##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064210_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2115940 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23689235044472 32.0 32.0 32.0 32.0 32.0 2 30.825585319054415 32.0 32.0 32.0 32.0 32.0 3 30.847055209504994 32.0 32.0 32.0 32.0 32.0 4 30.871678781061846 32.0 32.0 32.0 32.0 32.0 5 30.78464228664329 32.0 32.0 32.0 32.0 32.0 6 34.44084236793104 36.0 36.0 36.0 32.0 36.0 7 34.38697505600348 36.0 36.0 36.0 32.0 36.0 8 34.341884457971396 36.0 36.0 36.0 32.0 36.0 9 34.479130315604415 36.0 36.0 36.0 32.0 36.0 10 34.174348516498576 36.0 36.0 36.0 32.0 36.0 11 34.46561102866811 36.0 36.0 36.0 32.0 36.0 12 34.282099208862256 36.0 36.0 36.0 32.0 36.0 13 34.35751202775126 36.0 36.0 36.0 32.0 36.0 14 34.25341597587833 36.0 36.0 36.0 32.0 36.0 15 34.202064330746616 36.0 36.0 36.0 32.0 36.0 16 34.19276728073575 36.0 36.0 36.0 32.0 36.0 17 34.141205327183194 36.0 36.0 36.0 32.0 36.0 18 34.12933542539013 36.0 36.0 36.0 32.0 36.0 19 34.142090040360316 36.0 36.0 36.0 32.0 36.0 20 34.11844523001597 36.0 36.0 36.0 32.0 36.0 21 34.101470741136325 36.0 36.0 36.0 32.0 36.0 22 34.08005992608486 36.0 36.0 36.0 32.0 36.0 23 34.02957361739936 36.0 36.0 36.0 32.0 36.0 24 34.014590678374624 36.0 36.0 36.0 32.0 36.0 25 33.60935754321956 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 21.0 5 26.0 6 79.0 7 24.0 8 136.0 9 148.0 10 178.0 11 63.0 12 136.0 13 121.0 14 231.0 15 397.0 16 681.0 17 916.0 18 1124.0 19 1536.0 20 2261.0 21 3334.0 22 5239.0 23 8076.0 24 11987.0 25 17041.0 26 24002.0 27 31715.0 28 42759.0 29 57436.0 30 75140.0 31 100415.0 32 142345.0 33 199650.0 34 429277.0 35 959437.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.2774962082673 17.259664663320613 11.443042690560572 26.019796437851518 2 16.13213178582181 19.887542790596775 38.39070963741364 25.589615786167773 3 18.78857109369166 24.06094244618597 28.948134550909355 28.202351909213014 4 12.508164567431528 15.74265661554458 36.440957534796894 35.308221282227 5 14.177275616863092 36.88308373646162 34.175810411935274 14.763830234740007 6 33.37414010366495 35.91140739872437 17.30734871638286 13.407103781227814 7 29.533610910995517 30.70948699185608 21.27898445905446 18.477917638093942 8 27.41976736874602 33.79880701193697 19.796633215030496 18.984792404286512 9 27.44482881233474 14.237646533690928 18.692195083201252 39.625329570773076 10 15.438392407487534 27.09764672780966 32.524808307502425 24.939152557200376 11 36.46161826658136 21.180374783250556 23.433292241374826 18.924714708793253 12 24.682039975900583 23.462929176278532 29.665171330017298 22.189859517803587 13 29.447656051967506 20.03038941581952 25.456645190092274 25.065309342120695 14 23.18585267761713 19.84500296052196 25.7227267826031 31.246417579257805 15 24.554245502732574 28.010902867724703 22.542208653536505 24.89264297600622 16 24.800874722983895 26.01643510658322 24.7866396657741 24.39605050465879 17 23.386614709443098 26.20379653450363 25.913712545399513 24.49587621065375 18 23.908125460273734 25.426502591249488 27.097985035693828 23.567386912782943 19 25.17753926674332 24.942191843149644 25.84966994131922 24.030598948787816 20 25.365349750521116 24.986011303528937 25.575594064346586 24.073044881603362 21 25.907189599362823 24.51932809038505 25.04644492917858 24.527037381073548 22 25.222044693678125 25.109094916597847 25.401449427541394 24.267410962182637 23 24.103466935081055 24.961923123495843 25.871936821711294 25.06267311971181 24 24.480113587991912 25.15570106152935 25.98883417174792 24.37535117873082 25 24.431727617098943 25.001951038165142 25.953206300647174 24.613115044088733 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 269.0 1 269.0 2 549.0 3 829.0 4 829.0 5 829.0 6 2328.0 7 3827.0 8 3827.0 9 3827.0 10 4189.5 11 4552.0 12 4552.0 13 4552.0 14 5618.0 15 6684.0 16 6684.0 17 6684.0 18 11409.5 19 16135.0 20 16135.0 21 16135.0 22 25272.0 23 34409.0 24 34409.0 25 34409.0 26 50910.5 27 67412.0 28 67412.0 29 67412.0 30 87048.5 31 106685.0 32 106685.0 33 106685.0 34 125097.5 35 143510.0 36 143510.0 37 143510.0 38 162584.0 39 181658.0 40 181658.0 41 181658.0 42 204691.5 43 227725.0 44 227725.0 45 227725.0 46 251268.0 47 274811.0 48 274811.0 49 274811.0 50 279361.0 51 283911.0 52 283911.0 53 283911.0 54 263453.0 55 242995.0 56 242995.0 57 242995.0 58 220424.0 59 197853.0 60 197853.0 61 197853.0 62 171293.5 63 144734.0 64 144734.0 65 144734.0 66 117168.5 67 89603.0 68 89603.0 69 89603.0 70 67490.0 71 45377.0 72 45377.0 73 45377.0 74 33829.0 75 22281.0 76 22281.0 77 22281.0 78 16923.0 79 11565.0 80 11565.0 81 11565.0 82 7986.5 83 4408.0 84 4408.0 85 4408.0 86 3351.5 87 2295.0 88 2295.0 89 2295.0 90 1635.0 91 975.0 92 975.0 93 975.0 94 675.0 95 375.0 96 375.0 97 375.0 98 718.5 99 1062.0 100 1062.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03837537926406231 2 0.005340416079851035 3 0.0019849334102101197 4 0.004253428736164542 5 0.00921576226168984 6 0.01313836876281936 7 0.023441118368195697 8 0.0353034585101657 9 0.05047402100248589 10 0.05789389113112848 11 0.05534183388942976 12 0.0645575961511196 13 0.06559732317551537 14 0.0684329423329584 15 0.05987882454133861 16 0.0681493804172141 17 0.06521924062118964 18 0.08076788566783556 19 0.07651445693167104 20 0.08190213333081278 21 0.07599459341947314 22 0.08157131109577775 23 0.08487953344612796 24 0.07712884108245036 25 0.0794445967276955 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2115940.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.30007985445499 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1193634511821 40.33348866821562 2 13.045510250933766 13.645624557318946 3 4.009486461645135 6.290893863581903 4 1.7196032360483653 3.5974154625323496 5 0.9223747035777666 2.4120135326423227 6 0.6211659443696099 1.9492217096039135 7 0.4084273477600104 1.4952548031814266 8 0.3123301383572596 1.3067912941630124 9 0.24812255837949113 1.1679146655245154 >10 1.424956777617999 13.68038001170577 >50 0.09396977730518297 3.3913210187545832 >100 0.06669573626417342 6.887219096189579 >500 0.00617688552286506 2.230338786980483 >1k 0.0017258944843299374 1.3496430996512745 >5k 9.083655180683881E-5 0.26247942995435575 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5525 0.2611132640812121 No Hit TATCAACGCAGAGTACTTTTTTTTT 3423 0.16177207293212473 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2506 0.11843436014253714 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4178095787215138E-4 2 0.0 0.0 0.0 0.0 1.4178095787215138E-4 3 0.0 0.0 0.0 0.0 1.4178095787215138E-4 4 0.0 0.0 0.0 0.0 1.4178095787215138E-4 5 0.0 0.0 0.0 0.0 1.4178095787215138E-4 6 0.0 0.0 0.0 0.0 1.4178095787215138E-4 7 0.0 0.0 0.0 0.0 1.4178095787215138E-4 8 0.0 0.0 0.0 0.0 1.4178095787215138E-4 9 0.0 0.0 0.0 4.726031929071713E-5 1.4178095787215138E-4 10 0.0 0.0 0.0 1.4178095787215138E-4 1.4178095787215138E-4 11 0.0 0.0 0.0 1.4178095787215138E-4 1.4178095787215138E-4 12 0.0 0.0 0.0 1.890412771628685E-4 2.8356191574430275E-4 13 0.0 0.0 0.0 1.890412771628685E-4 3.308222350350199E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCCG 50 0.00150114 13.298493 5 CGCGTAA 90 5.4030716E-7 12.667628 10 ACCGTCG 205 0.0 12.513441 8 GCGTAAC 95 1.0396925E-6 12.000628 11 AAGACGG 240 0.0 11.873654 5 CGCGTAT 65 8.025185E-4 11.692367 7 ACGCGTA 65 8.026777E-4 11.692089 6 CAAGACG 245 0.0 11.63051 4 CGTTATT 140 6.85759E-10 11.53059 2 GTATCAA 3155 0.0 11.50053 1 CGTCGTA 240 0.0 11.480039 10 TAGACAG 240 0.0 11.477866 5 GTGTACG 75 2.0775846E-4 11.39817 1 CGAGCCG 245 0.0 11.2462845 15 ACTGTTC 450 0.0 11.190004 8 TAATACC 170 1.0913936E-11 11.174413 4 TACCGTC 230 0.0 11.152229 7 TACGCGT 60 0.005881802 11.082078 5 CGCAAGA 270 0.0 10.902563 2 CGGTTCT 315 0.0 10.857453 12 >>END_MODULE