##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064225_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 866051 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24609405219785 32.0 32.0 32.0 32.0 32.0 2 31.35981945635996 32.0 32.0 32.0 32.0 32.0 3 31.447552164941786 32.0 32.0 32.0 32.0 32.0 4 31.544234692876056 32.0 32.0 32.0 32.0 32.0 5 31.478215486154973 32.0 32.0 32.0 32.0 32.0 6 35.06087401319322 36.0 36.0 36.0 36.0 36.0 7 35.09555326418421 36.0 36.0 36.0 36.0 36.0 8 35.034651538997124 36.0 36.0 36.0 36.0 36.0 9 35.16343379315999 36.0 36.0 36.0 36.0 36.0 10 34.99657295009185 36.0 36.0 36.0 36.0 36.0 11 35.15438236316337 36.0 36.0 36.0 36.0 36.0 12 35.04797754404764 36.0 36.0 36.0 36.0 36.0 13 35.09561908016964 36.0 36.0 36.0 36.0 36.0 14 35.038659386110055 36.0 36.0 36.0 36.0 36.0 15 35.00537959080932 36.0 36.0 36.0 36.0 36.0 16 35.01984871560682 36.0 36.0 36.0 36.0 36.0 17 34.979427308553426 36.0 36.0 36.0 36.0 36.0 18 34.9759817839827 36.0 36.0 36.0 36.0 36.0 19 34.97471742426254 36.0 36.0 36.0 36.0 36.0 20 34.963883189327184 36.0 36.0 36.0 36.0 36.0 21 34.958360419882894 36.0 36.0 36.0 36.0 36.0 22 34.93997120261971 36.0 36.0 36.0 36.0 36.0 23 34.88411767898195 36.0 36.0 36.0 32.0 36.0 24 34.84303118407576 36.0 36.0 36.0 32.0 36.0 25 34.82852164595388 36.0 36.0 36.0 32.0 36.0 26 34.760346677043266 36.0 36.0 36.0 32.0 36.0 27 34.76172996740377 36.0 36.0 36.0 32.0 36.0 28 34.72806451352172 36.0 36.0 36.0 32.0 36.0 29 34.685700957564855 36.0 36.0 36.0 32.0 36.0 30 34.68070818000326 36.0 36.0 36.0 32.0 36.0 31 34.66574716731463 36.0 36.0 36.0 32.0 36.0 32 34.621205910506426 36.0 36.0 36.0 32.0 36.0 33 34.58121634869078 36.0 36.0 36.0 32.0 36.0 34 34.563927528517375 36.0 36.0 36.0 32.0 36.0 35 34.50741122635965 36.0 36.0 36.0 32.0 36.0 36 34.47475148692167 36.0 36.0 36.0 32.0 36.0 37 34.452778185118426 36.0 36.0 36.0 32.0 36.0 38 34.405423006266375 36.0 36.0 36.0 32.0 36.0 39 34.396170664314226 36.0 36.0 36.0 32.0 36.0 40 34.3539883909839 36.0 36.0 36.0 32.0 36.0 41 34.3325912677198 36.0 36.0 36.0 32.0 36.0 42 34.229613498512215 36.0 36.0 36.0 32.0 36.0 43 34.22993680510732 36.0 36.0 36.0 32.0 36.0 44 34.16237496406101 36.0 36.0 36.0 32.0 36.0 45 34.09825056492054 36.0 36.0 36.0 32.0 36.0 46 34.07856119327845 36.0 36.0 36.0 32.0 36.0 47 34.03435478972947 36.0 36.0 36.0 32.0 36.0 48 33.97979795647139 36.0 36.0 36.0 32.0 36.0 49 33.95120148813407 36.0 36.0 36.0 32.0 36.0 50 33.32135289954056 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 1.0 19 6.0 20 10.0 21 25.0 22 106.0 23 262.0 24 759.0 25 1663.0 26 3431.0 27 6428.0 28 10647.0 29 16631.0 30 23652.0 31 33453.0 32 48656.0 33 78200.0 34 159753.0 35 482366.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.94254496829673 18.067688299871016 11.872531030636294 26.117235701195963 2 15.84494072465224 20.700126899010787 36.61273170038901 26.842200675947964 3 17.978333764410287 24.781767292344075 28.826462274608332 28.413436668637303 4 11.991210679278703 15.522757897629585 35.98448590210045 36.50154552099126 5 14.167756864203149 37.07125792822825 33.03870095410086 15.722284253467752 6 34.3868533997499 35.75917759849616 16.489367229798777 13.364601771955167 7 30.05334564978927 30.73852548929046 20.856763466312568 18.3513653946077 8 28.617483265997034 32.30687338274536 19.462941558868934 19.61270179238867 9 27.73572182411477 13.610540828273917 18.502682317947627 40.15105502966369 10 15.9117597815356 26.44331414649354 31.386937168391942 26.257988903578916 11 37.73611484773991 20.777413801265745 22.42315983700729 19.063311513987053 12 24.952254488770855 23.735350152993476 28.650655273944924 22.661740084290745 13 29.439626255849856 19.051160040967755 25.738556914347605 25.770656788834785 14 23.870270469997042 19.662189624593555 25.155072236180903 31.312467669228493 15 25.24110743137445 26.960845446441358 22.624491341841377 25.173555780342816 16 25.837828850133015 25.434271541531185 23.886089454626074 24.841810153709726 17 23.823077393825535 25.629091127427827 25.440303169212896 25.107528309533734 18 24.99826799438368 24.36204459798995 26.667921408513156 23.971765999113213 19 25.648604989775432 24.745193989730396 25.686824447982854 23.919376572511318 20 25.873135922498253 23.782136032192323 25.277208459144735 25.067519586164693 21 27.10429293424983 23.769962738914913 24.652358810277917 24.47338551655734 22 25.71927057413478 24.022141883099263 25.22980748246928 25.02878006029668 23 24.225272098710693 23.659482290779014 26.014553499467695 26.1006921110426 24 24.71964602423884 24.91374612030742 25.47214473100798 24.89446312444576 25 24.98328589491187 24.018544285161685 25.652427442308912 25.34574237761753 26 24.487670252137715 25.135133574674217 26.017240284297255 24.359955888890813 27 25.40496348746657 24.564205246165145 25.074018133865433 24.95681313250285 28 24.511037876810875 24.410578071125542 26.03144507388992 25.046938978173667 29 24.261140767478302 24.540230084142483 26.089481785294062 25.109147363085153 30 24.341585644673334 24.8936514168264 26.20332093947022 24.561441999030045 31 24.90857337513496 24.702567566787337 24.9933313702735 25.395527687804204 32 24.534018766266907 24.856181482687507 24.900637628143397 25.70916212290219 33 24.35445318183393 24.311497557764923 25.611482546390917 25.72256671401023 34 25.153459241502585 24.5673350053347 25.63635355900733 24.642852194155385 35 25.97216945891987 24.365175681589605 25.526802282145937 24.135852577344586 36 24.57017352414407 25.380230002921518 24.98934743974808 25.06024903318633 37 25.53116556199626 25.041915891087967 25.003233181681715 24.42368536523406 38 24.775750577367205 24.693071593533485 25.445150115473442 25.086027713625864 39 25.380135056489085 24.586724372061227 24.665822948517796 25.36731762293189 40 25.564614743318092 25.024566038476593 25.36866378071044 24.042155437494873 41 24.246696666008482 25.325772298298304 25.856476590005535 24.571054445687682 42 25.983014543292132 25.54007632485985 24.883636342642042 23.59327278920598 43 24.8900738537428 24.424735230406124 25.484275480465012 25.200915435386058 44 24.665229475278885 25.14649999249458 24.723540802340764 25.464729729885764 45 24.648197136618556 25.451971562481596 24.991484217223473 24.90834708367637 46 24.622939765046038 25.11021405428374 24.89579027345094 25.37105590721928 47 24.813776874037995 24.998874174250112 25.466986747587555 24.72036220412433 48 25.970689372472673 25.738943274744408 23.95506411988444 24.33530323289848 49 24.517663631797422 25.795888204423555 24.606227159096814 25.08022100468221 50 24.68826461625862 25.92608416018216 24.302369754710814 25.0832814688484 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29.0 1 28.0 2 27.0 3 116.5 4 206.0 5 233.0 6 260.0 7 250.5 8 241.0 9 339.0 10 437.0 11 638.5 12 840.0 13 1419.0 14 1998.0 15 2663.5 16 3329.0 17 3650.5 18 3972.0 19 3983.0 20 3994.0 21 4330.0 22 4666.0 23 5003.0 24 5340.0 25 5586.5 26 5833.0 27 6810.5 28 7788.0 29 9016.0 30 10244.0 31 11350.5 32 12457.0 33 14455.5 34 16454.0 35 19003.5 36 21553.0 37 26080.0 38 30607.0 39 33203.0 40 35799.0 41 39480.0 42 43161.0 43 44263.5 44 45366.0 45 50436.0 46 55506.0 47 59598.5 48 63691.0 49 65635.0 50 67579.0 51 64468.5 52 61358.0 53 61233.0 54 61108.0 55 61723.5 56 62339.0 57 61327.0 58 60315.0 59 55344.0 60 50373.0 61 43688.5 62 37004.0 63 32209.0 64 27414.0 65 23588.5 66 19763.0 67 17047.0 68 14331.0 69 13057.5 70 11784.0 71 9156.5 72 6529.0 73 5605.0 74 4681.0 75 3667.5 76 2654.0 77 2346.5 78 2039.0 79 1652.0 80 1265.0 81 1019.0 82 773.0 83 638.5 84 504.0 85 358.0 86 212.0 87 156.0 88 100.0 89 69.0 90 38.0 91 36.5 92 35.0 93 24.0 94 13.0 95 17.0 96 21.0 97 13.0 98 5.0 99 10.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006004265337722605 2 9.237331288804009E-4 3 3.463999233301503E-4 4 0.0 5 0.0 6 2.3093328222010021E-4 7 1.1546664111005011E-4 8 0.0 9 0.001039199769990451 10 6.927998466603006E-4 11 0.0 12 1.1546664111005011E-4 13 4.6186656444020043E-4 14 3.463999233301503E-4 15 0.005426932132172354 16 3.463999233301503E-4 17 0.0 18 3.463999233301503E-4 19 0.0 20 6.927998466603006E-4 21 0.0 22 0.0 23 5.773332055502505E-4 24 3.463999233301503E-4 25 0.0018474662577608017 26 0.006466131902162805 27 0.005426932132172354 28 0.0038103991566316533 29 0.002309332822201002 30 0.003579465874411553 31 0.006466131902162805 32 0.0033485325921914525 33 0.004734132285512054 34 0.0026557327455311525 35 0.0027711993866412024 36 0.007158931748823106 37 0.003579465874411553 38 0.005888798696612556 39 0.004965065567732154 40 0.002078399539980902 41 0.0036949325155216034 42 0.0018474662577608017 43 0.0017319996166507516 44 0.001154666411100501 45 0.0013855996933206012 46 0.001039199769990451 47 0.002309332822201002 48 0.0019629328988708516 49 6.927998466603006E-4 50 0.0013855996933206012 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 866051.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.888845470458236 #Duplication Level Percentage of deduplicated Percentage of total 1 77.227469034908 40.84471675861847 2 13.322824381878611 14.092575999264623 3 4.229431001043263 6.710691679264278 4 1.7706889008094302 3.7459876660466205 5 0.9314609624930745 2.4631947453530256 6 0.5558244326013808 1.7638147514735734 7 0.3498058514177297 1.2950579334206065 8 0.2556636326235659 1.0817403486595025 9 0.17928919387924214 0.8534158622642037 >10 0.9782894857903051 9.470390638259891 >50 0.09282486142516244 3.4674372613812046 >100 0.09655347402260231 10.312085909992371 >500 0.008558148826646527 3.1446221537897987 >1k 0.0013166382810225427 0.7542682922118435 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1187 0.13705890299762946 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1147 0.13244023735322746 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1083 0.12505037232218427 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1046 0.1207781066011124 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1032 0.1191615736255717 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1004 0.11592850767449031 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 997 0.11512024118671994 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 967 0.11165624195341844 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 922 0.10646024310346619 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 907 0.10472824348681543 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 890 0.1027653105879446 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 888 0.1025343773057245 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.1546664111005011E-4 0.0 8 0.0 0.0 0.0 1.1546664111005011E-4 0.0 9 0.0 0.0 0.0 1.1546664111005011E-4 0.0 10 0.0 0.0 0.0 1.1546664111005011E-4 0.0 11 0.0 0.0 0.0 1.1546664111005011E-4 0.0 12 0.0 0.0 0.0 2.3093328222010021E-4 2.3093328222010021E-4 13 0.0 0.0 0.0 2.3093328222010021E-4 2.3093328222010021E-4 14 0.0 0.0 0.0 2.3093328222010021E-4 2.3093328222010021E-4 15 0.0 0.0 0.0 2.3093328222010021E-4 3.463999233301503E-4 16 0.0 0.0 0.0 3.463999233301503E-4 4.6186656444020043E-4 17 0.0 0.0 0.0 3.463999233301503E-4 4.6186656444020043E-4 18 0.0 0.0 0.0 4.6186656444020043E-4 4.6186656444020043E-4 19 0.0 0.0 0.0 5.773332055502505E-4 4.6186656444020043E-4 20 0.0 0.0 0.0 5.773332055502505E-4 4.6186656444020043E-4 21 0.0 0.0 0.0 6.927998466603006E-4 4.6186656444020043E-4 22 0.0 0.0 0.0 9.237331288804009E-4 4.6186656444020043E-4 23 0.0 0.0 0.0 0.0013855996933206012 4.6186656444020043E-4 24 0.0 0.0 0.0 0.0030021326688613025 4.6186656444020043E-4 25 0.0 0.0 0.0 0.004156799079961804 4.6186656444020043E-4 26 0.0 0.0 0.0 0.005080532208842204 4.6186656444020043E-4 27 0.0 0.0 0.0 0.006235198619942706 4.6186656444020043E-4 28 0.0 0.0 0.0 0.010853864264344709 4.6186656444020043E-4 29 0.0 0.0 0.0 0.020553062117588918 4.6186656444020043E-4 30 0.0 0.0 0.0 0.03648745859077583 4.6186656444020043E-4 31 0.0 0.0 0.0 0.06373758589274765 4.6186656444020043E-4 32 0.0 0.0 0.0 0.08960211350139888 4.6186656444020043E-4 33 0.0 0.0 0.0 0.1168522408033707 4.6186656444020043E-4 34 0.0 0.0 0.0 0.1481437005441943 4.6186656444020043E-4 35 0.0 0.0 0.0 0.18844155829160175 4.6186656444020043E-4 36 0.0 0.0 0.0 0.23797674732781327 4.6186656444020043E-4 37 0.0 0.0 0.0 0.3125681974849056 4.6186656444020043E-4 38 0.0 0.0 0.0 0.40482604373183567 4.6186656444020043E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 30 1.3014837E-4 36.663536 5 GTAATAC 50 8.343586E-5 26.397749 3 GTCCTAG 105 3.0686351E-9 23.046984 1 GTCTTAC 70 3.2146803E-5 21.999392 1 ATATCCG 50 0.00258113 21.998125 5 ATATAGG 65 4.933447E-4 20.30596 3 TATAAGC 65 4.933447E-4 20.30596 3 ATAGCGC 55 0.0044848155 19.998295 8 CTACACG 55 0.0044848155 19.998295 4 ATCGTTT 260 0.0 19.462126 29 GACTTAT 70 8.12229E-4 18.856623 1 ACGGGAT 95 1.5966367E-5 18.525805 43 GTATAGT 60 0.0074116276 18.332829 1 GTATAGA 85 1.4305413E-4 18.117147 1 CTAAGAC 110 2.7968435E-6 17.998466 3 CTATACA 125 4.852882E-7 17.5985 4 TTAGACC 100 2.4835146E-5 17.5985 4 CGTGCGG 75 0.0012912076 17.598497 10 TACACGG 75 0.0012912076 17.598497 5 CGTTTAT 265 0.0 17.435495 31 >>END_MODULE