##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064222_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 669421 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243983980185863 32.0 32.0 32.0 32.0 32.0 2 31.338047357343136 32.0 32.0 32.0 32.0 32.0 3 31.426476014346726 32.0 32.0 32.0 32.0 32.0 4 31.52068728050061 32.0 32.0 32.0 32.0 32.0 5 31.46424746161235 32.0 32.0 32.0 32.0 32.0 6 35.014697776137886 36.0 36.0 36.0 36.0 36.0 7 35.040521585071275 36.0 36.0 36.0 36.0 36.0 8 34.9864823481785 36.0 36.0 36.0 36.0 36.0 9 35.09756789822847 36.0 36.0 36.0 36.0 36.0 10 34.95852535250612 36.0 36.0 36.0 36.0 36.0 11 35.09815198507367 36.0 36.0 36.0 36.0 36.0 12 34.99632368868022 36.0 36.0 36.0 36.0 36.0 13 35.045908329735695 36.0 36.0 36.0 36.0 36.0 14 34.98346630894459 36.0 36.0 36.0 36.0 36.0 15 34.96442896174455 36.0 36.0 36.0 36.0 36.0 16 34.959668131116295 36.0 36.0 36.0 36.0 36.0 17 34.932919642497026 36.0 36.0 36.0 32.0 36.0 18 34.92877576293543 36.0 36.0 36.0 32.0 36.0 19 34.92526377272299 36.0 36.0 36.0 32.0 36.0 20 34.91732108792524 36.0 36.0 36.0 32.0 36.0 21 34.91510872828908 36.0 36.0 36.0 32.0 36.0 22 34.899552000908244 36.0 36.0 36.0 32.0 36.0 23 34.85233059614204 36.0 36.0 36.0 32.0 36.0 24 34.81449192660523 36.0 36.0 36.0 32.0 36.0 25 34.78401633650573 36.0 36.0 36.0 32.0 36.0 26 34.725528479088645 36.0 36.0 36.0 32.0 36.0 27 34.72006256152705 36.0 36.0 36.0 32.0 36.0 28 34.688728020184605 36.0 36.0 36.0 32.0 36.0 29 34.66334489058455 36.0 36.0 36.0 32.0 36.0 30 34.636760723072626 36.0 36.0 36.0 32.0 36.0 31 34.63178478117657 36.0 36.0 36.0 32.0 36.0 32 34.57900036001261 36.0 36.0 36.0 32.0 36.0 33 34.55384578613459 36.0 36.0 36.0 32.0 36.0 34 34.52215123218423 36.0 36.0 36.0 32.0 36.0 35 34.472869838263215 36.0 36.0 36.0 32.0 36.0 36 34.447851202755814 36.0 36.0 36.0 32.0 36.0 37 34.44099453109478 36.0 36.0 36.0 32.0 36.0 38 34.39100655641219 36.0 36.0 36.0 32.0 36.0 39 34.37832694223815 36.0 36.0 36.0 32.0 36.0 40 34.34520727613863 36.0 36.0 36.0 32.0 36.0 41 34.325833817582655 36.0 36.0 36.0 32.0 36.0 42 34.25448260511696 36.0 36.0 36.0 32.0 36.0 43 34.247973995437846 36.0 36.0 36.0 32.0 36.0 44 34.17038605003428 36.0 36.0 36.0 32.0 36.0 45 34.133476541668095 36.0 36.0 36.0 32.0 36.0 46 34.08541709925443 36.0 36.0 36.0 32.0 36.0 47 34.04477302026677 36.0 36.0 36.0 32.0 36.0 48 33.991458290074554 36.0 36.0 36.0 32.0 36.0 49 33.95395871955018 36.0 36.0 36.0 32.0 36.0 50 33.34365518858835 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 0.0 19 6.0 20 7.0 21 29.0 22 85.0 23 257.0 24 596.0 25 1425.0 26 2889.0 27 5212.0 28 8703.0 29 13320.0 30 19085.0 31 26862.0 32 38248.0 33 59883.0 34 120563.0 35 372249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.058850596692935 18.849760067886148 12.150484943736965 25.940904391683944 2 15.454997677097074 21.4794576208395 37.583523671949344 25.482021030114083 3 17.93913826766196 25.572922190735547 29.27897176506792 27.208967776534575 4 11.857560488840356 16.6257108755178 36.894121935224625 34.62260670041722 5 13.640295120708792 37.85017201432282 33.47728858222255 15.032244282745836 6 32.75815966335087 36.958655315563746 17.212038463089748 13.071146557995641 7 28.93336181565861 31.29316229995772 21.601354005924524 18.172121878459148 8 27.46552617859314 33.42844039849363 19.982492332926512 19.12354108998672 9 27.45796335910704 14.110209496038337 19.087981165672765 39.34384597918185 10 15.524888371683081 27.48797820166744 32.13610811925146 24.851025307398018 11 36.72427366335983 21.59702190400361 23.049620492933446 18.62908393970312 12 24.46771164932083 24.412440004122963 29.467405414529868 21.652442932026332 13 29.104877826526664 20.015625536847732 25.878189529097707 25.001307107527893 14 23.128942772933627 20.350272847729606 26.184717838251263 30.336066541085504 15 24.47426250349197 28.032710231508247 23.16994650377282 24.32308076122696 16 24.6820353323952 26.313014069021563 24.911937903898036 24.093012694685203 17 22.950430297227005 26.432543944692505 26.17381289203655 24.44321286604394 18 23.89075286293467 25.344851796635286 27.481483915879167 23.28291142455088 19 24.871493424914963 25.129925711921196 26.58805146537082 23.410529397793017 20 25.34100568106278 24.67236416165111 25.98604457311362 24.000585584172494 21 26.44807975847785 24.55211294536622 25.45244323079198 23.547364065363947 22 25.188633162090824 24.91615888954783 26.118840012488402 23.77636793587294 23 23.76896245229043 24.806883622267204 26.45727986376164 24.96687406168072 24 24.087867108840488 25.505213468375608 26.477248961787815 23.929670460996086 25 24.16832859031528 24.97441757979101 26.644856252941047 24.212397576952664 26 23.69464052287582 26.03264239028945 26.891951447245567 23.380765639589168 27 24.372622778894907 25.316639128499162 26.084221974561306 24.22651611804462 28 23.463935021340358 25.436629523341438 26.910959098521186 24.188476356797022 29 23.663543974389043 25.31561799280252 26.728971124931096 24.291866907877342 30 23.389758092105165 25.70336740928641 26.977368846422173 23.929505652186254 31 24.285812460223315 25.388803069191262 25.8909229983178 24.43446147226762 32 23.944038602309565 25.759870927262135 25.71102048133375 24.58506998909455 33 23.683408527293913 25.214526875616244 26.35931757745974 24.742747019630105 34 24.32439699911264 25.198460715683552 26.704431716666516 23.772710568537292 35 24.956415868059963 25.241897534340712 26.455680129071773 23.34600646852755 36 23.59729835113368 25.98028889894811 26.155528564961926 24.26688418495628 37 24.673729877021263 25.869157314784935 25.670168393627574 23.78694441456623 38 23.60424292223799 25.700754463285275 26.389183536266525 24.305819078210202 39 24.33505632077445 25.547222803191012 25.777435836146882 24.340285039887657 40 24.674222698271137 25.599978488166254 26.405477151892963 23.320321661669645 41 23.581478172795094 25.91269118038106 26.728653080248705 23.77717756657514 42 24.845944359210698 26.287232914202395 25.92840464833486 22.93841807825205 43 24.025371633784427 25.357890318176185 26.320231726791842 24.29650632124755 44 23.599315810309154 26.048953921766344 25.84922431114198 24.502505956782517 45 23.823103663081913 26.325310833884814 25.79110827610624 24.060477226927034 46 23.67950882120076 25.794356224137672 25.88488370355985 24.641251251101718 47 23.972668224271143 25.613979002216897 26.28278289343954 24.13056988007242 48 24.58941210565785 26.17678957165009 25.269866120112454 23.9639322025796 49 23.64759185978247 26.46242924813681 25.436611260245854 24.453367631834865 50 23.958225962824034 26.56589150760893 25.296566683248408 24.17931584631863 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 204.0 1 123.5 2 43.0 3 140.5 4 238.0 5 245.5 6 253.0 7 238.5 8 224.0 9 308.5 10 393.0 11 567.0 12 741.0 13 1299.0 14 1857.0 15 2412.0 16 2967.0 17 3093.0 18 3219.0 19 3211.5 20 3204.0 21 3532.5 22 3861.0 23 4306.0 24 4751.0 25 5363.5 26 5976.0 27 7236.5 28 8497.0 29 9860.5 30 11224.0 31 12630.0 32 14036.0 33 16004.5 34 17973.0 35 20458.0 36 22943.0 37 25940.5 38 28938.0 39 30690.0 40 32442.0 41 34690.0 42 36938.0 43 36847.5 44 36757.0 45 40130.5 46 43504.0 47 45587.5 48 47671.0 49 49007.5 50 50344.0 51 48270.5 52 46197.0 53 45240.0 54 44283.0 55 44416.5 56 44550.0 57 42826.0 58 41102.0 59 36947.0 60 32792.0 61 28513.5 62 24235.0 63 20941.0 64 17647.0 65 14840.5 66 12034.0 67 10385.5 68 8737.0 69 8038.0 70 7339.0 71 5648.0 72 3957.0 73 3391.0 74 2825.0 75 2153.5 76 1482.0 77 1305.0 78 1128.0 79 953.0 80 778.0 81 623.0 82 468.0 83 414.5 84 361.0 85 258.5 86 156.0 87 107.0 88 58.0 89 46.0 90 34.0 91 25.5 92 17.0 93 14.0 94 11.0 95 13.0 96 15.0 97 12.5 98 10.0 99 8.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009709883615841153 2 0.0 3 2.987656497181893E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 7.469141242954733E-4 10 0.001792593898309136 11 0.0 12 0.0 13 5.975312994363786E-4 14 0.0 15 0.00418271909605465 16 0.0010456797740136625 17 0.0 18 4.48148474577284E-4 19 0.0 20 5.975312994363786E-4 21 0.0 22 0.0 23 8.96296949154568E-4 24 1.4938282485909464E-4 25 0.0023901251977455143 26 0.0068716099435183545 27 0.007020992768377449 28 0.004780250395491029 29 0.0029876564971818933 30 0.005079016045209218 31 0.008813586666686584 32 0.0046308675706319335 33 0.006124695819222881 34 0.0028382736723227982 35 0.0038839534463364607 36 0.0077679068926729215 37 0.005527164519786502 38 0.01060618056499572 39 0.006124695819222881 40 0.003286422146900082 41 0.004033336271195556 42 0.0029876564971818933 43 0.001792593898309136 44 0.0023901251977455143 45 0.001792593898309136 46 0.001643211073450041 47 0.002539508022604609 48 0.0022407423728864197 49 5.975312994363786E-4 50 0.0014938282485909467 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 669421.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.93338598895678 #Duplication Level Percentage of deduplicated Percentage of total 1 82.95670200045488 53.037028493659456 2 11.459358017340334 14.652711186165321 3 2.7737741387593378 5.320103179784608 4 0.9930670666579902 2.5396056034226544 5 0.46078504352716687 1.4729774022880304 6 0.284575332856761 1.0916318759080295 7 0.18341544897628292 0.8208459487016954 8 0.12410518094964429 0.6347571549506348 9 0.087820245838441 0.5053181107350712 >10 0.528019344849947 6.6620770678094186 >50 0.07830428636696823 3.5344458147471336 >100 0.06631153672851475 8.195806057566994 >500 0.0037623566937326474 1.5326921042609454 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 785 0.1172655175143893 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 744 0.11114082169516643 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 740 0.11054329039573005 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 704 0.10516550870080263 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 671 0.10023587548045251 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 1.4938282485909464E-4 0.0 21 0.0 0.0 0.0 4.4814847457728393E-4 0.0 22 0.0 0.0 0.0 7.469141242954732E-4 0.0 23 0.0 0.0 0.0 0.0011950625988727571 0.0 24 0.0 0.0 0.0 0.0019419767231682304 0.0 25 0.0 0.0 0.0 0.0028382736723227982 0.0 26 0.0 0.0 0.0 0.0038839534463364607 0.0 27 0.0 0.0 0.0 0.005079016045209218 0.0 28 0.0 0.0 0.0 0.008216055367250206 0.0 29 0.0 0.0 0.0 0.016581493559359506 0.0 30 0.0 0.0 0.0 0.03151977604526897 0.0 31 0.0 0.0 0.0 0.06363708338997433 0.0 32 0.0 0.0 0.0 0.09665068768383424 0.0 33 0.0 0.0 0.0 0.13041120610198964 0.0 34 0.0 0.0 0.0 0.1677569123167633 0.0 35 0.0 0.0 0.0 0.21122731435075984 0.0 36 0.0 0.0 0.0 0.27381871796672047 0.0 37 0.0 0.0 0.0 0.3628508815827409 0.0 38 0.0 0.0 0.0 0.48713739186550764 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGTGCG 30 0.0057447297 29.33174 5 GGACGTG 195 0.0 25.947308 6 TAGGACG 220 0.0 23.9987 4 AGGACGT 220 0.0 22.998753 5 GACGTGA 145 1.2732926E-11 21.240227 7 TTAGGAC 160 1.8189894E-12 20.623878 3 GTATCAA 2010 0.0 19.15462 1 AATCGCT 105 1.789902E-6 18.857527 15 ATTATAC 105 1.7911825E-6 18.85612 3 GATTTCG 95 1.595095E-5 18.526693 41 GTCATAA 60 0.0074078618 18.333708 1 GCACCGT 85 1.43022E-4 18.116663 6 CGTGAAA 150 9.571522E-9 17.600359 9 CGGTCCA 240 0.0 17.417023 10 GTAAACG 165 1.6552804E-9 17.332392 27 CGCAATA 255 0.0 17.256542 36 CAAATCG 115 4.266305E-6 17.217743 13 AACGCAG 2250 0.0 17.01241 6 GTATTAG 195 4.9112714E-11 16.923422 1 AATATGG 405 0.0 16.839848 14 >>END_MODULE