##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064210_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2115940 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28353686777508 32.0 32.0 32.0 32.0 32.0 2 31.409502632399786 32.0 32.0 32.0 32.0 32.0 3 31.482822291747404 32.0 32.0 32.0 32.0 32.0 4 31.566318988251084 32.0 32.0 32.0 32.0 32.0 5 31.526532888456195 32.0 32.0 32.0 32.0 32.0 6 35.11246065578419 36.0 36.0 36.0 36.0 36.0 7 35.12490382525024 36.0 36.0 36.0 36.0 36.0 8 35.070815335028406 36.0 36.0 36.0 36.0 36.0 9 35.17152376721457 36.0 36.0 36.0 36.0 36.0 10 35.03330434700417 36.0 36.0 36.0 36.0 36.0 11 35.17470722232199 36.0 36.0 36.0 36.0 36.0 12 35.09365813775438 36.0 36.0 36.0 36.0 36.0 13 35.12232577483294 36.0 36.0 36.0 36.0 36.0 14 35.072322466610586 36.0 36.0 36.0 36.0 36.0 15 35.044392563116155 36.0 36.0 36.0 36.0 36.0 16 35.0622531829825 36.0 36.0 36.0 36.0 36.0 17 35.025994593419476 36.0 36.0 36.0 36.0 36.0 18 35.01895422365474 36.0 36.0 36.0 36.0 36.0 19 35.01967352571434 36.0 36.0 36.0 36.0 36.0 20 35.011165250432434 36.0 36.0 36.0 36.0 36.0 21 35.00511829257918 36.0 36.0 36.0 36.0 36.0 22 34.990773367864875 36.0 36.0 36.0 36.0 36.0 23 34.940532812839685 36.0 36.0 36.0 36.0 36.0 24 34.9206825335312 36.0 36.0 36.0 36.0 36.0 25 34.88971473671276 36.0 36.0 36.0 32.0 36.0 26 34.8372269535053 36.0 36.0 36.0 32.0 36.0 27 34.82468359216235 36.0 36.0 36.0 32.0 36.0 28 34.8032982976833 36.0 36.0 36.0 32.0 36.0 29 34.77513540081477 36.0 36.0 36.0 32.0 36.0 30 34.75828946000359 36.0 36.0 36.0 32.0 36.0 31 34.73991984649848 36.0 36.0 36.0 32.0 36.0 32 34.70623741693999 36.0 36.0 36.0 32.0 36.0 33 34.693540459559344 36.0 36.0 36.0 32.0 36.0 34 34.67954148038224 36.0 36.0 36.0 32.0 36.0 35 34.638860270139986 36.0 36.0 36.0 32.0 36.0 36 34.60931642674178 36.0 36.0 36.0 32.0 36.0 37 34.591474238399954 36.0 36.0 36.0 32.0 36.0 38 34.5579822679282 36.0 36.0 36.0 32.0 36.0 39 34.54329092507349 36.0 36.0 36.0 32.0 36.0 40 34.52910574023838 36.0 36.0 36.0 32.0 36.0 41 34.51525563106704 36.0 36.0 36.0 32.0 36.0 42 34.45657485561973 36.0 36.0 36.0 32.0 36.0 43 34.44782744312221 36.0 36.0 36.0 32.0 36.0 44 34.38933854457121 36.0 36.0 36.0 32.0 36.0 45 34.3575025756874 36.0 36.0 36.0 32.0 36.0 46 34.322178322636745 36.0 36.0 36.0 32.0 36.0 47 34.288092762554705 36.0 36.0 36.0 32.0 36.0 48 34.25074529523521 36.0 36.0 36.0 32.0 36.0 49 34.222157055493064 36.0 36.0 36.0 32.0 36.0 50 33.64777356635821 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 1.0 19 10.0 20 22.0 21 57.0 22 238.0 23 722.0 24 1815.0 25 4036.0 26 8162.0 27 14862.0 28 24727.0 29 37455.0 30 52698.0 31 74821.0 32 106576.0 33 170244.0 34 351250.0 35 1268241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.273363715167 18.122376211043147 11.953039554046862 26.651220519742992 2 15.440699001008538 20.59189936926199 37.907845896894706 26.059555732834767 3 18.13518493750505 24.680908781997143 29.123114128012677 28.060792152485124 4 12.165137007665622 16.326549902171138 36.56280423830543 34.9455088518578 5 13.792546102441468 37.29533918731155 33.93763528266397 14.974479427583013 6 33.446159575564124 36.163488722259345 17.13051138549428 13.259840316682247 7 29.500263949257466 30.751340895310207 21.301106790986687 18.447288364445633 8 27.42180780173351 34.00337438679736 19.618798264601075 18.95601954686806 9 27.399609720041003 14.104239438503496 18.578138934561235 39.91801190689427 10 15.366641760254755 27.163254204670213 32.64044357043576 24.829660464639275 11 36.62991389169825 21.121345595810844 23.402364906377308 18.846375606113593 12 24.53421388801851 23.483663754011815 29.744241209222004 22.23788114874767 13 29.592174792089153 19.93160457500741 25.49497124433642 24.98124938856702 14 23.126844633696216 19.711475068941155 25.84758038408552 31.31409991327711 15 24.618735147826975 28.022186807016748 22.520762321750293 24.838315723405984 16 24.88253369919364 25.991315386265875 24.712064599612653 24.41408631492784 17 23.470797848710266 26.19341758272919 25.865620008128776 24.47016456043177 18 24.065035962790954 25.339932143537354 27.100901397347844 23.49413049632385 19 25.223635830883673 24.935300622891006 25.902388536536954 23.938675009688364 20 25.46333076393395 24.888311469808297 25.68068210228226 23.967675663975495 21 25.871527548040113 24.463028252218873 25.156006313978658 24.509437885762356 22 25.285429507725667 24.929511033898034 25.533972231648054 24.251087226728245 23 24.23261839125982 24.74544278187028 25.910132145265745 25.111806681604154 24 24.594138466708035 25.11466583740207 26.0015095010187 24.289686194871194 25 24.622431599105443 24.85585384619747 26.08917779033871 24.432536764358375 26 24.069069494857835 25.467899274047184 26.346699183303084 24.116332047791893 27 24.418709617350544 25.335881084366445 25.796877193264372 24.44853210501864 28 24.026406134208496 25.294819346349872 25.94821425870752 24.73056026073411 29 24.296940870439755 25.065362380759737 25.72928915220786 24.90840759659265 30 24.16764420363899 25.42892683927402 25.901452930295076 24.501976026791915 31 24.83190707601969 24.82954389699564 25.510470300983933 24.828078726000737 32 24.262115177663752 25.53586476353327 25.39776612934861 24.80425392945438 33 24.02857099645911 25.136777052459248 26.080746668481535 24.753905282600105 34 24.565228384772112 25.135345513287373 26.134881876627276 24.16454422531324 35 24.88283856770976 25.20993589440631 25.933510532713516 23.973715005170416 36 24.12914654423532 25.488775393492197 25.766873775284786 24.615204286987698 37 24.753269340743998 25.209062938649353 25.489987570124818 24.547680150481835 38 24.400756029305352 25.42032743309712 25.694173006691113 24.484743530906407 39 24.887657761208704 24.930524572560703 25.407541912115 24.774275754115592 40 25.201923722221014 25.169738805934877 25.74821659645219 23.880120875391913 41 24.328419508409553 25.016978855476268 26.321455932721673 24.33314570339251 42 24.88175244576776 25.62899948012666 25.748901176804196 23.740346897301386 43 24.129960220406453 25.107459725347358 26.094269649592682 24.66831040465351 44 23.909431101642127 25.48151767983009 25.65581587909527 24.95323533943251 45 24.025832856785023 25.625475563705454 25.6764229102372 24.672268669272324 46 24.16890800743506 25.026690504985773 25.692972469198992 25.11142901838018 47 24.524268632733115 25.17968713077178 25.88799092584716 24.40805331064795 48 24.524034126247454 25.483149550925653 25.370715550959684 24.62210077186721 49 24.358285446656392 25.419330385224864 25.451183945805468 24.77120022231328 50 24.078598880480627 25.955145497819377 25.29202592929371 24.674229692406286 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 113.0 1 94.0 2 75.0 3 254.5 4 434.0 5 478.5 6 523.0 7 497.0 8 471.0 9 652.5 10 834.0 11 1209.0 12 1584.0 13 2742.0 14 3900.0 15 4956.5 16 6013.0 17 6180.0 18 6347.0 19 6298.5 20 6250.0 21 7145.5 22 8041.0 23 9425.0 24 10809.0 25 13157.5 26 15506.0 27 19729.0 28 23952.0 29 28196.0 30 32440.0 31 36998.5 32 41557.0 33 49118.0 34 56679.0 35 65511.0 36 74343.0 37 82011.0 38 89679.0 39 94304.0 40 98929.0 41 104352.5 42 109776.0 43 113407.0 44 117038.0 45 126177.0 46 135316.0 47 141963.5 48 148611.0 49 152622.5 50 156634.0 51 155728.5 52 154823.0 53 153522.5 54 152222.0 55 149231.0 56 146240.0 57 139885.0 58 133530.0 59 122549.0 60 111568.0 61 98425.5 62 85283.0 63 73474.5 64 61666.0 65 51879.5 66 42093.0 67 35705.0 68 29317.0 69 25238.0 70 21159.0 71 16454.5 72 11750.0 73 9929.0 74 8108.0 75 6324.0 76 4540.0 77 3836.5 78 3133.0 79 2611.5 80 2090.0 81 1636.5 82 1183.0 83 982.5 84 782.0 85 524.5 86 267.0 87 195.5 88 124.0 89 97.5 90 71.0 91 58.0 92 45.0 93 38.0 94 31.0 95 31.0 96 31.0 97 21.0 98 11.0 99 15.0 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00954658449672486 2 2.835619157443028E-4 3 4.253428736164542E-4 4 0.0 5 0.0 6 9.452063858143426E-5 7 1.417809578721514E-4 8 0.0 9 0.001086987343686494 10 8.979460665236254E-4 11 0.0 12 4.726031929071713E-5 13 4.253428736164542E-4 14 2.3630159645358562E-4 15 0.004158908097583108 16 6.616444700700398E-4 17 0.0 18 1.417809578721514E-4 19 0.0 20 5.198635121978885E-4 21 0.0 22 2.835619157443028E-4 23 5.198635121978885E-4 24 4.253428736164542E-4 25 0.001512330217302948 26 0.004726031929071713 27 0.00411164777829239 28 0.003213701711768765 29 0.002079454048791554 30 0.003686304904675936 31 0.0069000066164447 32 0.002882879476733745 33 0.004158908097583108 34 0.0027883588381523105 35 0.0026465778802801593 36 0.006710965339281832 37 0.003308222350350199 38 0.007041787574316852 39 0.003969866820420239 40 0.0019849334102101197 41 0.00345000330822235 42 0.001890412771628685 43 0.001465069898012231 44 0.0012287683015586453 45 0.0014178095787215138 46 8.979460665236254E-4 47 0.001890412771628685 48 0.001512330217302948 49 3.308222350350199E-4 50 0.001512330217302948 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2115940.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.620195856582114 #Duplication Level Percentage of deduplicated Percentage of total 1 78.52697050277648 44.4621244989125 2 12.54192924202592 14.20252980205804 3 3.7060600330637525 6.295135347849623 4 1.6298327635466066 3.6912580114193334 5 0.8617740013172241 2.4396906369345843 6 0.512894550826636 1.7424113952946705 7 0.3914759843520378 1.5515812835012455 8 0.2773190579813432 1.2561487502133202 9 0.21036243465307225 1.0719686025831965 >10 1.2084217644715711 12.526797650232508 >50 0.0764727299410956 2.9651056022410827 >100 0.05161357213415927 5.696319227591907 >500 0.00403312792567948 1.5304642462402553 >1k 8.402349845165424E-4 0.5684649449277136 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.452063858143426E-5 2 0.0 0.0 0.0 0.0 9.452063858143426E-5 3 0.0 0.0 0.0 0.0 9.452063858143426E-5 4 0.0 0.0 0.0 0.0 9.452063858143426E-5 5 0.0 4.726031929071713E-5 0.0 0.0 9.452063858143426E-5 6 0.0 4.726031929071713E-5 0.0 0.0 9.452063858143426E-5 7 0.0 4.726031929071713E-5 0.0 0.0 9.452063858143426E-5 8 0.0 4.726031929071713E-5 0.0 0.0 9.452063858143426E-5 9 0.0 4.726031929071713E-5 0.0 0.0 9.452063858143426E-5 10 0.0 4.726031929071713E-5 0.0 4.726031929071713E-5 9.452063858143426E-5 11 0.0 4.726031929071713E-5 0.0 4.726031929071713E-5 9.452063858143426E-5 12 0.0 4.726031929071713E-5 0.0 4.726031929071713E-5 2.8356191574430275E-4 13 0.0 4.726031929071713E-5 0.0 9.452063858143426E-5 3.308222350350199E-4 14 0.0 4.726031929071713E-5 0.0 9.452063858143426E-5 3.308222350350199E-4 15 0.0 4.726031929071713E-5 0.0 9.452063858143426E-5 5.198635121978885E-4 16 0.0 4.726031929071713E-5 0.0 2.3630159645358565E-4 5.671238314886055E-4 17 0.0 4.726031929071713E-5 0.0 2.3630159645358565E-4 5.671238314886055E-4 18 0.0 4.726031929071713E-5 0.0 2.3630159645358565E-4 5.671238314886055E-4 19 0.0 9.452063858143426E-5 0.0 2.3630159645358565E-4 5.671238314886055E-4 20 0.0 9.452063858143426E-5 0.0 3.308222350350199E-4 6.143841507793227E-4 21 0.0 9.452063858143426E-5 0.0 3.308222350350199E-4 6.616444700700398E-4 22 0.0 9.452063858143426E-5 0.0 4.2534287361645413E-4 7.089047893607569E-4 23 0.0 9.452063858143426E-5 0.0 9.924667051050596E-4 7.089047893607569E-4 24 0.0 9.452063858143426E-5 0.0 0.0013232889401400797 7.089047893607569E-4 25 0.0 9.452063858143426E-5 0.0 0.0015595905365936651 7.089047893607569E-4 26 0.0 9.452063858143426E-5 0.0 0.002268495325954422 7.56165108651474E-4 27 0.0 9.452063858143426E-5 0.0 0.003024660434605896 7.56165108651474E-4 28 0.0 9.452063858143426E-5 0.0 0.007089047893607569 7.56165108651474E-4 29 0.0 9.452063858143426E-5 0.0 0.016352070474588126 7.56165108651474E-4 30 0.0 9.452063858143426E-5 0.0 0.0322787980755598 7.56165108651474E-4 31 0.0 9.452063858143426E-5 0.0 0.0667788311577833 8.506857472329083E-4 32 0.0 9.452063858143426E-5 0.0 0.1056740739340435 9.452063858143426E-4 33 0.0 9.452063858143426E-5 0.0 0.1390398593532898 9.452063858143426E-4 34 0.0 9.452063858143426E-5 4.726031929071713E-5 0.1746741400984905 0.0011815079822679283 35 0.0 9.452063858143426E-5 4.726031929071713E-5 0.21952418310538105 0.0011815079822679283 36 0.0 9.452063858143426E-5 4.726031929071713E-5 0.2823804077620348 0.0011815079822679283 37 0.0 9.452063858143426E-5 4.726031929071713E-5 0.38105995444105223 0.0011815079822679283 38 0.0 9.452063858143426E-5 4.726031929071713E-5 0.5211395408187378 0.0012287683015586453 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3505 0.0 23.036692 1 CGGCTAA 105 7.75708E-8 20.951334 9 TAGGACG 1085 0.0 19.869976 4 AGGACGT 1140 0.0 18.332418 5 GGACGTG 1165 0.0 18.12785 6 TTAGGAC 755 0.0 18.065323 3 GTAGGAC 1180 0.0 17.897411 3 TAGTACG 75 0.001291942 17.598705 7 AACGCAG 4520 0.0 17.569918 6 GACGTGA 735 0.0 16.760672 7 TGTAGGA 1230 0.0 16.633316 2 GATATAC 650 0.0 16.585354 1 TATACTG 320 0.0 16.499176 5 TATCGAG 80 0.0019896787 16.499176 10 TCAACGC 4920 0.0 16.096756 4 TATCAAC 5015 0.0 15.923432 2 GTATTAG 365 0.0 15.671932 1 ATCAACG 5070 0.0 15.663913 3 CAACGCA 5050 0.0 15.638823 5 TAGGACC 985 0.0 15.633738 4 >>END_MODULE