##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064217_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 369878 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9472258420344 32.0 32.0 32.0 32.0 32.0 2 31.074300174652183 32.0 32.0 32.0 32.0 32.0 3 31.275928819773007 32.0 32.0 32.0 32.0 32.0 4 31.41929501078734 32.0 32.0 32.0 32.0 32.0 5 31.288441053536573 32.0 32.0 32.0 32.0 32.0 6 34.85267574713824 36.0 36.0 36.0 32.0 36.0 7 34.89384878257155 36.0 36.0 36.0 36.0 36.0 8 34.8260399374929 36.0 36.0 36.0 32.0 36.0 9 34.972136758606894 36.0 36.0 36.0 32.0 36.0 10 34.78954682354723 36.0 36.0 36.0 32.0 36.0 11 34.98943165043609 36.0 36.0 36.0 36.0 36.0 12 34.87053839374064 36.0 36.0 36.0 32.0 36.0 13 34.91479623010831 36.0 36.0 36.0 32.0 36.0 14 34.856577033508344 36.0 36.0 36.0 32.0 36.0 15 34.817220813349266 36.0 36.0 36.0 32.0 36.0 16 34.82038942570253 36.0 36.0 36.0 32.0 36.0 17 34.78333666776613 36.0 36.0 36.0 32.0 36.0 18 34.77091094901562 36.0 36.0 36.0 32.0 36.0 19 34.78030053152661 36.0 36.0 36.0 32.0 36.0 20 34.746219023569935 36.0 36.0 36.0 32.0 36.0 21 34.722513909991946 36.0 36.0 36.0 32.0 36.0 22 34.71992116319435 36.0 36.0 36.0 32.0 36.0 23 34.670802264530465 36.0 36.0 36.0 32.0 36.0 24 34.653861543535974 36.0 36.0 36.0 32.0 36.0 25 34.63371706346417 36.0 36.0 36.0 32.0 36.0 26 34.55390426032368 36.0 36.0 36.0 32.0 36.0 27 34.574286656681394 36.0 36.0 36.0 32.0 36.0 28 34.51997956082816 36.0 36.0 36.0 32.0 36.0 29 34.48691730786908 36.0 36.0 36.0 32.0 36.0 30 34.444381660980106 36.0 36.0 36.0 32.0 36.0 31 34.4256944181595 36.0 36.0 36.0 32.0 36.0 32 34.3523756481867 36.0 36.0 36.0 32.0 36.0 33 34.28817339771492 36.0 36.0 36.0 32.0 36.0 34 34.21914793526514 36.0 36.0 36.0 32.0 36.0 35 34.157265368580994 36.0 36.0 36.0 32.0 36.0 36 34.1090494703659 36.0 36.0 36.0 32.0 36.0 37 34.070688172857 36.0 36.0 36.0 32.0 36.0 38 34.015886319272845 36.0 36.0 36.0 32.0 36.0 39 33.97282076792889 36.0 36.0 36.0 32.0 36.0 40 33.92652982875435 36.0 36.0 36.0 32.0 36.0 41 33.86827818902449 36.0 36.0 36.0 32.0 36.0 42 33.77650738892284 36.0 36.0 36.0 32.0 36.0 43 33.75778770297233 36.0 36.0 36.0 32.0 36.0 44 33.64611033908478 36.0 36.0 36.0 27.0 36.0 45 33.54974072532024 36.0 36.0 36.0 21.0 36.0 46 33.46848420289933 36.0 36.0 36.0 21.0 36.0 47 33.39685247568117 36.0 36.0 36.0 21.0 36.0 48 33.3122083497802 36.0 36.0 36.0 21.0 36.0 49 33.250177085417356 36.0 36.0 36.0 14.0 36.0 50 32.53512779889585 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 2.0 21 14.0 22 47.0 23 124.0 24 402.0 25 926.0 26 1905.0 27 3609.0 28 6144.0 29 9080.0 30 13139.0 31 18456.0 32 26465.0 33 41573.0 34 78164.0 35 169826.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.29654864744292 18.283922077570942 12.228035311135445 25.191493963850697 2 15.03584985238296 21.479901372351815 37.723453265418684 25.760795509846545 3 18.666154786172736 26.501981734517866 28.883848187780835 25.94801529152856 4 11.885270278307983 16.11125830679305 35.89724179323993 36.10622962165904 5 13.447947701674606 38.20854443897718 33.07387841396353 15.269629445384695 6 33.19887422034893 35.67104740224453 17.387401757881673 13.742676619524868 7 28.56698695245459 31.23110863582046 21.660926035071025 18.540978376653925 8 28.251747873623195 32.74782495849983 20.129610303938055 18.87081686393892 9 27.85091098836628 13.623865488965132 19.10926182770843 39.41596169496016 10 15.558998150731595 27.805264467010566 32.36057489537034 24.275162486887496 11 36.61126101038721 21.360286364693224 22.980550343626817 19.04790228129275 12 24.29801177685615 24.367764506134453 30.1326383293951 21.201585387614294 13 29.897668131125382 19.930246704967892 26.355931057789796 23.816154106116933 14 23.415081229706093 19.563260218937646 27.270416922382307 29.751241628973958 15 24.364769943709344 27.1725435698334 24.90063969113138 23.562046795325877 16 24.127545447663543 25.900572083617213 26.038185770366283 23.93369669835296 17 22.57744445465802 26.009927597748444 27.102720356441857 24.309907591151678 18 23.520792047085923 25.29381388948218 28.764156733184276 22.421237330247624 19 24.514028950086246 24.956877673178724 27.79484046090873 22.7342529158263 20 24.901588640517364 24.310850122743837 27.617634017887077 23.169927218851726 21 25.86339279438085 24.1457994257566 26.80992110912247 23.18088667074008 22 24.574926259269976 24.67225591210051 27.088734903765303 23.66408292486421 23 23.72152754308888 24.65184183845894 27.491449814126394 24.13518080432579 24 23.716532793334 25.703409511810683 27.21823741405927 23.361820280796046 25 24.143347662692296 24.747073296022926 27.59996755616838 23.50961148511639 26 23.090420944197653 25.708716024214635 28.1904725854988 23.010390446088916 27 23.640473377260697 25.421991980597696 27.689108916245104 23.248425725896503 28 22.858193439192352 25.721686137840226 28.04714177952377 23.372978643443652 29 23.006129163951755 25.299090764077203 27.85295413806435 23.841825933906684 30 23.157203150389744 25.7903687621499 27.75706417851127 23.295363908949085 31 23.13721779099635 25.71177504393673 27.27754495065567 23.873462214411248 32 23.105499378143083 26.124749905369598 26.922078624344348 23.847672092142975 33 23.068749594445524 25.618876127441435 27.44251941254083 23.86985486557221 34 23.507034942195595 25.886532492673066 27.432489428661032 23.17394313647031 35 23.83701124190923 26.081067197309295 27.194713761200003 22.887207799581468 36 23.196368267221125 26.703726635861468 26.708323081457124 23.39158201546028 37 23.61327406830619 26.531914433413363 26.675210347587218 23.179601150693227 38 23.45131905896222 26.643449858995748 26.649939028841658 23.255292053200378 39 23.58439297137558 26.181598933647688 26.763983031371414 23.47002506360532 40 24.204786018833698 26.9181791391006 26.189813150061237 22.687221692004467 41 22.839167380883502 26.702967807521038 27.32318739878173 23.134677412813726 42 24.2284472153805 27.438214945210625 25.955806213517686 22.37753162589119 43 23.41337861001314 26.475502468408163 26.502809064708522 23.60830985687018 44 22.973144690986857 27.15054708263151 26.12938024338215 23.746927982999477 45 23.29624873267996 27.135924298749575 25.777627576884083 23.790199391686382 46 23.10050692801622 26.63413315309226 25.88712402838797 24.37823589050355 47 23.681627819579365 27.003614793345754 25.689095328345985 23.625662058728903 48 23.91961456519623 27.297576432673274 24.98810386408124 23.79470513804925 49 23.454076501313953 27.15802052579783 25.499897262866472 23.888005710021737 50 23.392560709863357 27.573714291893996 24.79384871604925 24.239876282193396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 40.5 2 36.0 3 122.0 4 208.0 5 252.5 6 297.0 7 286.0 8 275.0 9 367.0 10 459.0 11 650.5 12 842.0 13 1373.0 14 1904.0 15 2523.0 16 3142.0 17 3373.0 18 3604.0 19 3652.5 20 3701.0 21 3822.5 22 3944.0 23 4132.5 24 4321.0 25 4086.5 26 3852.0 27 4430.5 28 5009.0 29 5519.5 30 6030.0 31 6786.0 32 7542.0 33 8819.5 34 10097.0 35 11403.5 36 12710.0 37 13610.5 38 14511.0 39 15214.5 40 15918.0 41 17043.5 42 18169.0 43 18652.0 44 19135.0 45 20755.5 46 22376.0 47 24198.0 48 26020.0 49 26516.5 50 27013.0 51 26038.0 52 25063.0 53 24379.0 54 23695.0 55 23636.5 56 23578.0 57 22802.5 58 22027.0 59 20160.0 60 18293.0 61 16175.5 62 14058.0 63 12124.5 64 10191.0 65 8662.0 66 7133.0 67 6050.0 68 4967.0 69 4389.0 70 3811.0 71 2998.5 72 2186.0 73 1808.5 74 1431.0 75 1111.5 76 792.0 77 687.0 78 582.0 79 493.0 80 404.0 81 311.0 82 218.0 83 172.5 84 127.0 85 100.0 86 73.0 87 56.5 88 40.0 89 28.0 90 16.0 91 15.0 92 14.0 93 11.5 94 9.0 95 5.5 96 2.0 97 4.0 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0062182665635696095 2 5.407188316147487E-4 3 0.0 4 0.0 5 0.0 6 2.7035941580737434E-4 7 0.0 8 0.0 9 0.0013517970790368715 10 5.407188316147487E-4 11 0.0 12 0.0 13 8.11078247422123E-4 14 2.7035941580737434E-4 15 0.003244312989688492 16 5.407188316147487E-4 17 0.0 18 2.7035941580737434E-4 19 0.0 20 5.407188316147487E-4 21 0.0 22 2.7035941580737434E-4 23 8.11078247422123E-4 24 2.7035941580737434E-4 25 0.0021628753264589947 26 0.005136828900340112 27 0.006758985395184359 28 0.004055391237110615 29 0.0018925159106516203 30 0.005136828900340112 31 0.007570063642606481 32 0.004866469484532738 33 0.0037850318213032406 34 0.002703594158073743 35 0.003244312989688492 36 0.007299704226799106 37 0.0037850318213032406 38 0.008381141890028605 39 0.005136828900340112 40 0.002433234742266369 41 0.002433234742266369 42 0.0018925159106516203 43 0.0010814376632294973 44 0.0018925159106516203 45 8.11078247422123E-4 46 8.11078247422123E-4 47 0.002433234742266369 48 0.002703594158073743 49 5.407188316147487E-4 50 0.0010814376632294973 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 369878.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.39237011128488 #Duplication Level Percentage of deduplicated Percentage of total 1 82.1705011757526 53.73323825114582 2 11.336396327571205 14.826276487614937 3 3.065686219037238 6.014174636410458 4 1.1998252329419499 3.1383766280559424 5 0.5642899547967165 1.8450128787073548 6 0.3373628286800528 1.32365729729016 7 0.22739030441300614 1.0408713662125122 8 0.1596055464528424 0.834958797236651 9 0.13301042619187897 0.7828080316379179 >10 0.6965252924421911 8.601124406920322 >50 0.07459547162800491 3.4056393289121925 >100 0.03356796223191447 3.8484510312042106 >500 0.0012432578604412766 0.6054108586515179 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 962 0.2600857580066941 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 703 0.19006266931258414 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 569 0.15383450759439599 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 481 0.13004287900334704 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 414 0.11192879814425297 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 398 0.10760304749133497 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 384 0.10381801567003174 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 375 0.10138478092776539 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.7035941580737434E-4 13 0.0 0.0 0.0 0.0 8.11078247422123E-4 14 0.0 0.0 0.0 0.0 8.11078247422123E-4 15 0.0 0.0 0.0 0.0 8.11078247422123E-4 16 0.0 0.0 0.0 2.7035941580737434E-4 8.11078247422123E-4 17 0.0 0.0 0.0 2.7035941580737434E-4 8.11078247422123E-4 18 0.0 0.0 0.0 2.7035941580737434E-4 8.11078247422123E-4 19 0.0 0.0 0.0 2.7035941580737434E-4 8.11078247422123E-4 20 0.0 0.0 0.0 2.7035941580737434E-4 0.001622156494844246 21 0.0 0.0 0.0 2.7035941580737434E-4 0.001622156494844246 22 0.0 0.0 0.0 0.0013517970790368715 0.001622156494844246 23 0.0 0.0 0.0 0.003244312989688492 0.001622156494844246 24 0.0 0.0 0.0 0.006488625979376984 0.001622156494844246 25 0.0 0.0 0.0 0.009462579553258101 0.001622156494844246 26 0.0 0.0 0.0 0.011084736048102348 0.001622156494844246 27 0.0 0.0 0.0 0.012436533127139219 0.001622156494844246 28 0.0 0.0 0.0 0.01757336202747933 0.001622156494844246 29 0.0 0.0 0.0 0.024061988006856314 0.001622156494844246 30 0.0 0.0 0.0 0.04325750652917989 0.001622156494844246 31 0.0 0.0 0.0 0.07597099584187218 0.0018925159106516203 32 0.0 0.0 0.0 0.10381801567003174 0.0018925159106516203 33 0.0 0.0 0.0 0.13193539491399867 0.0018925159106516203 34 0.0 0.0 0.0 0.1665414001373426 0.0021628753264589947 35 0.0 0.0 0.0 0.20790639075587086 0.0021628753264589947 36 0.0 0.0 0.0 0.25413785085893187 0.0021628753264589947 37 0.0 0.0 0.0 0.33010884670080404 0.0021628753264589947 38 0.0 0.0 0.0 0.4390636912711759 0.0021628753264589947 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCA 30 0.0057406146 29.332615 16 ATAAGAC 30 0.0057406146 29.332615 3 GTCCTAA 80 4.290996E-9 27.503042 1 GGCGTTA 65 1.809325E-5 23.691725 42 TCGAGGG 65 1.809325E-5 23.691725 11 CTACTAG 50 0.0025754296 22.002434 1 CGCGGGA 60 2.868037E-4 21.99946 44 CGTATGT 50 0.0025774527 21.999458 33 CAACGTA 50 0.0025774527 21.999458 30 TAGGGCC 50 0.0025774527 21.999458 4 CGACTTT 85 6.0887196E-6 20.708174 24 GATTAAT 85 6.095852E-6 20.705374 38 CGGCGTT 75 5.4605152E-5 20.53283 41 GCGCCGA 75 5.4605152E-5 20.53283 19 CTAAGAG 75 5.4605152E-5 20.53283 2 TTCGGGC 75 5.4605152E-5 20.53283 35 GCATCGA 75 5.4605152E-5 20.53283 8 GTAAACG 65 4.919595E-4 20.309938 27 AACGGGT 65 4.924084E-4 20.307194 41 ACTGTTC 195 0.0 20.307192 8 >>END_MODULE