##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064220_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 946598 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.010329622500787 32.0 32.0 32.0 32.0 32.0 2 30.79109822754749 32.0 32.0 32.0 32.0 32.0 3 31.12409491674396 32.0 32.0 32.0 32.0 32.0 4 31.322693477062067 32.0 32.0 32.0 32.0 32.0 5 31.172333979154825 32.0 32.0 32.0 32.0 32.0 6 34.726585097369735 36.0 36.0 36.0 32.0 36.0 7 34.77675845501469 36.0 36.0 36.0 32.0 36.0 8 34.66929995626443 36.0 36.0 36.0 32.0 36.0 9 34.89286370771964 36.0 36.0 36.0 32.0 36.0 10 34.61081261528125 36.0 36.0 36.0 32.0 36.0 11 34.89001244456464 36.0 36.0 36.0 32.0 36.0 12 34.7359554953634 36.0 36.0 36.0 32.0 36.0 13 34.821529308111785 36.0 36.0 36.0 32.0 36.0 14 34.74953570575894 36.0 36.0 36.0 32.0 36.0 15 34.67937287000395 36.0 36.0 36.0 32.0 36.0 16 34.72304822110336 36.0 36.0 36.0 32.0 36.0 17 34.66814740787536 36.0 36.0 36.0 32.0 36.0 18 34.67430102324324 36.0 36.0 36.0 32.0 36.0 19 34.66525917020741 36.0 36.0 36.0 32.0 36.0 20 34.671904018390066 36.0 36.0 36.0 32.0 36.0 21 34.657127946604575 36.0 36.0 36.0 32.0 36.0 22 34.63496119788971 36.0 36.0 36.0 32.0 36.0 23 34.57086957715947 36.0 36.0 36.0 32.0 36.0 24 34.55339542234402 36.0 36.0 36.0 32.0 36.0 25 34.52225337471662 36.0 36.0 36.0 32.0 36.0 26 34.44505481735647 36.0 36.0 36.0 32.0 36.0 27 34.440777394416635 36.0 36.0 36.0 32.0 36.0 28 34.408342295250996 36.0 36.0 36.0 32.0 36.0 29 34.38355563819066 36.0 36.0 36.0 32.0 36.0 30 34.351309637248335 36.0 36.0 36.0 32.0 36.0 31 34.34577930652716 36.0 36.0 36.0 32.0 36.0 32 34.29544326102527 36.0 36.0 36.0 32.0 36.0 33 34.27357653407254 36.0 36.0 36.0 32.0 36.0 34 34.250392458044495 36.0 36.0 36.0 32.0 36.0 35 34.22470151003911 36.0 36.0 36.0 32.0 36.0 36 34.181359985970815 36.0 36.0 36.0 32.0 36.0 37 34.16342100870697 36.0 36.0 36.0 32.0 36.0 38 34.12625634112897 36.0 36.0 36.0 32.0 36.0 39 34.12848326322261 36.0 36.0 36.0 32.0 36.0 40 34.10207817891016 36.0 36.0 36.0 32.0 36.0 41 34.07456068996554 36.0 36.0 36.0 32.0 36.0 42 34.00029790893283 36.0 36.0 36.0 32.0 36.0 43 33.99595815752833 36.0 36.0 36.0 32.0 36.0 44 33.93087984550992 36.0 36.0 36.0 32.0 36.0 45 33.88193404169457 36.0 36.0 36.0 32.0 36.0 46 33.86786259848426 36.0 36.0 36.0 32.0 36.0 47 33.84527222749256 36.0 36.0 36.0 32.0 36.0 48 33.79487702276996 36.0 36.0 36.0 32.0 36.0 49 33.76490125692216 36.0 36.0 36.0 32.0 36.0 50 33.034600749209275 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 6.0 21 24.0 22 84.0 23 298.0 24 835.0 25 1908.0 26 3977.0 27 7617.0 28 12966.0 29 21104.0 30 31738.0 31 47292.0 32 71485.0 33 116933.0 34 219514.0 35 410812.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.543020022481976 18.840276545213282 12.163509892914796 26.453193539389947 2 15.805158694944835 21.036746405013332 36.68703438425685 26.471060515784984 3 18.0679845805554 24.60931103732634 29.150419872448357 28.172284509669904 4 12.386250551976657 16.2272685976518 36.46109541748451 34.92538543288703 5 14.279451255971384 36.90732496793782 33.38555543113338 15.427668344957416 6 34.12698328855891 36.569733476865025 16.24862533897741 13.054657895598654 7 29.897939672320955 30.864031895304972 20.893157278123635 18.344871154250438 8 27.876564286001027 33.589760384027855 19.258016602612724 19.275658727358394 9 27.166460664067866 13.855946080140294 18.44388806135708 40.53370519443476 10 14.946851554098167 27.505456404752195 32.38157013460892 25.166121906540713 11 37.38778235322703 21.158929133592082 22.344437659914767 19.10885085326612 12 23.862868057198877 24.08608988877996 29.339145059328626 22.71189699469254 13 29.21774442317525 19.72393713896953 25.511833981973304 25.546484455881917 14 22.98010663460797 19.524148079911516 25.895391597480238 31.600353688000276 15 24.876050258147192 27.507492977149724 22.484213773555204 25.13224299114788 16 25.286132327618084 26.361677178081322 23.83936022987777 24.51283026442282 17 23.65502568144027 26.28475868320026 25.587419369151426 24.472796266208043 18 24.392717469157844 25.529952651295062 26.335683513734505 23.74164636581259 19 25.176474068189453 25.39377856281125 25.818457254293797 23.6112901147055 20 25.30424806358785 24.832557923337937 25.34724423090738 24.51594978216684 21 26.181863895761452 24.65376009668307 25.056148438936066 24.108227568619416 22 25.15751175791996 24.83699487426526 25.444751509619735 24.560741858195048 23 24.216794793104942 24.533404606635813 25.923656573958553 25.326144026300696 24 24.24381679195771 25.34861757286107 25.701566454960723 24.705999180220495 25 24.612922309788924 24.831181727904667 25.72672146041539 24.829174501891018 26 24.334477840578945 25.550367122708785 25.974222175268082 24.140932861444192 27 24.800617823271693 25.218451448366647 25.330542845642434 24.650387882719222 28 24.145388085403084 25.130206957752726 26.201548749696276 24.522856207147914 29 24.262265986745984 25.200379048385717 25.860861352594235 24.67649361227407 30 24.236924286154977 25.564673915340112 25.958308154546337 24.24009364395857 31 24.599512960429358 25.339686329612743 25.244180088427793 24.81662062153011 32 24.24009364395857 25.485123034469936 25.229144569199757 25.045638752371737 33 24.17593794800335 25.074876315419715 25.72406849637794 25.025117240198995 34 24.603331392996406 25.07091385643549 25.920084177520756 24.40567057304735 35 25.217257182217136 25.097351078732355 25.5245759972279 24.160815741822613 36 24.3608733410387 25.645993876554897 25.357676387125128 24.63545639528127 37 25.00409374950479 25.383571122955107 25.323036452858496 24.28929867468161 38 24.397165218567228 25.121919267047566 25.815823726292304 24.665091788092905 39 24.83091440391649 25.24599550795405 25.108233797680445 24.814856290449015 40 24.869635401700442 25.485750747958956 25.573857777928026 24.070756072412568 41 24.02912826493917 25.762435398469425 25.871988607311437 24.33644772927997 42 25.09309801676134 25.67424092763128 25.288009609299976 23.944651446307404 43 24.45778830449637 25.151333317839054 25.572214252059506 24.818664125605068 44 24.33017179632912 25.512420424557302 25.25856076468488 24.898847014428693 45 24.398257312610397 25.743515630942422 25.22597043685505 24.632256619592134 46 24.345838179661165 25.488462306397786 25.309082150406777 24.856617363534276 47 24.41161991248513 25.386707120988987 25.743570023516188 24.458102943009692 48 25.106092571248677 25.808622418202816 24.83532806030981 24.2499569502387 49 24.41400555252716 25.87376240761634 25.076484582651943 24.635747457204552 50 24.542910477325382 25.7841064793833 24.98872264250407 24.68426040078725 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 20.0 2 19.0 3 51.5 4 84.0 5 110.0 6 136.0 7 143.0 8 150.0 9 214.5 10 279.0 11 398.0 12 517.0 13 960.5 14 1404.0 15 1886.5 16 2369.0 17 2598.0 18 2827.0 19 3016.5 20 3206.0 21 3850.0 22 4494.0 23 5173.0 24 5852.0 25 6796.0 26 7740.0 27 9262.0 28 10784.0 29 12391.0 30 13998.0 31 15792.0 32 17586.0 33 19628.0 34 21670.0 35 24820.0 36 27970.0 37 32366.5 38 36763.0 39 40189.0 40 43615.0 41 47744.5 42 51874.0 43 53090.5 44 54307.0 45 58988.5 46 63670.0 47 66832.5 48 69995.0 49 71436.5 50 72878.0 51 70957.5 52 69037.0 53 67250.5 54 65464.0 55 65022.5 56 64581.0 57 62308.5 58 60036.0 59 54196.5 60 48357.0 61 42417.0 62 36477.0 63 31854.0 64 27231.0 65 23156.5 66 19082.0 67 16335.5 68 13589.0 69 12187.0 70 10785.0 71 8451.5 72 6118.0 73 5239.5 74 4361.0 75 3479.0 76 2597.0 77 2211.0 78 1825.0 79 1520.5 80 1216.0 81 983.0 82 750.0 83 586.5 84 423.0 85 318.0 86 213.0 87 151.5 88 90.0 89 71.0 90 52.0 91 38.0 92 24.0 93 25.5 94 27.0 95 25.0 96 23.0 97 19.0 98 15.0 99 16.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006549770863661238 2 2.112829310858464E-4 3 1.056414655429232E-4 4 0.0 5 0.0 6 1.056414655429232E-4 7 1.056414655429232E-4 8 0.0 9 8.451317243433856E-4 10 4.225658621716928E-4 11 0.0 12 6.338487932575391E-4 13 2.112829310858464E-4 14 1.056414655429232E-4 15 0.004753865949431543 16 8.451317243433856E-4 17 0.0 18 4.225658621716928E-4 19 0.0 20 2.112829310858464E-4 21 0.0 22 2.112829310858464E-4 23 7.394902588004623E-4 24 2.112829310858464E-4 25 0.0019015463797726173 26 0.005070790346060313 27 0.005176431811603236 28 0.002957961035201849 29 0.001795904914229694 30 0.003591809828459388 31 0.00665541232920416 32 0.003591809828459388 33 0.003908734225088158 34 0.002852319569658926 35 0.0025353951730301564 36 0.007606185519090469 37 0.0034861683629164655 38 0.0073949025880046225 39 0.0038030927595452345 40 0.0023241122419443098 41 0.002746678104116003 42 0.0015846219831438476 43 0.0012676975865150782 44 0.0012676975865150782 45 0.0014789805176009245 46 5.282073277146159E-4 47 0.0016902634486867711 48 0.0020071878453155408 49 2.112829310858464E-4 50 0.0011620561209721549 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 946598.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.02497936836653 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9364801970672 52.459814541338 2 11.338586800923535 14.519055719911247 3 3.055448701777819 5.868751202772815 4 1.2355685456095555 3.1642900256341777 5 0.6405333814693329 2.0505068266662043 6 0.38428983648477 1.476248931144621 7 0.24881655196835314 1.1151332224397337 8 0.19821114499650622 1.0152371575185293 9 0.1440125568271396 0.8298360881678991 >10 0.7121125452863013 8.149244200755748 >50 0.05845471446857714 2.647861491313595 >100 0.044496455429342566 5.464436955819727 >500 0.002988567691639711 1.2395836365176678 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1128293108584636E-4 2 0.0 0.0 0.0 0.0 2.1128293108584636E-4 3 0.0 0.0 0.0 0.0 2.1128293108584636E-4 4 0.0 0.0 0.0 0.0 2.1128293108584636E-4 5 0.0 0.0 0.0 0.0 2.1128293108584636E-4 6 0.0 0.0 0.0 0.0 2.1128293108584636E-4 7 0.0 0.0 0.0 0.0 2.1128293108584636E-4 8 0.0 0.0 0.0 0.0 2.1128293108584636E-4 9 0.0 0.0 0.0 0.0 3.1692439662876954E-4 10 0.0 0.0 0.0 0.0 3.1692439662876954E-4 11 0.0 0.0 0.0 0.0 3.1692439662876954E-4 12 0.0 0.0 0.0 0.0 4.225658621716927E-4 13 0.0 0.0 0.0 0.0 5.282073277146159E-4 14 0.0 0.0 0.0 0.0 5.282073277146159E-4 15 0.0 0.0 0.0 0.0 6.338487932575391E-4 16 0.0 0.0 0.0 0.0 6.338487932575391E-4 17 0.0 0.0 0.0 0.0 6.338487932575391E-4 18 0.0 0.0 0.0 0.0 6.338487932575391E-4 19 0.0 0.0 0.0 0.0 6.338487932575391E-4 20 0.0 0.0 0.0 0.0 8.451317243433855E-4 21 0.0 0.0 0.0 0.0 8.451317243433855E-4 22 0.0 0.0 0.0 3.1692439662876954E-4 8.451317243433855E-4 23 0.0 0.0 0.0 0.0010564146554292318 8.451317243433855E-4 24 0.0 0.0 0.0 0.0012676975865150782 8.451317243433855E-4 25 0.0 0.0 0.0 0.0012676975865150782 8.451317243433855E-4 26 0.0 0.0 0.0 0.0015846219831438478 9.507731898863086E-4 27 0.0 0.0 0.0 0.002746678104116003 9.507731898863086E-4 28 0.0 0.0 0.0 0.00496514888051739 9.507731898863086E-4 29 0.0 0.0 0.0 0.007077978191375853 9.507731898863086E-4 30 0.0 0.0 0.0 0.013416466123951244 9.507731898863086E-4 31 0.0 0.0 0.0 0.02693857371344541 9.507731898863086E-4 32 0.0 0.0 0.0 0.04215094475162635 9.507731898863086E-4 33 0.0 0.0 0.0 0.05630690113437806 9.507731898863086E-4 34 0.0 0.0 0.0 0.07585057225981885 9.507731898863086E-4 35 0.0 0.0 0.0 0.09602809217851717 9.507731898863086E-4 36 0.0 0.0 0.0 0.1271923245136795 9.507731898863086E-4 37 0.0 0.0 0.0 0.17525919133570955 9.507731898863086E-4 38 0.0 0.0 0.0 0.243397936610895 9.507731898863086E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCA 55 1.5932879E-4 23.999943 9 CGTACTA 50 0.0025816471 21.997623 3 GTATCAA 1850 0.0 19.1459 1 GGCGTAC 70 8.1216736E-4 18.8571 1 CCGTCGT 210 0.0 18.857098 9 TGAACCG 60 0.007415563 18.331354 5 GACCCGT 60 0.007415563 18.331354 6 ATAGTAC 110 2.7980095E-6 17.998055 3 CATCGTT 270 0.0 17.925882 28 CGTCGTA 235 0.0 17.787191 10 CGACGAA 75 0.0012896964 17.601816 32 ACCGTCG 225 0.0 17.598099 8 TAAGACT 215 0.0 17.393469 4 CGCGGGA 230 0.0 17.217348 44 ATTATAC 115 4.275307E-6 17.21553 3 ATACCGT 230 0.0 17.21553 6 TACCGTC 245 0.0 17.05938 7 ATCGTTT 290 0.0 16.690496 29 TAACGCC 290 0.0 16.68785 4 ATAACGC 305 0.0 16.588371 3 >>END_MODULE