##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064213_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1322914 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.253810149412583 32.0 32.0 32.0 32.0 32.0 2 31.292817220166995 32.0 32.0 32.0 32.0 32.0 3 31.407835278786074 32.0 32.0 32.0 32.0 32.0 4 31.513223837679547 32.0 32.0 32.0 32.0 32.0 5 31.41976802724894 32.0 32.0 32.0 32.0 32.0 6 35.03060440814747 36.0 36.0 36.0 36.0 36.0 7 35.054670976344646 36.0 36.0 36.0 36.0 36.0 8 34.99662185145822 36.0 36.0 36.0 36.0 36.0 9 35.13596424257359 36.0 36.0 36.0 36.0 36.0 10 34.95555795766013 36.0 36.0 36.0 36.0 36.0 11 35.12819427415539 36.0 36.0 36.0 36.0 36.0 12 35.01263649791294 36.0 36.0 36.0 36.0 36.0 13 35.0693076042736 36.0 36.0 36.0 36.0 36.0 14 35.006337524585874 36.0 36.0 36.0 36.0 36.0 15 34.97305947325374 36.0 36.0 36.0 36.0 36.0 16 34.9807432682699 36.0 36.0 36.0 36.0 36.0 17 34.9349368137309 36.0 36.0 36.0 32.0 36.0 18 34.946852176331944 36.0 36.0 36.0 36.0 36.0 19 34.942371915332366 36.0 36.0 36.0 36.0 36.0 20 34.935257318313965 36.0 36.0 36.0 32.0 36.0 21 34.9318391066993 36.0 36.0 36.0 32.0 36.0 22 34.92226630000136 36.0 36.0 36.0 32.0 36.0 23 34.85747070482284 36.0 36.0 36.0 32.0 36.0 24 34.83034195722473 36.0 36.0 36.0 32.0 36.0 25 34.80051840104497 36.0 36.0 36.0 32.0 36.0 26 34.72789463260651 36.0 36.0 36.0 32.0 36.0 27 34.74098467474076 36.0 36.0 36.0 32.0 36.0 28 34.71111500823183 36.0 36.0 36.0 32.0 36.0 29 34.67511871519993 36.0 36.0 36.0 32.0 36.0 30 34.65483621762261 36.0 36.0 36.0 32.0 36.0 31 34.65435999619023 36.0 36.0 36.0 32.0 36.0 32 34.61195890284629 36.0 36.0 36.0 32.0 36.0 33 34.58065603659799 36.0 36.0 36.0 32.0 36.0 34 34.56802558594134 36.0 36.0 36.0 32.0 36.0 35 34.51714321565876 36.0 36.0 36.0 32.0 36.0 36 34.493706318022184 36.0 36.0 36.0 32.0 36.0 37 34.480579236443184 36.0 36.0 36.0 32.0 36.0 38 34.42645931632744 36.0 36.0 36.0 32.0 36.0 39 34.43542361786178 36.0 36.0 36.0 32.0 36.0 40 34.40062241385306 36.0 36.0 36.0 32.0 36.0 41 34.3769647913621 36.0 36.0 36.0 32.0 36.0 42 34.29242717213666 36.0 36.0 36.0 32.0 36.0 43 34.293253378526494 36.0 36.0 36.0 32.0 36.0 44 34.218863055346 36.0 36.0 36.0 32.0 36.0 45 34.17982045696092 36.0 36.0 36.0 32.0 36.0 46 34.15475835919795 36.0 36.0 36.0 32.0 36.0 47 34.110440285611915 36.0 36.0 36.0 32.0 36.0 48 34.0664842914959 36.0 36.0 36.0 32.0 36.0 49 34.042566636984716 36.0 36.0 36.0 32.0 36.0 50 33.3807964841252 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 0.0 20 10.0 21 36.0 22 105.0 23 346.0 24 975.0 25 2271.0 26 4771.0 27 8915.0 28 15314.0 29 24203.0 30 35103.0 31 51343.0 32 76164.0 33 125930.0 34 259869.0 35 717556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.47012598228764 18.29937141150812 12.018778277977479 26.211724328226758 2 16.005369996054142 20.636840410429766 36.54802382028655 26.809765773229543 3 18.07070629952627 24.503953030782917 28.87553112118823 28.54980954850258 4 12.21016634490224 15.74040338223044 35.917678700202735 36.13175157266459 5 14.372514010736904 36.759078821450224 33.11129824009724 15.757108927715635 6 34.44648539961147 35.67627427413807 16.45743096658125 13.419809359669213 7 30.152300149518414 30.587627011279643 20.925547692442592 18.33452514675935 8 28.303578312724788 32.59886886071203 19.416152523898 19.68140030266518 9 27.563307884193815 13.740645551440018 18.611308488925847 40.08473807544032 10 15.909879468892088 26.55872159166071 31.39629373457455 26.135105204872644 11 37.60602549071632 20.976814045972787 22.47494733213749 18.942213131173403 12 24.867016954251717 23.57320549423885 28.715947307192536 22.843830244316898 13 29.205218216892533 19.217872196319615 25.76014586092415 25.816763725863705 14 23.701972392700643 19.663907851699776 25.225582068635006 31.408537686964582 15 25.04951423137282 27.315829737567014 22.466156455899828 25.168499575160336 16 25.801367455466988 25.638164782541324 23.878917072027637 24.68155068996406 17 23.939349043097284 25.826546547999342 25.27594386331991 24.958160545583464 18 24.871193246413974 24.58077332430275 26.49632023898793 24.05171319029535 19 25.48396947949753 24.7373601005054 25.647925715503806 24.130744704493264 20 25.860130968947974 24.003767454904306 25.177771108972724 24.958330467174992 21 26.96055828270016 23.972079817735693 24.764270390970236 24.30309150859391 22 25.89509044826145 24.058383368193326 25.227093886134444 24.819432297410785 23 24.256138435883752 23.80205821479272 25.888090806973196 26.053712542350333 24 24.76135978810382 24.875048378123413 25.513412834716142 24.850178999056627 25 24.94829509891964 24.185043072299177 25.696579917332627 25.170081911448555 26 24.437026067380735 25.290492205790414 25.966763957270757 24.305717769558093 27 25.265525191820693 24.508825641607135 25.280114903428203 24.94553426314397 28 24.35323599336284 24.625147880909097 26.013811037490882 25.007805088237184 29 24.37407635584348 24.597754150965503 25.949269966777155 25.07889952641386 30 24.215283924990192 25.054068171630256 26.134448890175655 24.596199013203897 31 24.95046585905165 24.75172452894374 25.004894827358115 25.2929147846465 32 24.70560399371673 24.88302020292121 24.8050840667091 25.606291736652963 33 24.25269361402002 24.47539443217717 25.594643690030093 25.677268263772717 34 25.15789497555699 24.56486752696593 25.66300771124666 24.614229786230425 35 25.745650372825185 24.44718763417776 25.667562696920033 24.13959929607702 36 24.482543301562725 25.174400672504717 25.19526525231022 25.14779077362233 37 25.48357054520935 25.028045126195508 25.04066921265009 24.447715115945055 38 24.534800301477375 24.65749282403715 25.519817904036756 25.28788897044872 39 25.272703357709702 24.604381698524264 24.900556821325818 25.22235812244022 40 25.444220857856887 25.010318411826336 25.32433073949374 24.22112999082304 41 24.32147630307392 25.242956234616802 25.909007069467037 24.52656039284224 42 25.86156327907318 25.44754423283639 25.08114833780084 23.609744150289593 43 24.772771253371392 24.521504335941753 25.37160895489895 25.33411545578791 44 24.44644007220544 25.123592855652614 24.984125688264804 25.445841383877145 45 24.64808322334753 25.321302171444813 25.121967075314956 24.908647529892704 46 24.456008212223697 24.98930385076491 25.09377083481366 25.46091710219774 47 24.825325216741867 24.80748544660277 25.57467115483031 24.792518181825056 48 25.551425705406878 25.53388833076698 24.461235976714597 24.45344998711154 49 24.542314765890573 25.622209270946485 24.705818322829952 25.129657640332994 50 24.654375964266304 25.71243263836867 24.654073597566555 24.979117799798473 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 60.0 1 54.0 2 48.0 3 144.0 4 240.0 5 282.5 6 325.0 7 323.5 8 322.0 9 416.0 10 510.0 11 811.0 12 1112.0 13 1882.5 14 2653.0 15 3509.5 16 4366.0 17 4580.0 18 4794.0 19 4837.5 20 4881.0 21 5387.5 22 5894.0 23 6536.0 24 7178.0 25 7894.0 26 8610.0 27 10285.5 28 11961.0 29 13956.0 30 15951.0 31 18179.0 32 20407.0 33 23568.0 34 26729.0 35 30890.5 36 35052.0 37 41387.0 38 47722.0 39 51905.0 40 56088.0 41 61725.0 42 67362.0 43 68654.5 44 69947.0 45 78061.5 46 86176.0 47 92328.5 48 98481.0 49 101389.5 50 104298.0 51 100357.0 52 96416.0 53 95264.5 54 94113.0 55 94712.0 56 95311.0 57 92825.0 58 90339.0 59 82138.5 60 73938.0 61 65212.0 62 56486.0 63 49395.0 64 42304.0 65 35859.0 66 29414.0 67 24932.0 68 20450.0 69 18754.0 70 17058.0 71 13174.5 72 9291.0 73 7932.0 74 6573.0 75 4986.5 76 3400.0 77 2979.0 78 2558.0 79 2139.0 80 1720.0 81 1376.0 82 1032.0 83 877.0 84 722.0 85 525.0 86 328.0 87 222.5 88 117.0 89 95.5 90 74.0 91 57.5 92 41.0 93 25.5 94 10.0 95 20.0 96 30.0 97 21.0 98 12.0 99 11.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008239386687267652 2 6.04725628423314E-4 3 3.779535177645712E-4 4 0.0 5 0.0 6 3.02362814211657E-4 7 0.0 8 0.0 9 0.0010582698497407996 10 0.0014362233675053707 11 7.559070355291425E-5 12 7.559070355291425E-5 13 7.559070355291425E-4 14 2.2677211065874275E-4 15 0.004686623620280684 16 0.0014362233675053707 17 0.0 18 1.511814071058285E-4 19 0.0 20 3.779535177645712E-4 21 0.0 22 2.2677211065874275E-4 23 0.001511814071058285 24 1.511814071058285E-4 25 0.0016629954781641136 26 0.00551812135936274 27 0.004837805027386512 28 0.00445985150962194 29 0.0021921304030345133 30 0.0035527630669869694 31 0.0067275726162093685 32 0.002721265327904913 33 0.004762214323833598 34 0.003099218845669484 35 0.0031748095492223987 36 0.007407888948185596 37 0.0034771723634340556 38 0.007181116837526854 39 0.003628353770539884 40 0.002721265327904913 41 0.0031748095492223987 42 0.002116539699481599 43 0.0013606326639524565 44 0.0016629954781641136 45 0.001209451256846628 46 6.04725628423314E-4 47 0.002040948995928685 48 0.0018897675888228562 49 5.291349248703998E-4 50 0.0012850419603995422 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1322914.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.421937872393556 #Duplication Level Percentage of deduplicated Percentage of total 1 76.75778824602327 40.23792006655371 2 13.661755029561466 14.323513467750626 3 4.213614215524894 6.626574678734408 4 1.806022320005031 3.787007594218392 5 0.9514802627141778 2.4939219609405665 6 0.5653550457038183 1.778220424903787 7 0.36734962032782437 1.3480025281990797 8 0.26734283109779355 1.121170342595067 9 0.2008680207390682 0.9476901813360684 >10 1.0293119846207288 9.614756343016486 >50 0.08431514508378034 3.0820799117979374 >100 0.0816068483568069 8.951856894923365 >500 0.01029143458392024 3.730963305043574 >1k 0.002898995657442321 1.9563222999868 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1605 0.12132307920242737 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1555 0.11754354402478166 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1554 0.11746795332122874 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1464 0.11066479000146646 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1438 0.10869943170909069 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1434 0.10839706889487902 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1401 0.10590257567763285 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1395 0.10544903145631537 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1385 0.10469312442078624 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1351 0.10212304049998715 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 7.559070355291425E-5 11 0.0 0.0 0.0 0.0 7.559070355291425E-5 12 0.0 0.0 0.0 0.0 1.511814071058285E-4 13 0.0 0.0 0.0 0.0 1.511814071058285E-4 14 0.0 0.0 0.0 0.0 1.511814071058285E-4 15 0.0 0.0 0.0 0.0 1.511814071058285E-4 16 0.0 0.0 0.0 0.0 1.511814071058285E-4 17 7.559070355291425E-5 0.0 0.0 0.0 1.511814071058285E-4 18 7.559070355291425E-5 0.0 0.0 0.0 1.511814071058285E-4 19 7.559070355291425E-5 0.0 0.0 0.0 1.511814071058285E-4 20 7.559070355291425E-5 0.0 0.0 7.559070355291425E-5 1.511814071058285E-4 21 7.559070355291425E-5 0.0 0.0 1.511814071058285E-4 1.511814071058285E-4 22 7.559070355291425E-5 0.0 0.0 3.02362814211657E-4 1.511814071058285E-4 23 7.559070355291425E-5 0.0 0.0 9.826791461878851E-4 1.511814071058285E-4 24 7.559070355291425E-5 0.0 0.0 0.0021921304030345133 1.511814071058285E-4 25 7.559070355291425E-5 0.0 0.0 0.00302362814211657 1.511814071058285E-4 26 7.559070355291425E-5 0.0 0.0 0.0039307165847515405 2.2677211065874275E-4 27 7.559070355291425E-5 0.0 0.0 0.00551812135936274 2.2677211065874275E-4 28 7.559070355291425E-5 0.0 0.0 0.009826791461878853 2.2677211065874275E-4 29 7.559070355291425E-5 0.0 0.0 0.017461452520723193 2.2677211065874275E-4 30 7.559070355291425E-5 0.0 0.0 0.03333550026683518 2.2677211065874275E-4 31 7.559070355291425E-5 0.0 0.0 0.06357178168800089 2.2677211065874275E-4 32 7.559070355291425E-5 0.0 0.0 0.0965293284370715 2.2677211065874275E-4 33 7.559070355291425E-5 0.0 0.0 0.1263120656369197 2.2677211065874275E-4 34 7.559070355291425E-5 0.0 0.0 0.1601011101250724 2.2677211065874275E-4 35 7.559070355291425E-5 0.0 0.0 0.20122245285785773 2.2677211065874275E-4 36 7.559070355291425E-5 0.0 0.0 0.26086351796110707 2.2677211065874275E-4 37 7.559070355291425E-5 0.0 0.0 0.34507156171905357 2.2677211065874275E-4 38 7.559070355291425E-5 0.0 0.0 0.4625395150402823 2.2677211065874275E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACGT 25 0.0023531797 35.199066 17 CTACTAG 65 4.9346447E-4 20.306385 1 GTATCAA 3440 0.0 19.760355 1 CTAGCGG 440 0.0 19.500217 29 GTGTACG 70 8.127398E-4 18.855928 1 CGTATAA 60 0.0074136024 18.332844 44 CGTAACA 60 0.007416836 18.331457 2 CGCAATA 470 0.0 18.256212 36 TAGTACT 85 1.4324971E-4 18.11511 4 ATACGAA 475 0.0 18.063358 40 CCTAATA 100 2.4854819E-5 17.598202 2 ACCGTCG 300 0.0 17.597536 8 GTAAACG 290 0.0 17.450449 27 AACGCAG 3870 0.0 17.392914 6 TAGCGGC 495 0.0 17.334183 30 TCTAGCG 500 0.0 17.16149 28 CGAATGC 490 0.0 17.06077 43 TACCGTC 300 0.0 16.864305 7 TACGAAT 510 0.0 16.823082 41 CGTCGTA 340 0.0 16.822447 10 >>END_MODULE