##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064209_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1903945 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35210260800601 32.0 32.0 32.0 32.0 32.0 2 31.370487067641136 32.0 32.0 32.0 32.0 32.0 3 31.461062163035173 32.0 32.0 32.0 32.0 32.0 4 31.54318533360995 32.0 32.0 32.0 32.0 32.0 5 31.477945003663446 32.0 32.0 32.0 32.0 32.0 6 35.08408015987857 36.0 36.0 36.0 36.0 36.0 7 35.105895916111024 36.0 36.0 36.0 36.0 36.0 8 35.04349600434887 36.0 36.0 36.0 36.0 36.0 9 35.17346982186985 36.0 36.0 36.0 36.0 36.0 10 35.023375150017465 36.0 36.0 36.0 36.0 36.0 11 35.176198367074676 36.0 36.0 36.0 36.0 36.0 12 35.08436115539052 36.0 36.0 36.0 36.0 36.0 13 35.124846568572096 36.0 36.0 36.0 36.0 36.0 14 35.06564107681682 36.0 36.0 36.0 36.0 36.0 15 35.03747272111327 36.0 36.0 36.0 36.0 36.0 16 35.05567492758457 36.0 36.0 36.0 36.0 36.0 17 35.02264876348844 36.0 36.0 36.0 36.0 36.0 18 35.00577327601375 36.0 36.0 36.0 36.0 36.0 19 35.012551307942196 36.0 36.0 36.0 36.0 36.0 20 35.003936038068325 36.0 36.0 36.0 36.0 36.0 21 35.0060542715257 36.0 36.0 36.0 36.0 36.0 22 34.996380147535774 36.0 36.0 36.0 36.0 36.0 23 34.947912886139044 36.0 36.0 36.0 36.0 36.0 24 34.91506424817944 36.0 36.0 36.0 32.0 36.0 25 34.88934396739402 36.0 36.0 36.0 32.0 36.0 26 34.82994781887082 36.0 36.0 36.0 32.0 36.0 27 34.827698804324704 36.0 36.0 36.0 32.0 36.0 28 34.80814571849502 36.0 36.0 36.0 32.0 36.0 29 34.792066997733656 36.0 36.0 36.0 32.0 36.0 30 34.77408170929307 36.0 36.0 36.0 32.0 36.0 31 34.74287072368162 36.0 36.0 36.0 32.0 36.0 32 34.72313223333657 36.0 36.0 36.0 32.0 36.0 33 34.7113120389507 36.0 36.0 36.0 32.0 36.0 34 34.702371654643386 36.0 36.0 36.0 32.0 36.0 35 34.65924750977575 36.0 36.0 36.0 32.0 36.0 36 34.630074923382764 36.0 36.0 36.0 32.0 36.0 37 34.62799082956703 36.0 36.0 36.0 32.0 36.0 38 34.60043173516042 36.0 36.0 36.0 32.0 36.0 39 34.60444130476458 36.0 36.0 36.0 32.0 36.0 40 34.57835546720099 36.0 36.0 36.0 32.0 36.0 41 34.55590944066137 36.0 36.0 36.0 32.0 36.0 42 34.50101027077988 36.0 36.0 36.0 32.0 36.0 43 34.50614487288236 36.0 36.0 36.0 32.0 36.0 44 34.44515781705879 36.0 36.0 36.0 32.0 36.0 45 34.40297172449834 36.0 36.0 36.0 32.0 36.0 46 34.375181005753845 36.0 36.0 36.0 32.0 36.0 47 34.37210581188007 36.0 36.0 36.0 32.0 36.0 48 34.31182255789952 36.0 36.0 36.0 32.0 36.0 49 34.322651127002096 36.0 36.0 36.0 32.0 36.0 50 33.69655005790609 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 1.0 20 17.0 21 39.0 22 137.0 23 457.0 24 1139.0 25 2745.0 26 5857.0 27 11118.0 28 19326.0 29 30570.0 30 45368.0 31 66693.0 32 99582.0 33 164079.0 34 348758.0 35 1108056.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.522511231584694 17.974895248040347 12.025477693623696 25.477115826751263 2 16.6009169421047 19.770874771591707 36.30335457528269 27.324853711020904 3 18.71226899195247 22.9637729800025 27.973547457952936 30.350410570092095 4 12.172305397477343 15.17843215008837 34.99549619342996 37.65376625900433 5 14.302671558264551 36.53246286000908 32.81392057018454 16.350945011541825 6 35.261547382320224 35.818288200561156 15.477132133504348 13.44303228361428 7 32.01375670713004 30.129720201854678 19.055234817830776 18.801288273184504 8 29.480263347943346 31.733217083476678 18.58677640373015 20.199743164849828 9 27.370296409824373 13.168424270372988 18.203830206973198 41.25744911282944 10 15.712734784474405 27.51465786240754 29.86637617933881 26.90623117377925 11 38.5625109969038 21.4948436010494 20.434571376799223 19.50807402524758 12 25.132461879130897 23.30430937044367 28.257711361258526 23.30551738916691 13 29.45082626331914 19.28192851324075 24.92288331574693 26.34436190769318 14 24.049615034935467 19.499574303588506 24.26879222496099 32.18201843651504 15 25.997920015127164 27.057819377475234 21.540291828180642 25.403968779216957 16 27.067848857332994 25.928044358936788 22.528274515303405 24.47583226842682 17 24.69903279769111 25.22026634172731 24.136884206213942 25.94381665436764 18 24.647861432462612 26.209676995784527 24.550431789270448 24.592029782482413 19 25.93884063817003 25.187978217846744 24.296723012861722 24.576458131121505 20 26.410607101514127 24.49798627261898 24.32319011393264 24.76821651193425 21 27.390864757122714 23.3591306471563 24.525971075845156 24.72403351987584 22 27.026439341934083 23.33467966215375 24.837770878645003 24.801110117267168 23 25.312420722896885 23.469909234774725 25.259477405336245 25.958192636992145 24 25.822952217981886 25.447152165669262 23.347503962839124 25.38239165350973 25 25.651332393160374 24.41555644845725 24.808958430173774 25.124152728208603 26 25.231727449545737 24.824973356661463 25.44377113148967 24.49952806230313 27 25.683822166054476 24.264781195290944 24.550207188595987 25.501189450058593 28 25.259445235231397 24.21667445781487 24.97344881740875 25.550431489544977 29 25.31502491994052 24.93259876978639 25.129248063314353 24.623128246958736 30 25.169891515246377 25.081754875090738 24.804528899678655 24.943824709984234 31 25.576200133521798 24.602835683621624 23.809898997220834 26.011065185635747 32 25.203583831788073 23.551119711074833 23.875929415867773 27.36936704126932 33 25.034298596331254 23.535665287719524 25.37817747869075 26.051858637258462 34 25.34755049645569 24.083983578934983 25.53705664595125 25.031409278658078 35 26.18299280424392 23.79242607279794 25.02274279111298 25.00183833184516 36 25.760007900006094 23.9155350678329 24.570174535506954 25.754282496654053 37 25.886192167977327 23.70117591691896 24.40783958619154 26.00479232891218 38 25.418661355201106 24.253153945307453 24.243226463200557 26.084958236290884 39 26.694791954458886 23.76353958427659 24.43632994408208 25.10533851718244 40 26.16491088559752 24.588515894471406 24.031449114213395 25.215124105717685 41 25.211356526525663 25.22732381878804 24.67603204383442 24.885287610851876 42 25.825692072872886 24.21180954221768 24.258187590011755 25.70431079489768 43 24.98057957175789 24.290425610699593 24.8567300253214 25.87226479222111 44 25.60740536094517 24.5738524453259 24.19437181643327 25.624370377295662 45 26.373899378336528 24.60549895899206 23.600154207836027 25.420447454835383 46 25.93367207056547 24.2242640763808 23.56084822267999 26.281215630373744 47 25.249841772567432 23.80423392973914 24.83427481938437 26.111649478309058 48 25.560648580737226 24.52546363774357 23.954060877845656 25.959826903673545 49 25.916442657271404 24.326264825850423 24.321327690292435 25.43596482658574 50 25.646416680541556 25.53611787056067 24.026652394350812 24.790813054546966 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 28.5 2 44.0 3 136.0 4 228.0 5 267.5 6 307.0 7 280.5 8 254.0 9 336.5 10 419.0 11 643.0 12 867.0 13 1541.5 14 2216.0 15 2947.0 16 3678.0 17 3588.5 18 3499.0 19 3354.5 20 3210.0 21 3508.0 22 3806.0 23 4236.5 24 4667.0 25 5927.5 26 7188.0 27 8858.5 28 10529.0 29 12236.5 30 13944.0 31 15920.0 32 17896.0 33 21021.5 34 24147.0 35 28701.0 36 33255.0 37 44588.0 38 55921.0 39 65100.5 40 74280.0 41 88011.5 42 101743.0 43 107671.5 44 113600.0 45 124758.0 46 135916.0 47 138306.5 48 140697.0 49 152917.5 50 165138.0 51 154384.5 52 143631.0 53 144536.5 54 145442.0 55 141597.5 56 137753.0 57 139223.5 58 140694.0 59 133009.5 60 125325.0 61 108980.5 62 92636.0 63 78131.0 64 63626.0 65 54809.0 66 45992.0 67 38615.0 68 31238.0 69 28744.5 70 26251.0 71 21550.0 72 16849.0 73 12428.5 74 8008.0 75 5650.0 76 3292.0 77 2779.5 78 2267.0 79 1846.5 80 1426.0 81 1148.0 82 870.0 83 742.0 84 614.0 85 441.0 86 268.0 87 192.0 88 116.0 89 85.5 90 55.0 91 47.0 92 39.0 93 30.5 94 22.0 95 28.5 96 35.0 97 26.0 98 17.0 99 17.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008508649146902879 2 4.201802047853273E-4 3 3.676576791871614E-4 4 0.0 5 0.0 6 3.676576791871614E-4 7 5.252252559816591E-5 8 0.0 9 0.0014181081911504795 10 9.454054607669865E-4 11 0.0 12 5.252252559816591E-5 13 6.30270307177991E-4 14 3.151351535889955E-4 15 0.004464414675844103 16 0.00115549556315965 17 0.0 18 3.676576791871614E-4 19 5.252252559816591E-5 20 6.827928327761568E-4 21 0.0 22 1.0504505119633182E-4 23 0.00115549556315965 24 3.676576791871614E-4 25 0.002100901023926637 26 0.004832072355031264 27 0.006512793174172572 28 0.0039391894198624435 29 0.002521081228711964 30 0.004359369624647771 31 0.007143063481350565 32 0.0032038740614881204 33 0.004044234471058775 34 0.00257360375431013 35 0.002363513651917466 36 0.007825856314126722 37 0.0036240542662734484 38 0.007300631058145063 39 0.004359369624647771 40 0.0023109911263193 41 0.002783693856702793 42 0.0014181081911504795 43 0.00115549556315965 44 0.0014181081911504795 45 0.0011029730375614842 46 5.77747781579825E-4 47 0.002100901023926637 48 0.0017857658703376413 49 3.676576791871614E-4 50 0.0013655856655523137 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1903945.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.58237735629537 #Duplication Level Percentage of deduplicated Percentage of total 1 69.98317447539713 28.400835951520246 2 15.60729971139918 12.667626528016026 3 5.984137359355705 7.285515614078343 4 2.8351549294386933 4.602293088401681 5 1.5366444231667946 3.1180341921700845 6 0.9274383319708346 2.2582591417640123 7 0.6182889252530929 1.756414413588752 8 0.41657449577508343 1.3524466707642324 9 0.3096468208563614 1.1309583718053045 >10 1.4829622252573105 10.72487370747684 >50 0.13442830209228335 3.85953314959992 >100 0.13535711786497462 11.50013441155556 >500 0.019652365802127904 5.588271063315289 >1k 0.009240516370536963 5.754803695943857 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCCTGGTCAGTGCCAGTTCTGAGTTAATCTTTCATTGGAGCCCGAGACA 3473 0.18241073140243022 No Hit GTCATACACCGGCGCAGAAGCGTTGTTCGAAGGTCTTGGCTGAAGGCACC 2891 0.15184262150429764 No Hit GTTCTAAGTTGGTTGTTAAGCGTACACCAGACGTCCGAAGACAGCCAAGG 2886 0.15158000887630682 No Hit ATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGAAAAGGA 2800 0.14706307167486457 No Hit GTCCTTGACAGTCCTTGAAAATCCAAGGGAATGAATAATTTTTGCGCCTG 2700 0.14181081911504798 No Hit GTCCCAATCAGTCCGGCCGTTTCCAACCAAGGCCCGATGCACCCAACCCT 2169 0.11392135802242187 No Hit GTCTACCACCCTGAAATCGGATTATCCGGAGCTAGGGTTCAATGGCTGGT 2149 0.11287090751045854 No Hit TCGCAATGCTATGTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCA 2089 0.1097195559745686 No Hit GACTAATGTAGGTAAGGGAAGTCGGCAAATTGGATCCGTAACTTCGGAAA 2064 0.10840649283461444 No Hit GTATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTCAAAACCACTT 2063 0.10835397030901628 No Hit ACTAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATGAGTACGACCAG 1998 0.10494000614513549 No Hit GTCAAGGACGCACCGGACTCGACGGAGGTGCCGAGCTCTACCAGCCATTG 1971 0.10352189795398502 No Hit GTATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTCATCACCCGTG 1951 0.1024714474420217 No Hit TATCTACATTGTTCTATCAACTAGAGGCTGTTCACCTTGGAGACCTGCTG 1948 0.10231387986522719 No Hit GTGTATGACCGGGATCCACCTTGCGGCATCACCCAGCCCGCCCGGCTCCA 1944 0.10210378976283453 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 5.252252559816591E-5 0.0 24 0.0 0.0 0.0 5.252252559816591E-5 0.0 25 0.0 0.0 0.0 5.252252559816591E-5 0.0 26 0.0 0.0 0.0 5.252252559816591E-5 0.0 27 0.0 0.0 0.0 5.252252559816591E-5 0.0 28 0.0 0.0 0.0 1.5756757679449775E-4 0.0 29 0.0 0.0 0.0 4.7270273038349324E-4 0.0 30 0.0 0.0 0.0 0.001890810921533973 0.0 31 0.0 0.0 0.0 0.005304775085414757 0.0 32 0.0 0.0 0.0 0.008823784300491874 0.0 33 0.0 0.0 0.0 0.012185225938774491 0.0 34 0.0 0.0 0.0 0.017279910921796586 0.0 35 0.0 0.0 0.0 0.0232674788399875 0.0 36 0.0 0.0 0.0 0.03277405597325553 0.0 37 0.0 0.0 0.0 0.04916108395988329 0.0 38 0.0 0.0 0.0 0.07237604027427263 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1475 0.0 29.831932 1 GTATCAA 3950 0.0 28.40642 1 ATCAACG 6135 0.0 18.14403 3 ATACCGT 355 0.0 17.970802 6 AACGCAG 6195 0.0 17.93279 6 TCAACGC 6235 0.0 17.853027 4 CAACGCA 6325 0.0 17.598993 5 GTCATAC 1035 0.0 17.218214 1 CATACAC 1155 0.0 17.141874 3 TAATACG 105 3.7780366E-5 16.760944 4 AACCGTA 160 2.132765E-8 16.499054 7 TATCAAC 6915 0.0 16.383732 2 TACACCG 1060 0.0 16.187752 5 TAGCGGC 410 0.0 16.099174 30 ATACACC 1090 0.0 15.944041 4 GTATAAT 140 1.586508E-6 15.715035 1 ACGGACC 700 0.0 15.713386 8 TACCGTC 380 0.0 15.630683 7 AAGACGG 720 0.0 15.58244 5 GTATTAG 325 0.0 15.569973 1 >>END_MODULE