##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064214_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 921514 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260284705387004 32.0 32.0 32.0 32.0 32.0 2 31.38772498301708 32.0 32.0 32.0 32.0 32.0 3 31.456885082592343 32.0 32.0 32.0 32.0 32.0 4 31.542994463459046 32.0 32.0 32.0 32.0 32.0 5 31.488693606391223 32.0 32.0 32.0 32.0 32.0 6 35.060124968258755 36.0 36.0 36.0 36.0 36.0 7 35.08602039686863 36.0 36.0 36.0 36.0 36.0 8 35.03103154157181 36.0 36.0 36.0 36.0 36.0 9 35.14016173384235 36.0 36.0 36.0 36.0 36.0 10 34.98865671058714 36.0 36.0 36.0 36.0 36.0 11 35.1375627499962 36.0 36.0 36.0 36.0 36.0 12 35.036323919115716 36.0 36.0 36.0 36.0 36.0 13 35.08612348808591 36.0 36.0 36.0 36.0 36.0 14 35.017155463726 36.0 36.0 36.0 36.0 36.0 15 34.99657194573278 36.0 36.0 36.0 36.0 36.0 16 35.00505581032952 36.0 36.0 36.0 36.0 36.0 17 34.96701949183626 36.0 36.0 36.0 36.0 36.0 18 34.964149215313064 36.0 36.0 36.0 36.0 36.0 19 34.96347206879114 36.0 36.0 36.0 36.0 36.0 20 34.940924391816075 36.0 36.0 36.0 36.0 36.0 21 34.955698991008276 36.0 36.0 36.0 36.0 36.0 22 34.94533561074493 36.0 36.0 36.0 36.0 36.0 23 34.88177282168258 36.0 36.0 36.0 32.0 36.0 24 34.85974385630603 36.0 36.0 36.0 32.0 36.0 25 34.8334566810705 36.0 36.0 36.0 32.0 36.0 26 34.76960523659977 36.0 36.0 36.0 32.0 36.0 27 34.770397411216756 36.0 36.0 36.0 32.0 36.0 28 34.73927580047617 36.0 36.0 36.0 32.0 36.0 29 34.71112647230536 36.0 36.0 36.0 32.0 36.0 30 34.69011105637028 36.0 36.0 36.0 32.0 36.0 31 34.683262544030804 36.0 36.0 36.0 32.0 36.0 32 34.63785249057529 36.0 36.0 36.0 32.0 36.0 33 34.60890122125112 36.0 36.0 36.0 32.0 36.0 34 34.59263342716443 36.0 36.0 36.0 32.0 36.0 35 34.541604359781836 36.0 36.0 36.0 32.0 36.0 36 34.5095364801837 36.0 36.0 36.0 32.0 36.0 37 34.496116174035336 36.0 36.0 36.0 32.0 36.0 38 34.45482759892959 36.0 36.0 36.0 32.0 36.0 39 34.439304231948725 36.0 36.0 36.0 32.0 36.0 40 34.42173206267078 36.0 36.0 36.0 32.0 36.0 41 34.40350119477295 36.0 36.0 36.0 32.0 36.0 42 34.32842908517939 36.0 36.0 36.0 32.0 36.0 43 34.31409615046543 36.0 36.0 36.0 32.0 36.0 44 34.24259099698973 36.0 36.0 36.0 32.0 36.0 45 34.205731003544166 36.0 36.0 36.0 32.0 36.0 46 34.16373272679525 36.0 36.0 36.0 32.0 36.0 47 34.128973623840764 36.0 36.0 36.0 32.0 36.0 48 34.07677582760544 36.0 36.0 36.0 32.0 36.0 49 34.047369871754526 36.0 36.0 36.0 32.0 36.0 50 33.45009082878828 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 7.0 20 13.0 21 33.0 22 94.0 23 314.0 24 863.0 25 1963.0 26 3959.0 27 7225.0 28 11722.0 29 17573.0 30 25082.0 31 34309.0 32 49782.0 33 78872.0 34 158609.0 35 531093.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73131995858647 17.93533585547807 11.58667213637814 26.746672049557326 2 15.982337704053451 20.771103112171204 36.74747235789915 26.499086825876194 3 18.413779108442547 24.43920908160619 28.63622897610555 28.510782833845717 4 12.527427689649858 15.97555761496841 35.57797277089659 35.91904192448514 5 14.218774755456781 36.8923315326734 33.33622712188855 15.552666589981271 6 34.04336129821283 35.5627104555226 16.680828159776368 13.7131000864882 7 29.978925984846676 30.406808795091557 20.996316930616356 18.617948289445412 8 28.04819026080993 32.9920109732462 19.535568640302806 19.424230125641063 9 27.701748769675692 13.828790945247176 18.42496785150379 40.04449243357334 10 15.71192933337674 26.890755390608888 32.006163796377685 25.39115147963668 11 37.36004010790938 20.91015437638495 22.589456047330806 19.140349468374872 12 24.739368276667342 23.640303805380512 29.05478068086002 22.565547237092122 13 29.845286372677858 19.457758958404096 25.302737140928627 25.394217527989415 14 23.541878501721627 19.444803154818555 25.656666062586343 31.356652280873476 15 25.130088932538243 27.154213036565977 22.520822368242566 25.194875662653217 16 25.38333988058678 25.583121542344813 24.2334830158458 24.80005556122261 17 23.80886237213976 25.67318564883442 25.6055795137133 24.91237246531252 18 24.539778103811997 24.897559662815024 26.659121096632493 23.90354113674049 19 25.490687597461996 24.653260453189482 25.754058814145868 24.10199313520265 20 25.67598509832264 24.189506970646995 25.52406004512174 24.610447885908627 21 26.489234021403906 23.996705421729892 25.074822520330674 24.439238036535528 22 25.612009814294534 24.145725562200422 25.47495260511789 24.767312018387152 23 24.484511749800596 24.18923391625656 25.87180753224345 25.454446801699394 24 24.784104350468255 24.782910657507788 25.7487167800675 24.68426821195646 25 24.917226897595754 24.359003575711206 25.89010249648669 24.83366703020635 26 24.43494746940463 25.178764638406538 26.160247345796844 24.22604054639199 27 24.923165077876753 24.68658297303398 25.533829070514493 24.856422878574776 28 24.424888819434948 24.72864128559243 26.021786832835218 24.8246830621374 29 24.33284463047227 24.81358933983876 25.832594491295048 25.020971538393923 30 24.179827517165265 25.209906205540417 26.07351410715119 24.536752170143128 31 24.848065219089953 24.748873512124394 25.26588586659258 25.13717540219307 32 24.48775839972045 25.124553847088787 25.223090020607952 25.16459773258281 33 24.229220701704886 24.724516262059534 25.71044092591186 25.33582211032372 34 24.942267289427534 24.798152553261684 25.79751445488167 24.462065702429115 35 25.228978473853047 24.743023210386724 25.84960780653815 24.17839050922208 36 24.411448390972122 25.291793322965695 25.463912043643926 24.832846242418256 37 25.031796536890493 25.066957212496366 25.2904011355596 24.610845115053547 38 24.484070654320828 25.072060808904283 25.53047173783757 24.91339679893732 39 25.07241108006186 24.74825687077783 25.258525733199487 24.92080631596082 40 25.202824127932217 25.078568576042226 25.601635615439378 24.116971680586182 41 24.36597250105807 25.107923037688963 26.102833454513885 24.423271006739085 42 25.213836600839066 25.499892566234543 25.39864438121407 23.887626451712322 43 24.49473903531618 24.782420911900545 25.591424453936174 25.131415598847102 44 24.264812007392305 25.339365533766177 25.281742031190486 25.114080427651036 45 24.359631036353772 25.378838849701573 25.36603364080304 24.895496473141616 46 24.26150378567142 25.094492572444306 25.370780932413528 25.273222709470744 47 24.498448709754083 25.08391291938825 25.584189102226716 24.833449268630947 48 24.912859090001476 25.54216187590613 24.780465677550417 24.76451335654197 49 24.347808157932434 25.637433424343577 25.02561019546222 24.98914822226177 50 24.453772211020702 25.900866194538917 24.886218369574888 24.75914322486549 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 178.0 1 124.0 2 70.0 3 183.5 4 297.0 5 351.5 6 406.0 7 375.0 8 344.0 9 419.0 10 494.0 11 771.0 12 1048.0 13 1733.5 14 2419.0 15 3035.5 16 3652.0 17 3791.5 18 3931.0 19 3890.0 20 3849.0 21 4184.0 22 4519.0 23 4989.0 24 5459.0 25 5858.5 26 6258.0 27 7576.5 28 8895.0 29 10326.0 30 11757.0 31 13450.5 32 15144.0 33 17706.0 34 20268.0 35 23085.0 36 25902.0 37 29536.0 38 33170.0 39 35981.0 40 38792.0 41 41999.0 42 45206.0 43 46909.0 44 48612.0 45 53136.0 46 57660.0 47 61321.5 48 64983.0 49 67541.5 50 70100.0 51 68692.0 52 67284.0 53 67333.0 54 67382.0 55 67104.0 56 66826.0 57 64659.5 58 62493.0 59 57231.5 60 51970.0 61 45935.5 62 39901.0 63 34651.5 64 29402.0 65 25115.0 66 20828.0 67 17706.0 68 14584.0 69 12750.5 70 10917.0 71 8421.0 72 5925.0 73 5109.5 74 4294.0 75 3271.0 76 2248.0 77 1914.0 78 1580.0 79 1335.5 80 1091.0 81 866.0 82 641.0 83 520.0 84 399.0 85 275.0 86 151.0 87 109.5 88 68.0 89 55.0 90 42.0 91 35.5 92 29.0 93 22.5 94 16.0 95 13.0 96 10.0 97 13.0 98 16.0 99 10.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008247297382351217 2 3.2555121246123224E-4 3 3.2555121246123224E-4 4 0.0 5 0.0 6 1.0851707082041077E-4 7 0.0 8 0.0 9 9.766536373836969E-4 10 4.3406828328164306E-4 11 0.0 12 3.2555121246123224E-4 13 5.425853541020538E-4 14 3.2555121246123224E-4 15 0.003146995053791912 16 8.681365665632861E-4 17 0.0 18 2.1703414164082153E-4 19 1.0851707082041077E-4 20 7.596194957428754E-4 21 0.0 22 1.0851707082041077E-4 23 9.766536373836969E-4 24 4.3406828328164306E-4 25 0.0020618243455878043 26 0.005534370611840949 27 0.006293990107583824 28 0.004340682832816431 29 0.0029299609121510905 30 0.0033640291954327335 31 0.00716212667414711 32 0.0027129267705102694 33 0.004774751116098073 34 0.00282144384133068 35 0.003255512124612323 36 0.006185473036763414 37 0.003255512124612323 38 0.007596194957428753 39 0.00423216576199602 40 0.00282144384133068 41 0.002604409699689858 42 0.0017362731331265722 43 0.0010851707082041077 44 0.0016277560623061615 45 0.0015192389914857507 46 0.00141072192066534 47 0.0024958926288694474 48 0.0019533072747673938 49 6.511024249224645E-4 50 0.001302204849844929 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 921514.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.80302228839643 #Duplication Level Percentage of deduplicated Percentage of total 1 79.25015223750879 48.97898925093565 2 12.929852565991059 15.982079326432503 3 3.69232117146763 6.845898229683958 4 1.4920129077792719 3.6884362797623 5 0.7432148012854024 2.296646046445392 6 0.4417278830555198 1.6380070921131873 7 0.2828752934452788 1.223778364594467 8 0.20933630858039382 1.0350093235971767 9 0.14909178896338415 0.8292890840688834 >10 0.6964002260441945 7.57606379124894 >50 0.057306903193188645 2.5256094053778386 >100 0.05270145402543723 6.199874339240252 >500 0.0030064586604360054 1.1803194664994963 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.0851707082041077E-4 0.0 13 0.0 1.0851707082041077E-4 0.0 1.0851707082041077E-4 1.0851707082041077E-4 14 0.0 1.0851707082041077E-4 0.0 1.0851707082041077E-4 1.0851707082041077E-4 15 0.0 1.0851707082041077E-4 0.0 2.1703414164082153E-4 1.0851707082041077E-4 16 0.0 1.0851707082041077E-4 0.0 2.1703414164082153E-4 1.0851707082041077E-4 17 0.0 1.0851707082041077E-4 0.0 3.255512124612323E-4 1.0851707082041077E-4 18 0.0 1.0851707082041077E-4 0.0 3.255512124612323E-4 1.0851707082041077E-4 19 0.0 1.0851707082041077E-4 0.0 3.255512124612323E-4 1.0851707082041077E-4 20 0.0 1.0851707082041077E-4 0.0 3.255512124612323E-4 2.1703414164082153E-4 21 0.0 1.0851707082041077E-4 0.0 5.425853541020538E-4 2.1703414164082153E-4 22 0.0 1.0851707082041077E-4 0.0 0.0010851707082041077 3.255512124612323E-4 23 0.0 1.0851707082041077E-4 0.0 0.002278858487228626 4.3406828328164306E-4 24 0.0 1.0851707082041077E-4 0.0 0.0033640291954327335 4.3406828328164306E-4 25 0.0 1.0851707082041077E-4 0.0 0.004340682832816431 4.3406828328164306E-4 26 0.0 1.0851707082041077E-4 0.0 0.00575140475348177 5.425853541020538E-4 27 0.0 1.0851707082041077E-4 0.0 0.007487677886608342 5.425853541020538E-4 28 0.0 1.0851707082041077E-4 0.0 0.012370946073526826 5.425853541020538E-4 29 0.0 1.0851707082041077E-4 0.0 0.021052311739159685 5.425853541020538E-4 30 0.0 1.0851707082041077E-4 0.0 0.04047686741601321 5.425853541020538E-4 31 0.0 1.0851707082041077E-4 0.0 0.08225593968187135 5.425853541020538E-4 32 0.0 1.0851707082041077E-4 0.0 0.1282671777097255 5.425853541020538E-4 33 0.0 1.0851707082041077E-4 0.0 0.17525506937496338 5.425853541020538E-4 34 0.0 1.0851707082041077E-4 0.0 0.22517292195235233 6.511024249224646E-4 35 0.0 2.1703414164082153E-4 0.0 0.27899738907927607 6.511024249224646E-4 36 0.0 2.1703414164082153E-4 0.0 0.35995112391130246 6.511024249224646E-4 37 0.0 2.1703414164082153E-4 0.0 0.4774751116098073 6.511024249224646E-4 38 0.0 2.1703414164082153E-4 0.0 0.6440488153191378 6.511024249224646E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGTCA 65 4.9316767E-4 20.307243 10 CGAAATT 55 0.0044819852 20.00064 28 TACGACG 265 0.0 19.923006 5 CGACGGT 275 0.0 19.198532 7 ACGACGG 275 0.0 19.198532 6 GAGTGCG 70 8.125498E-4 18.8557 7 GTGTAGG 190 1.8189894E-12 18.526909 1 ACGGTAT 285 0.0 18.525906 9 GACGGTA 290 0.0 18.205505 8 CGAATGC 220 0.0 17.999601 43 GTATCAA 2655 0.0 17.981743 1 CCGGTCC 250 0.0 17.59961 9 AACGCAG 2780 0.0 17.092218 6 CTTTCGT 310 0.0 17.033728 38 GATATAC 195 4.9112714E-11 16.923618 1 TCTAGCG 235 0.0 16.851604 28 TAGGACC 405 0.0 16.838219 4 GTAGGAC 275 0.0 16.798716 3 ATACGAA 225 1.8189894E-12 16.621853 40 TTCGTTC 320 0.0 16.499634 40 >>END_MODULE