##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064221_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 558028 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11812668898335 32.0 32.0 32.0 32.0 32.0 2 31.28719347416259 32.0 32.0 32.0 32.0 32.0 3 31.401986997068246 32.0 32.0 32.0 32.0 32.0 4 31.501017870071035 32.0 32.0 32.0 32.0 32.0 5 31.40820173898084 32.0 32.0 32.0 32.0 32.0 6 34.998503659314586 36.0 36.0 36.0 36.0 36.0 7 35.04317704487947 36.0 36.0 36.0 36.0 36.0 8 34.97068785078885 36.0 36.0 36.0 36.0 36.0 9 35.115101751166605 36.0 36.0 36.0 36.0 36.0 10 34.95012795056879 36.0 36.0 36.0 36.0 36.0 11 35.10558430759747 36.0 36.0 36.0 36.0 36.0 12 35.01336671278144 36.0 36.0 36.0 36.0 36.0 13 35.05148666375164 36.0 36.0 36.0 36.0 36.0 14 34.990633086511785 36.0 36.0 36.0 36.0 36.0 15 34.94770692510053 36.0 36.0 36.0 36.0 36.0 16 34.97739181546446 36.0 36.0 36.0 36.0 36.0 17 34.945167625997264 36.0 36.0 36.0 36.0 36.0 18 34.943803895145045 36.0 36.0 36.0 36.0 36.0 19 34.92274760406288 36.0 36.0 36.0 36.0 36.0 20 34.89973262990387 36.0 36.0 36.0 32.0 36.0 21 34.886849763811135 36.0 36.0 36.0 32.0 36.0 22 34.87409771552682 36.0 36.0 36.0 32.0 36.0 23 34.83384704710158 36.0 36.0 36.0 32.0 36.0 24 34.81507917165447 36.0 36.0 36.0 32.0 36.0 25 34.784313690352455 36.0 36.0 36.0 32.0 36.0 26 34.713792139462534 36.0 36.0 36.0 32.0 36.0 27 34.68962130932498 36.0 36.0 36.0 32.0 36.0 28 34.65151390252819 36.0 36.0 36.0 32.0 36.0 29 34.616544331108834 36.0 36.0 36.0 32.0 36.0 30 34.56598952023913 36.0 36.0 36.0 32.0 36.0 31 34.55714946203416 36.0 36.0 36.0 32.0 36.0 32 34.50236905674984 36.0 36.0 36.0 32.0 36.0 33 34.46277247736673 36.0 36.0 36.0 32.0 36.0 34 34.4270789279391 36.0 36.0 36.0 32.0 36.0 35 34.367203796225276 36.0 36.0 36.0 32.0 36.0 36 34.303914857318986 36.0 36.0 36.0 32.0 36.0 37 34.249661307317915 36.0 36.0 36.0 32.0 36.0 38 34.18758377715814 36.0 36.0 36.0 32.0 36.0 39 34.09560093758736 36.0 36.0 36.0 32.0 36.0 40 34.0815532553922 36.0 36.0 36.0 32.0 36.0 41 34.05185402883009 36.0 36.0 36.0 32.0 36.0 42 33.97196556445196 36.0 36.0 36.0 32.0 36.0 43 33.95050427577111 36.0 36.0 36.0 32.0 36.0 44 33.83639351430394 36.0 36.0 36.0 32.0 36.0 45 33.75115227192901 36.0 36.0 36.0 27.0 36.0 46 33.69184521206821 36.0 36.0 36.0 27.0 36.0 47 33.630108166615294 36.0 36.0 36.0 27.0 36.0 48 33.54409456156322 36.0 36.0 36.0 21.0 36.0 49 33.49361680775875 36.0 36.0 36.0 21.0 36.0 50 32.874818109485545 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 6.0 21 19.0 22 50.0 23 187.0 24 523.0 25 1217.0 26 2514.0 27 4825.0 28 7940.0 29 12353.0 30 17318.0 31 24558.0 32 35364.0 33 55778.0 34 109060.0 35 286314.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.73031120350541 19.06146112420362 12.75549064059714 25.452737031693832 2 13.873367907588536 21.35921982129865 40.53072795891231 24.236684312200506 3 18.756899344831048 26.289191862715583 29.15537682967041 25.79853196278296 4 11.63651286315382 16.74432107349452 37.19204054276846 34.427125520583196 5 12.537901323947903 38.829234375336 34.05581798762786 14.577046313088232 6 32.16749757179773 36.58825932841839 17.73268629060295 13.511556809180933 7 27.90612657429376 31.57529729690983 21.789587619259247 18.728988509537157 8 26.302264402503102 36.241550603195535 19.930720322277732 17.525464672023627 9 27.216945629188917 14.360596394394465 19.484606286513028 38.93785168990359 10 15.564591423650997 28.341663336457458 33.117810556195714 22.975934683695833 11 35.41901123241128 21.186929688116006 24.68926290437039 18.704796175102327 12 25.342097529156245 23.812962790397616 31.18356068154286 19.66137899890328 13 30.503526730033116 21.074720800539044 25.92899230140639 22.492760168021448 14 22.098174285161317 21.53744973370512 26.89434938748593 29.47002659364763 15 23.004908540573865 31.149071606628592 23.740741603599954 22.10527824919759 16 22.131843791664874 26.669103837827763 28.64733416483879 22.55171820566857 17 21.491215494562997 27.848602579082055 28.09930684481782 22.560875081537127 18 22.055742822479914 25.522958566520977 31.553849544914492 20.867449066084617 19 24.536582393715012 25.221494261936677 27.631050771645864 22.610872572702444 20 24.778010942201306 25.81416895002536 28.395424561353206 21.01239554642013 21 24.40056771344807 25.094439705534487 26.628950518611973 23.87604206240547 22 24.198649886116623 27.109082535432872 27.069657919778074 21.622609658672427 23 21.855293221629854 27.185878768872364 28.361632543344832 22.59719546615295 24 23.858787688723623 26.100085121634336 28.52184041933605 21.51928677030599 25 23.143477193428897 26.59837747460212 28.37394425637837 21.884201075590617 26 21.14676391788604 27.680755548785406 29.36927088466949 21.80320964865906 27 22.290283731666406 27.294477340176922 28.35793344707451 22.057305481082164 28 21.42503844044688 27.626226241294898 27.890918735640835 23.05781658261739 29 22.288230360637407 26.18366630108313 27.823236776270043 23.704866562009418 30 21.67547186041677 26.917907398513275 28.549616131784 22.857004609285955 31 23.184109739290328 26.024907836702948 27.786808416834386 23.004174007172338 32 21.794809761132885 27.82374477831003 27.827687367049634 22.553758093507454 33 21.28144976729099 27.628662008304765 29.069181871457168 22.02070635294708 34 22.26628722576853 27.570813635500187 28.86432956879218 21.298569569939104 35 22.205775092873516 27.862950411905015 28.428345372990428 21.502929122231045 36 21.381475779728056 27.764286725581243 28.794604853552887 22.059632641137814 37 22.110494227619256 27.650976161375766 27.068182551317022 23.170347059687955 38 22.314738315462353 28.592371424833463 26.941598369836967 22.151291889867217 39 23.342927086282845 26.48055024892384 27.642553252497304 22.533969412296013 40 24.190204135760766 26.85610140301894 27.76898663288 21.1847078283403 41 22.929943154529358 26.436011211389165 28.967892703278114 21.666152930803364 42 23.081982254830102 28.663592653191422 27.586194537383673 20.668230554594803 43 21.378982832156552 28.197914053259737 28.312067667825524 22.11103544675818 44 21.178555684184495 28.387948862231237 27.53654873822179 22.896946715362475 45 21.502173765003995 28.72452143120831 27.176005075105103 22.59729972868259 46 21.76781877384543 26.776770049872674 27.669388786443523 23.786022389838376 47 23.562048400045875 26.84224108269297 27.178432159651333 22.417278357609817 48 21.93047536100986 28.09855596056041 26.444666659498438 23.52630201893129 49 22.76224183504323 27.43712199274226 26.96259128175261 22.838044890461898 50 21.74233273956941 29.500091394246102 25.803642150309486 22.953933715875003 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 52.0 1 44.5 2 37.0 3 137.0 4 237.0 5 290.0 6 343.0 7 334.0 8 325.0 9 401.5 10 478.0 11 711.0 12 944.0 13 1624.5 14 2305.0 15 3070.0 16 3835.0 17 4074.0 18 4313.0 19 4349.5 20 4386.0 21 4662.0 22 4938.0 23 5181.0 24 5424.0 25 5563.5 26 5703.0 27 7375.5 28 9048.0 29 11072.0 30 13096.0 31 15862.0 32 18628.0 33 23036.5 34 27445.0 35 31489.5 36 35534.0 37 35596.5 38 35659.0 39 33697.0 40 31735.0 41 30624.5 42 29514.0 43 28992.0 44 28470.0 45 30326.0 46 32182.0 47 34049.5 48 35917.0 49 35588.0 50 35259.0 51 33396.5 52 31534.0 53 30642.5 54 29751.0 55 29344.5 56 28938.0 57 27496.5 58 26055.0 59 23835.0 60 21615.0 61 19194.5 62 16774.0 63 14448.5 64 12123.0 65 10112.5 66 8102.0 67 6948.5 68 5795.0 69 5077.0 70 4359.0 71 3445.0 72 2531.0 73 2118.5 74 1706.0 75 1383.0 76 1060.0 77 905.5 78 751.0 79 611.0 80 471.0 81 378.0 82 285.0 83 231.5 84 178.0 85 137.0 86 96.0 87 66.5 88 37.0 89 27.5 90 18.0 91 18.5 92 19.0 93 13.5 94 8.0 95 8.0 96 8.0 97 6.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.005913681750736522 2 3.5840495459009224E-4 3 7.168099091801845E-4 4 0.0 5 0.0 6 3.5840495459009224E-4 7 0.0 8 0.0 9 0.001433619818360369 10 8.960123864752306E-4 11 0.0 12 0.0 13 7.168099091801845E-4 14 0.0 15 0.0037632520231959685 16 7.168099091801845E-4 17 0.0 18 1.7920247729504612E-4 19 0.0 20 8.960123864752306E-4 21 0.0 22 1.7920247729504612E-4 23 5.376074318851384E-4 24 5.376074318851384E-4 25 0.0016128222956554152 26 0.004121656977786061 27 0.006451289182621661 28 0.003942454500491015 29 0.002867239636720738 30 0.004300859455081107 31 0.009139326342047352 32 0.003404847068605876 33 0.0062720867053266145 34 0.0025088346821306455 35 0.0019712272502455074 36 0.008064111478277076 37 0.0046592644096711995 38 0.008422516432867169 39 0.0046592644096711995 40 0.003046442114015784 41 0.004300859455081107 42 0.003046442114015784 43 0.001433619818360369 44 0.0010752148637702768 45 0.0017920247729504611 46 0.0012544173410653228 47 0.0021504297275405536 48 0.0017920247729504611 49 5.376074318851384E-4 50 0.0010752148637702768 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 558028.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.86038794754695 #Duplication Level Percentage of deduplicated Percentage of total 1 83.81491426029717 57.715275117544486 2 11.007228605769887 15.159240640413016 3 2.5897293592801156 5.34989305077543 4 0.9174894604780363 2.527147207452125 5 0.45971354102700684 1.5828026389930119 6 0.2592523908135027 1.0711332124648114 7 0.1527491118863501 0.7362854172196126 8 0.1086868892999408 0.5987377089604812 9 0.08718268097896224 0.5403089911066707 >10 0.5105063810540725 6.847634672825394 >50 0.05568526382582591 2.665613406087183 >100 0.03450915814306126 4.109042988547632 >500 0.002352897146115033 1.0968849476102045 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 894 0.16020701470177123 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 867 0.155368547814805 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 785 0.1406739446766112 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 635 0.11379357308235429 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 597 0.10698387894514252 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 597 0.10698387894514252 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 580 0.10393743683112676 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 579 0.10375823435383172 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 559 0.10017418480793079 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 5.376074318851384E-4 13 0.0 0.0 0.0 0.0 5.376074318851384E-4 14 0.0 0.0 0.0 0.0 5.376074318851384E-4 15 0.0 0.0 0.0 0.0 7.168099091801845E-4 16 0.0 0.0 0.0 0.0 7.168099091801845E-4 17 1.7920247729504612E-4 0.0 0.0 0.0 7.168099091801845E-4 18 1.7920247729504612E-4 0.0 0.0 1.7920247729504612E-4 7.168099091801845E-4 19 1.7920247729504612E-4 0.0 0.0 3.5840495459009224E-4 7.168099091801845E-4 20 1.7920247729504612E-4 0.0 0.0 5.376074318851384E-4 7.168099091801845E-4 21 1.7920247729504612E-4 0.0 0.0 7.168099091801845E-4 7.168099091801845E-4 22 1.7920247729504612E-4 0.0 0.0 0.0010752148637702768 7.168099091801845E-4 23 1.7920247729504612E-4 0.0 0.0 0.0021504297275405536 7.168099091801845E-4 24 1.7920247729504612E-4 0.0 0.0 0.004480061932376153 7.168099091801845E-4 25 1.7920247729504612E-4 0.0 0.0 0.006809694137211753 7.168099091801845E-4 26 1.7920247729504612E-4 0.0 0.0 0.009497731296637444 7.168099091801845E-4 27 1.7920247729504612E-4 0.0 0.0 0.012185768456063137 7.168099091801845E-4 28 1.7920247729504612E-4 0.0 0.0 0.019174665070569936 7.168099091801845E-4 29 1.7920247729504612E-4 0.0 0.0 0.034586078117943904 7.168099091801845E-4 30 1.7920247729504612E-4 0.0 0.0 0.06469209430351165 7.168099091801845E-4 31 1.7920247729504612E-4 0.0 0.0 0.11486878794612457 8.960123864752307E-4 32 1.7920247729504612E-4 0.0 0.0 0.1729303905897195 8.960123864752307E-4 33 1.7920247729504612E-4 0.0 0.0 0.22436150157339774 8.960123864752307E-4 34 1.7920247729504612E-4 0.0 0.0 0.27830144723920663 8.960123864752307E-4 35 1.7920247729504612E-4 0.0 0.0 0.3446063638383737 8.960123864752307E-4 36 1.7920247729504612E-4 0.0 0.0 0.4284731232124553 8.960123864752307E-4 37 1.7920247729504612E-4 0.0 0.0 0.5540940597962827 8.960123864752307E-4 38 1.7920247729504612E-4 0.0 0.0 0.7211107686352656 8.960123864752307E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 1085 0.0 22.504345 2 TAATACC 50 0.002579079 21.999462 4 CATGCGG 50 0.002579079 21.999462 10 GCGGCGT 70 3.211959E-5 21.999462 40 ACGACGG 70 3.211959E-5 21.999462 6 GTCCTAG 70 3.214182E-5 21.99749 1 GCGTTAT 70 3.214182E-5 21.99749 43 TATTATG 70 3.214182E-5 21.99749 2 TAGGACC 470 0.0 21.531387 4 GATATAC 420 0.0 21.473742 1 CTGTAGG 1105 0.0 21.101665 1 ATACACT 430 0.0 20.97623 4 GCTAAGA 95 6.860191E-7 20.839727 1 GTAGGAC 1105 0.0 20.705376 3 TCGTTTA 75 5.4593584E-5 20.53651 30 TACGACG 75 5.4668988E-5 20.532831 5 CGAATGT 280 0.0 20.433565 33 AGTGTAT 295 0.0 20.135101 10 AACGAAT 275 0.0 20.003096 31 GTATAGG 55 0.0044835974 19.997719 1 >>END_MODULE