##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064205_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1916249 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265014097854714 32.0 32.0 32.0 32.0 32.0 2 31.24271115079512 32.0 32.0 32.0 32.0 32.0 3 31.375211676561868 32.0 32.0 32.0 32.0 32.0 4 31.485185380396807 32.0 32.0 32.0 32.0 32.0 5 31.40235741805997 32.0 32.0 32.0 32.0 32.0 6 34.981290531658466 36.0 36.0 36.0 36.0 36.0 7 35.00382048470736 36.0 36.0 36.0 36.0 36.0 8 34.936047977063524 36.0 36.0 36.0 36.0 36.0 9 35.09287832635529 36.0 36.0 36.0 36.0 36.0 10 34.90234306710662 36.0 36.0 36.0 32.0 36.0 11 35.08668915156642 36.0 36.0 36.0 36.0 36.0 12 34.97503090673498 36.0 36.0 36.0 36.0 36.0 13 35.03205168013134 36.0 36.0 36.0 36.0 36.0 14 34.966638991070575 36.0 36.0 36.0 32.0 36.0 15 34.923856450805715 36.0 36.0 36.0 32.0 36.0 16 34.949127175017445 36.0 36.0 36.0 36.0 36.0 17 34.90594228620602 36.0 36.0 36.0 32.0 36.0 18 34.903220301745755 36.0 36.0 36.0 32.0 36.0 19 34.907752593739126 36.0 36.0 36.0 32.0 36.0 20 34.894280440589924 36.0 36.0 36.0 32.0 36.0 21 34.89519577048703 36.0 36.0 36.0 32.0 36.0 22 34.8781176141514 36.0 36.0 36.0 32.0 36.0 23 34.82808601596139 36.0 36.0 36.0 32.0 36.0 24 34.79348978133844 36.0 36.0 36.0 32.0 36.0 25 34.761623358968485 36.0 36.0 36.0 32.0 36.0 26 34.69713069648047 36.0 36.0 36.0 32.0 36.0 27 34.70468242905802 36.0 36.0 36.0 32.0 36.0 28 34.67277060549021 36.0 36.0 36.0 32.0 36.0 29 34.63966008592829 36.0 36.0 36.0 32.0 36.0 30 34.62345342385045 36.0 36.0 36.0 32.0 36.0 31 34.61775479073962 36.0 36.0 36.0 32.0 36.0 32 34.573538720698615 36.0 36.0 36.0 32.0 36.0 33 34.551229511404834 36.0 36.0 36.0 32.0 36.0 34 34.54382441947784 36.0 36.0 36.0 32.0 36.0 35 34.49875668558731 36.0 36.0 36.0 32.0 36.0 36 34.46715693002319 36.0 36.0 36.0 32.0 36.0 37 34.466240034567534 36.0 36.0 36.0 32.0 36.0 38 34.41608214798808 36.0 36.0 36.0 32.0 36.0 39 34.41409858530911 36.0 36.0 36.0 32.0 36.0 40 34.399614037632894 36.0 36.0 36.0 32.0 36.0 41 34.37632061386594 36.0 36.0 36.0 32.0 36.0 42 34.29976741018521 36.0 36.0 36.0 32.0 36.0 43 34.308155151026824 36.0 36.0 36.0 32.0 36.0 44 34.226864045330224 36.0 36.0 36.0 32.0 36.0 45 34.19777492382253 36.0 36.0 36.0 32.0 36.0 46 34.17080295932313 36.0 36.0 36.0 32.0 36.0 47 34.14671945034283 36.0 36.0 36.0 32.0 36.0 48 34.093274934520515 36.0 36.0 36.0 32.0 36.0 49 34.0715684652673 36.0 36.0 36.0 32.0 36.0 50 33.43321092405006 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 12.0 21 52.0 22 170.0 23 507.0 24 1530.0 25 3318.0 26 7058.0 27 12998.0 28 21970.0 29 35333.0 30 52244.0 31 76983.0 32 113915.0 33 185946.0 34 380369.0 35 1023838.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.35135975817243 18.459497431208366 11.947490600581604 26.241652210037596 2 15.697769687835619 20.512839246146346 37.557260752079344 26.232130313938697 3 18.163491620330387 24.39025281214041 29.29948936592137 28.146766201607832 4 11.777696948569837 16.11507690284509 36.778779793231465 35.32844635535361 5 13.688513340385306 37.40975207292998 33.99370332352424 14.908031263160476 6 34.09651072437055 36.73516354658569 16.401938585033317 12.76638714401044 7 29.678345559475833 30.9324623261382 20.91173954950531 18.47745256488066 8 27.60377174365127 34.09066358286423 19.18571125151272 19.11985342197178 9 26.98413858102036 13.799601507549752 18.524106288311064 40.69215362311883 10 15.102704107485884 27.39171071576369 32.33056731618754 25.17501786056289 11 37.650711181433714 20.95631671892156 22.68224154702314 18.710730552621584 12 24.057637633542214 23.967409228868082 29.613599074858787 22.36135406273092 13 29.258108857041766 19.595426037892995 25.74497531099999 25.401489794065245 14 22.973222616744003 20.078132012415956 25.53620520142529 31.41244016941475 15 24.807623560601513 27.97368702590852 22.461635610712023 24.757053802777946 16 25.306800011689607 26.140102033574227 24.380189872625028 24.172908082111142 17 23.367526871507827 26.420157296885737 25.685492856095426 24.526822975511013 18 24.194987694677714 25.58557260975116 26.76131014630705 23.458129549264083 19 25.17555139000797 25.29688224071206 25.652629513507648 23.874936855772322 20 25.199467078864707 25.074377775957075 25.326382883900738 24.399772261277477 21 26.544410460227247 24.533033024413843 24.82297446730566 24.099582048053254 22 25.26243993470574 24.830449920887066 25.514964660106624 24.39214548430057 23 24.202772624443245 24.572768997539445 25.940711864672128 25.28374651334518 24 24.51938306105462 25.477981562804146 25.659431124053157 24.34320425208808 25 24.683191221880172 24.841889157763283 25.91285234099025 24.562067279366293 26 23.976582245781 25.965463091934726 26.414905281571983 23.64304938071229 27 24.648862367825966 25.255502108678485 25.63981861346496 24.455816910030588 28 23.8873377623071 25.404009038863983 26.25696049932939 24.45169269949952 29 24.03767673035535 24.995929435193474 26.053075990138797 24.913317844312378 30 23.943600229206265 25.590524471108633 26.206124900713817 24.259750398971285 31 24.580870011773843 25.15134814666366 25.36104361331697 24.90673822824553 32 24.165230220223812 25.55142060769643 25.20265506445874 25.08069410762102 33 24.029080866351386 25.051795922499732 25.93282238460599 24.98630082654289 34 24.778622974363685 25.19961506908508 26.130264880063958 23.891497076487276 35 25.10693127591087 25.22304747352029 25.955440604868844 23.714580645699996 36 23.970012238305113 25.686506290071314 25.57591793811958 24.767563533503992 37 24.90301045931867 25.45520111304435 25.39085454126061 24.250933886376373 38 24.232411790831268 25.360015322799086 25.732073342765695 24.67549954360396 39 24.88782287129612 25.08263897804261 25.219265971737315 24.810272178923956 40 25.194629387445815 25.4283725236222 25.743109039424777 23.633889049507204 41 24.115301718514342 25.3948721160219 26.50645290915828 23.98337325630548 42 25.307429449351115 26.046961400930584 25.395415538572973 23.250193611145324 43 24.33747376353311 25.152878627051294 26.001943403335513 24.507704206080074 44 24.04525775692195 25.7216275341505 25.40501528005077 24.82809942887679 45 24.112604671891518 25.958263795606573 25.599224726102243 24.329906806399663 46 24.155253167034143 25.350728646166292 25.236597998669257 25.257420188130308 47 24.488207960722427 25.441392583686113 25.667725006888602 24.402674448702854 48 25.176676877795227 25.704176473351044 24.752454062968045 24.36669258588568 49 24.232064634842573 25.982835153388766 25.20720243059071 24.577897781177953 50 24.444650868607948 26.034806940931322 24.903938833969043 24.61660335649169 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 24.5 2 26.0 3 105.0 4 184.0 5 218.5 6 253.0 7 246.5 8 240.0 9 355.0 10 470.0 11 678.5 12 887.0 13 1732.0 14 2577.0 15 3519.5 16 4462.0 17 4985.5 18 5509.0 19 5788.0 20 6067.0 21 7045.0 22 8023.0 23 8967.5 24 9912.0 25 12496.0 26 15080.0 27 19867.5 28 24655.0 29 28440.0 30 32225.0 31 34526.0 32 36827.0 33 42448.5 34 48070.0 35 55760.0 36 63450.0 37 72676.0 38 81902.0 39 87149.0 40 92396.0 41 98941.0 42 105486.0 43 106004.0 44 106522.0 45 115517.0 46 124512.0 47 130894.0 48 137276.0 49 141211.5 50 145147.0 51 139836.0 52 134525.0 53 131957.5 54 129390.0 55 129770.5 56 130151.0 57 125519.5 58 120888.0 59 109902.0 60 98916.0 61 86786.0 62 74656.0 63 64715.5 64 54775.0 65 46533.5 66 38292.0 67 32706.5 68 27121.0 69 24608.0 70 22095.0 71 17006.5 72 11918.0 73 10092.0 74 8266.0 75 6367.5 76 4469.0 77 3945.0 78 3421.0 79 2782.5 80 2144.0 81 1734.0 82 1324.0 83 1102.5 84 881.0 85 639.0 86 397.0 87 278.0 88 159.0 89 125.5 90 92.0 91 80.0 92 68.0 93 60.0 94 52.0 95 45.0 96 38.0 97 24.5 98 11.0 99 15.0 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009028054287308173 2 7.827792734660266E-4 3 2.0874113959094042E-4 4 0.0 5 0.0 6 3.1311170938641065E-4 7 0.0 8 0.0 9 0.0014090026922388478 10 8.349645583637617E-4 11 5.2185284897735106E-5 12 5.2185284897735106E-5 13 5.740381338750862E-4 14 2.609264244886755E-4 15 0.004383563931409749 16 8.871498432614969E-4 17 0.0 18 2.609264244886755E-4 19 5.2185284897735106E-5 20 9.393351281592318E-4 21 0.0 22 5.2185284897735106E-5 23 7.305939885682914E-4 24 7.305939885682914E-4 25 0.0015655585469320531 26 0.00500978735018257 27 0.0062622341877282125 28 0.004122637506921074 29 0.0027658200995799606 30 0.0037051552277391924 31 0.007149384030989709 32 0.003235487663659577 33 0.003913896367330133 34 0.003183302378761841 35 0.0033920435183527817 36 0.006992828176296504 37 0.003287672948557312 38 0.007827792734660267 39 0.0043313786465120135 40 0.0022439672506026098 41 0.0030789318089663714 42 0.001930855541216199 43 0.0012002615526479075 44 0.0013046321224433777 45 0.0012002615526479075 46 0.0012524468375456426 47 0.0021395966808071395 48 0.002035226111011669 49 3.652969942841457E-4 50 0.0011480762677501723 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1916249.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.7580663224921 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99675915572779 37.559324088759055 2 14.683121551240733 14.905737150381803 3 5.123885059555741 7.8023549304527 4 2.2683728883018004 4.60552886034263 5 1.143043011386972 2.9009326490720513 6 0.689607801980165 2.100189512965033 7 0.42943732417286706 1.5258185727203948 8 0.29647939701666337 1.203897671761941 9 0.2051341232109886 0.9370990287854661 >10 0.9920524055394665 8.930928368392179 >50 0.08109975573547654 2.9101427911404003 >100 0.07749172801340674 8.480278041785654 >500 0.009698358954889604 3.389330954593718 >1k 0.0038174391630948438 2.7484373788471497 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2199 0.1147554414901195 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2100 0.10958909828524373 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2074 0.10823228087790261 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1979 0.10327467881261777 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1935 0.10097852627711744 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.2185284897735106E-5 0.0 5 0.0 0.0 0.0 5.2185284897735106E-5 0.0 6 0.0 0.0 0.0 5.2185284897735106E-5 0.0 7 0.0 0.0 0.0 5.2185284897735106E-5 0.0 8 0.0 0.0 0.0 5.2185284897735106E-5 0.0 9 0.0 0.0 0.0 1.0437056979547021E-4 0.0 10 0.0 0.0 0.0 1.0437056979547021E-4 0.0 11 0.0 0.0 0.0 1.0437056979547021E-4 0.0 12 0.0 0.0 0.0 1.0437056979547021E-4 0.0 13 0.0 0.0 0.0 1.5655585469320532E-4 0.0 14 0.0 0.0 0.0 2.0874113959094042E-4 0.0 15 0.0 0.0 0.0 2.0874113959094042E-4 0.0 16 0.0 0.0 0.0 2.0874113959094042E-4 0.0 17 0.0 0.0 0.0 2.0874113959094042E-4 0.0 18 0.0 0.0 0.0 2.0874113959094042E-4 0.0 19 0.0 0.0 0.0 2.0874113959094042E-4 0.0 20 0.0 0.0 0.0 2.609264244886755E-4 0.0 21 0.0 0.0 0.0 3.1311170938641065E-4 0.0 22 0.0 0.0 0.0 4.1748227918188085E-4 0.0 23 0.0 0.0 0.0 5.740381338750862E-4 0.0 24 0.0 0.0 0.0 7.305939885682914E-4 0.0 25 0.0 0.0 0.0 7.827792734660266E-4 0.0 26 0.0 0.0 0.0 7.827792734660266E-4 0.0 27 0.0 0.0 0.0 8.871498432614968E-4 0.0 28 0.0 0.0 0.0 0.0016177438318297883 0.0 29 0.0 0.0 0.0 0.003966081652227868 0.0 30 0.0 0.0 0.0 0.007932163304455736 0.0 31 0.0 0.0 0.0 0.017325514586048054 0.0 32 0.0 0.0 0.0 0.02974561239170901 0.0 33 0.0 0.0 0.0 0.04190478377288129 0.0 34 0.0 0.0 0.0 0.05672540468383806 0.0 35 0.0 0.0 0.0 0.0743118456943748 0.0 36 0.0 0.0 0.0 0.10076978513752649 0.0 37 0.0 0.0 0.0 0.14215271606143043 0.0 38 0.0 0.0 0.0 0.19804315618690474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 50 0.002582842 21.997274 4 GTATCAA 3310 0.0 21.666685 1 GATATAC 1015 0.0 19.723238 1 CGCAATA 610 0.0 19.479095 36 ATACGAA 635 0.0 19.054247 40 ATACACT 1085 0.0 18.246588 4 ACGTATG 230 0.0 18.177353 32 CGTCGTA 440 0.0 17.999178 10 GTAGAAC 1260 0.0 17.807318 3 CAATACG 685 0.0 17.667114 38 TCTAGCG 700 0.0 17.601034 28 ACCGTCG 425 0.0 17.598278 8 CGGTCCA 690 0.0 17.53543 10 TTAGGAC 440 0.0 17.497831 3 AACGCAG 4075 0.0 17.435875 6 CTAGCGG 695 0.0 17.411095 29 AATACGA 695 0.0 17.410639 39 AATCCCG 685 0.0 17.020676 19 TACGAAT 725 0.0 16.991882 41 TACCGTC 455 0.0 16.920979 7 >>END_MODULE