062220304238473 3 3.734450121445342 6.497014520499202 4 1.5328732133690044 3.5557575908884558 5 0.8230607708807637 2.3865351014497644 6 0.48912224859444553 1.7019021532344993 7 0.31823335310657136 1.2918427561058925 8 0.2342909106356034 1.0869544548146135 9 0.16861451394116228 0.8800419685498377 >10 0.9081181293110564 9.377619460911873 >50 0.06604557063126276 2.6529262508480644 >100 0.05356718700189726 6.517356419916975 >500 0.005459633741972762 2.1721323751391166 >1k 0.0016943690923363743 1.1910126450902276 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0850400108504E-4 2 0.0 0.0 0.0 0.0 1.0850400108504E-4 3 0.0 0.0 0.0 0.0 1.0850400108504E-4 4 0.0 0.0 0.0 1.0850400108504E-4 1.0850400108504E-4 5 0.0 0.0 0.0 1.0850400108504E-4 1.6275600162756002E-4 6 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 7 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 8 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 9 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 10 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 11 0.0 0.0 0.0 1.0850400108504E-4 2.712600027126E-4 12 0.0 0.0 0.0 1.0850400108504E-4 7.052760070527601E-4 13 0.0 0.0 0.0 1.0850400108504E-4 7.052760070527601E-4 14 0.0 0.0 0.0 1.0850400108504E-4 7.595280075952801E-4 15 0.0 0.0 0.0 1.0850400108504E-4 9.765360097653601E-4 16 0.0 0.0 0.0 2.1700800217008E-4 0.0011392920113929201 17 0.0 0.0 0.0 2.712600027126E-4 0.0011392920113929201 18 0.0 0.0 0.0 2.712600027126E-4 0.00124779601247796 19 5.425200054252E-5 0.0 0.0 2.712600027126E-4 0.00124779601247796 20 5.425200054252E-5 0.0 0.0 4.8826800488268007E-4 0.001356300013563 21 5.425200054252E-5 0.0 0.0 7.595280075952801E-4 0.0014105520141055202 22 1.0850400108504E-4 0.0 0.0 9.2228400922284E-4 0.0014105520141055202 23 1.0850400108504E-4 0.0 0.0 0.001356300013563 0.00146480401464804 24 1.0850400108504E-4 0.0 0.0 0.0016818120168181202 0.00146480401464804 25 1.0850400108504E-4 0.0 0.0 0.0021700800217008 0.00146480401464804 26 1.0850400108504E-4 0.0 0.0 0.002712600027126 0.0015733080157330802 27 1.0850400108504E-4 0.0 0.0 0.0035263800352638005 0.0016275600162756001 28 1.0850400108504E-4 0.0 0.0 0.007649532076495321 0.0016275600162756001 29 1.0850400108504E-4 0.0 0.0 0.01415977214159772 0.0016275600162756001 30 1.0850400108504E-4 0.0 0.0 0.026420724264207242 0.0016275600162756001 31 1.0850400108504E-4 0.0 0.0 0.05674759256747593 0.0016275600162756001 32 1.0850400108504E-4 0.0 0.0 0.08739997287399973 0.0016275600162756001 33 1.0850400108504E-4 0.0 0.0 0.11978841719788418 0.0016275600162756001 34 1.0850400108504E-4 0.0 0.0 0.15575749355757493 0.0016818120168181202 35 1.0850400108504E-4 0.0 0.0 0.19503594195035942 0.0016818120168181202 36 1.0850400108504E-4 0.0 0.0 0.2529770785297708 0.0016818120168181202 37 1.0850400108504E-4 0.0 0.0 0.33668791536687914 0.0016818120168181202 38 1.0850400108504E-4 0.0 0.0 0.44649396446493966 0.00173606401736064 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3340 0.0 21.934563 1 TATACCG 75 0.0012919881 17.598436 5 GTATAAT 270 0.0 17.111448 1 AACGCAG 4365 0.0 16.681223 6 CCTTATA 230 1.8189894E-12 16.259867 2 GGTATCA 1715 0.0 16.163586 1 ATAATAC 205 1.05501385E-10 16.09657 3 GGCGTTA 440 0.0 15.999014 42 GTATTAT 255 0.0 15.529718 1 CCGTTAT 85 0.0029803426 15.529717 9 TTCGCGC 85 0.0029819596 15.528454 17 ATAGCGT 285 0.0 15.437226 6 AATAGCG 315 0.0 15.363716 5 GTATTAG 430 0.0 15.34914 1 CGGCGTT 460 0.0 15.303405 41 GTATTAA 260 1.8189894E-12 15.231071 1 CGCGCAA 335 0.0 15.105185 21 CGCAATA 530 0.0 14.94369 36 TATCAAC 4950 0.0 14.932412 2 CTAGCGG 525 0.0 14.668151 29 >>END_MODULE