##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064226_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1367434 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.316052548057165 32.0 32.0 32.0 32.0 32.0 2 31.389321897802745 32.0 32.0 32.0 32.0 32.0 3 31.46184093711287 32.0 32.0 32.0 32.0 32.0 4 31.545757235815405 32.0 32.0 32.0 32.0 32.0 5 31.491247840846434 32.0 32.0 32.0 32.0 32.0 6 35.075213136429255 36.0 36.0 36.0 36.0 36.0 7 35.08832601792847 36.0 36.0 36.0 36.0 36.0 8 35.03722300308461 36.0 36.0 36.0 36.0 36.0 9 35.143214955895495 36.0 36.0 36.0 36.0 36.0 10 34.999890305491896 36.0 36.0 36.0 36.0 36.0 11 35.14841008779948 36.0 36.0 36.0 36.0 36.0 12 35.044348758331296 36.0 36.0 36.0 36.0 36.0 13 35.09320596094583 36.0 36.0 36.0 36.0 36.0 14 35.03528799196159 36.0 36.0 36.0 36.0 36.0 15 35.007774415437964 36.0 36.0 36.0 36.0 36.0 16 35.022904213292925 36.0 36.0 36.0 36.0 36.0 17 34.98379373337214 36.0 36.0 36.0 36.0 36.0 18 34.983297182898774 36.0 36.0 36.0 36.0 36.0 19 34.98157863560508 36.0 36.0 36.0 36.0 36.0 20 34.97803623428992 36.0 36.0 36.0 36.0 36.0 21 34.966869333364535 36.0 36.0 36.0 36.0 36.0 22 34.95668456393508 36.0 36.0 36.0 36.0 36.0 23 34.90354269383385 36.0 36.0 36.0 32.0 36.0 24 34.871963838839754 36.0 36.0 36.0 32.0 36.0 25 34.8540777836444 36.0 36.0 36.0 32.0 36.0 26 34.78485762384145 36.0 36.0 36.0 32.0 36.0 27 34.77858821705472 36.0 36.0 36.0 32.0 36.0 28 34.76273882322657 36.0 36.0 36.0 32.0 36.0 29 34.734840584627854 36.0 36.0 36.0 32.0 36.0 30 34.71031435520837 36.0 36.0 36.0 32.0 36.0 31 34.7079120454808 36.0 36.0 36.0 32.0 36.0 32 34.668963913432016 36.0 36.0 36.0 32.0 36.0 33 34.642525343087854 36.0 36.0 36.0 32.0 36.0 34 34.63028051079613 36.0 36.0 36.0 32.0 36.0 35 34.595832778766656 36.0 36.0 36.0 32.0 36.0 36 34.56174630731721 36.0 36.0 36.0 32.0 36.0 37 34.55721592413235 36.0 36.0 36.0 32.0 36.0 38 34.5210467196223 36.0 36.0 36.0 32.0 36.0 39 34.52464543078496 36.0 36.0 36.0 32.0 36.0 40 34.49990346883286 36.0 36.0 36.0 32.0 36.0 41 34.48791605298683 36.0 36.0 36.0 32.0 36.0 42 34.42138560252268 36.0 36.0 36.0 32.0 36.0 43 34.41409238032695 36.0 36.0 36.0 32.0 36.0 44 34.35679235707171 36.0 36.0 36.0 32.0 36.0 45 34.33005395507205 36.0 36.0 36.0 32.0 36.0 46 34.30577709783434 36.0 36.0 36.0 32.0 36.0 47 34.272715173090624 36.0 36.0 36.0 32.0 36.0 48 34.24023316664643 36.0 36.0 36.0 32.0 36.0 49 34.22514139622095 36.0 36.0 36.0 32.0 36.0 50 33.62698236258569 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 13.0 21 46.0 22 139.0 23 403.0 24 1080.0 25 2566.0 26 5306.0 27 9522.0 28 15675.0 29 24605.0 30 35465.0 31 49900.0 32 71879.0 33 114828.0 34 238339.0 35 797665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.48682415803843 18.112165978089877 11.680280959809496 26.720728904062202 2 16.127541353092038 20.63548361855187 36.604772014090656 26.63220301426544 3 17.955095259128818 24.518731516394283 28.95779521846854 28.56837800600836 4 12.269696380227492 16.026001986201894 36.24942776031604 35.45487387325458 5 14.136696908223726 37.016192371990165 33.61185987769794 15.235250842088174 6 34.08025706598724 35.97110201538506 16.64712881308088 13.301512105546825 7 29.886217460014496 30.631994401188212 21.13544137080208 18.346346767995215 8 27.92456528066437 33.05746383372068 19.51392169567233 19.504049189942624 9 27.440442411087773 13.855183791911166 18.425336547180958 40.2790372498201 10 15.275836775945375 27.030153844353716 32.34000355413585 25.35400582556506 11 37.3882303557103 21.056680656383165 22.489950147466093 19.065138840440447 12 24.50306377881411 23.699731393732325 29.093064429670573 22.704140397782993 13 29.46638428697421 19.461455318240255 25.282026230304233 25.790134164481294 14 23.40862287850511 19.484332676140387 25.421446916555997 31.68559752879851 15 25.090959885502073 27.13913882288584 22.325121164052508 25.444780127559586 16 25.601694859477163 25.7579735401253 23.718598918115674 24.921732682281856 17 23.994284184830857 25.923664323104447 25.259281252331007 24.82277023973369 18 24.76664219249569 24.985885911360597 25.978259915695745 24.269211980447967 19 25.50872656376834 24.954696168151443 25.446566342507204 24.090010925573008 20 25.83282568744273 24.26169517406099 25.00886704406756 24.896612094428715 21 26.51703848229604 24.396277992210226 24.514309282934313 24.572374242559423 22 25.627819152981644 24.36728115182327 25.03093389653014 24.973965798664942 23 24.36437005959385 24.14848953103758 25.551201054830873 25.935939354537695 24 24.788544934658447 24.78635103807873 25.342869470466496 25.082234556796323 25 24.89052343983104 24.425046949867486 25.506502776038893 25.177926834262582 26 24.808134764210898 25.11200366251611 25.589783569285768 24.49007800398723 27 25.245146078394086 24.79441956254004 24.909459771762567 25.050974587303305 28 24.52255338319031 24.61799151368532 25.685655319889598 25.173799783234774 29 24.597373990601128 24.83848886717693 25.496965770024527 25.067171372197418 30 24.596658302794598 24.985209037077233 25.59820212097655 24.819930539151624 31 25.170604845462837 24.66963252034423 24.875945356717892 25.28381727747504 32 24.79186473401688 24.821702818528866 24.803054015708874 25.58337843174538 33 24.59875292716925 24.513771773678076 25.37389513530433 25.513580163848342 34 25.208791626687884 24.503214879127565 25.449322505909063 24.838670988275492 35 25.68630949856149 24.47063228671348 25.38683297912952 24.456225235595507 36 24.83282930414718 24.945093120458708 25.01969187787745 25.202385697516664 37 25.509275003016707 24.76632404187555 24.901106857249424 24.82329409785832 38 24.777558533956057 24.637138473195126 25.464519799959923 25.120783192888897 39 25.195447052680386 24.638907456460466 24.87124993966555 25.2943955511936 40 25.43209425117558 24.72404033903511 25.31859500808097 24.525270401708337 41 24.65381051596951 24.923010091510303 25.60789301053762 24.81528638198257 42 25.60366300473453 25.12077647977698 25.087647963071575 24.18791255241692 43 24.870888053250724 24.46303909996797 25.447741656172436 25.218331190608872 44 24.716435549146052 24.85457952017458 25.037040720659583 25.39194421001979 45 24.68632465443972 25.097830435046514 25.22595521336944 24.989889697144324 46 24.620947023630617 24.821104838963276 25.208037612410518 25.349910524995593 47 24.80675031921849 24.856406528584866 25.393629671449947 24.9432134807467 48 25.475865216132178 25.23577523540958 24.641144826254713 24.647214722203532 49 24.666381948060305 25.17858292039385 24.919045334612616 25.23598979693323 50 24.765286884586526 25.368688634166393 24.846608269331746 25.019416211915342 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 91.0 1 70.0 2 49.0 3 148.5 4 248.0 5 283.5 6 319.0 7 298.5 8 278.0 9 350.0 10 422.0 11 661.5 12 901.0 13 1466.5 14 2032.0 15 2597.0 16 3162.0 17 3341.5 18 3521.0 19 3536.0 20 3551.0 21 4054.5 22 4558.0 23 5424.0 24 6290.0 25 7624.5 26 8959.0 27 10928.0 28 12897.0 29 14922.5 30 16948.0 31 19077.0 32 21206.0 33 24568.5 34 27931.0 35 32220.5 36 36510.0 37 42676.5 38 48843.0 39 54376.5 40 59910.0 41 65399.5 42 70889.0 43 72744.0 44 74599.0 45 82080.5 46 89562.0 47 95458.0 48 101354.0 49 104632.0 50 107910.0 51 105773.5 52 103637.0 53 102760.0 54 101883.0 55 101153.5 56 100424.0 57 96378.0 58 92332.0 59 84341.0 60 76350.0 61 67046.5 62 57743.0 63 49931.5 64 42120.0 65 35363.0 66 28606.0 67 24381.0 68 20156.0 69 18266.5 70 16377.0 71 12657.5 72 8938.0 73 7588.5 74 6239.0 75 4769.0 76 3299.0 77 2872.5 78 2446.0 79 2061.0 80 1676.0 81 1339.5 82 1003.0 83 836.0 84 669.0 85 476.5 86 284.0 87 209.0 88 134.0 89 100.5 90 67.0 91 53.5 92 40.0 93 33.5 94 27.0 95 23.5 96 20.0 97 16.0 98 12.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008848690320702865 2 2.193890162157735E-4 3 4.38778032431547E-4 4 0.0 5 0.0 6 2.193890162157735E-4 7 7.312967207192449E-5 8 0.0 9 0.0013163340972946408 10 9.506857369350185E-4 11 7.312967207192449E-5 12 3.6564836035962245E-4 13 5.850373765753959E-4 14 1.4625934414384898E-4 15 0.005338466061250488 16 3.6564836035962245E-4 17 0.0 18 4.38778032431547E-4 19 0.0 20 8.044263927911694E-4 21 0.0 22 1.4625934414384898E-4 23 8.044263927911694E-4 24 2.9251868828769796E-4 25 0.0013163340972946408 26 0.004972817700890866 27 0.006289151798185507 28 0.0040952616360277715 29 0.0026326681945892817 30 0.0032908352432366025 31 0.006801059502688977 32 0.0039490022918839225 33 0.005265336389178563 34 0.003071446227020829 35 0.003510224259452376 36 0.008702430976559015 37 0.0035833539315243005 38 0.007898004583767845 39 0.0040952616360277715 40 0.001755112129726188 41 0.003437094587380451 42 0.0023401495063015837 43 0.0011700747531507918 44 0.0014625934414384898 45 0.0012432044252227166 46 9.506857369350185E-4 47 0.0023401495063015837 48 0.0021938901621577347 49 1.4625934414384898E-4 50 0.0014625934414384898 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1367434.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.94144438586066 #Duplication Level Percentage of deduplicated Percentage of total 1 81.10656138415757 48.61644438536876 2 11.576648876440156 13.878421096035481 3 3.147969841258243 5.660815775044428 4 1.3105266306899253 3.1421943659875806 5 0.6972823636493973 2.0898056010965913 6 0.4651305910213445 1.6728359672321054 7 0.3062637333375869 1.2850523377482719 8 0.22433267305166554 1.0757459556526299 9 0.17007167149181304 0.917490747450319 >10 0.8668128792477013 9.201866471183619 >50 0.06452429495738342 2.680330515730297 >100 0.057119084646876504 6.8332225611786255 >500 0.005896124553080058 2.365940887338027 >1k 8.598514973241751E-4 0.5798333329532558 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4625934414384898E-4 2 0.0 0.0 0.0 0.0 1.4625934414384898E-4 3 0.0 0.0 0.0 0.0 1.4625934414384898E-4 4 0.0 0.0 0.0 0.0 1.4625934414384898E-4 5 0.0 0.0 0.0 0.0 2.193890162157735E-4 6 0.0 0.0 0.0 0.0 3.6564836035962245E-4 7 0.0 0.0 0.0 0.0 3.6564836035962245E-4 8 0.0 0.0 0.0 0.0 3.6564836035962245E-4 9 0.0 0.0 0.0 0.0 3.6564836035962245E-4 10 0.0 0.0 0.0 0.0 3.6564836035962245E-4 11 0.0 0.0 0.0 0.0 3.6564836035962245E-4 12 0.0 0.0 0.0 0.0 6.581670486473204E-4 13 0.0 0.0 0.0 7.312967207192449E-5 6.581670486473204E-4 14 0.0 0.0 0.0 7.312967207192449E-5 6.581670486473204E-4 15 0.0 0.0 0.0 7.312967207192449E-5 8.044263927911694E-4 16 0.0 0.0 0.0 7.312967207192449E-5 8.044263927911694E-4 17 0.0 0.0 0.0 7.312967207192449E-5 8.77556064863094E-4 18 0.0 0.0 0.0 7.312967207192449E-5 8.77556064863094E-4 19 0.0 0.0 0.0 1.4625934414384898E-4 8.77556064863094E-4 20 0.0 0.0 0.0 2.193890162157735E-4 8.77556064863094E-4 21 0.0 0.0 0.0 2.9251868828769796E-4 8.77556064863094E-4 22 0.0 0.0 0.0 3.6564836035962245E-4 9.506857369350185E-4 23 0.0 0.0 0.0 8.77556064863094E-4 9.506857369350185E-4 24 0.0 0.0 0.0 0.0013894637693665653 9.506857369350185E-4 25 0.0 0.0 0.0 0.0013894637693665653 0.0010238154090069429 26 0.0 0.0 0.0 0.0021207604900858102 0.0010238154090069429 27 0.0 0.0 0.0 0.002705797866661206 0.0010238154090069429 28 0.0 0.0 0.0 0.004607169340531243 0.0010238154090069429 29 0.0 0.0 0.0 0.010530672778357127 0.0010238154090069429 30 0.0 0.0 0.0 0.023182106046800065 0.0010969450810788674 31 0.0 0.0 0.0 0.04782680553503862 0.0010969450810788674 32 0.0 0.0 0.0 0.07737119305209611 0.0010969450810788674 33 0.0 0.0 0.0 0.10011452106646464 0.0010969450810788674 34 0.0 0.0 0.0 0.13134089104117638 0.0011700747531507918 35 0.0 0.0 0.0 0.16505366986633357 0.0011700747531507918 36 0.0 0.0 0.0 0.21383116113830722 0.0011700747531507918 37 0.0 0.0 0.0 0.28081794075619004 0.0011700747531507918 38 0.0 0.0 0.0 0.376764070514555 0.0011700747531507918 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTAT 40 7.034998E-4 27.498402 8 GTATCAA 2025 0.0 22.378944 1 GTATCGT 75 5.4742202E-5 20.532888 10 TACGACT 55 0.0044854158 19.998837 4 CTACACG 130 3.590685E-8 18.614302 4 TCTATAC 130 3.5937774E-8 18.612942 3 TAATACT 265 0.0 18.26309 4 GTAAACG 340 0.0 18.121231 27 TAAACGC 370 0.0 17.246656 28 CGCGGGA 345 0.0 17.21765 44 TCGATCG 90 2.2160047E-4 17.11074 41 ATCGTTT 405 0.0 16.842838 29 GTATTAG 340 0.0 16.82255 1 AACGCAG 2640 0.0 16.665697 6 GGTCGGA 415 0.0 16.43338 38 CAACGGA 135 1.0863587E-6 16.295347 14 GTATAGG 150 1.8393075E-7 16.132395 1 TACCGTC 370 0.0 16.05312 7 CGTCGTA 360 0.0 15.888545 10 TTAACGG 125 9.4341085E-6 15.841396 35 >>END_MODULE