##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064203_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1026314 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229511630943357 32.0 32.0 32.0 32.0 32.0 2 31.395960690393 32.0 32.0 32.0 32.0 32.0 3 31.46202331839963 32.0 32.0 32.0 32.0 32.0 4 31.54912823950565 32.0 32.0 32.0 32.0 32.0 5 31.50656524221632 32.0 32.0 32.0 32.0 32.0 6 35.05567302014783 36.0 36.0 36.0 36.0 36.0 7 35.08288983683356 36.0 36.0 36.0 36.0 36.0 8 35.031340311054905 36.0 36.0 36.0 36.0 36.0 9 35.11694081928143 36.0 36.0 36.0 36.0 36.0 10 34.99506583755069 36.0 36.0 36.0 36.0 36.0 11 35.121676212153396 36.0 36.0 36.0 36.0 36.0 12 35.04314761369328 36.0 36.0 36.0 36.0 36.0 13 35.07052227680807 36.0 36.0 36.0 36.0 36.0 14 35.02150998622254 36.0 36.0 36.0 36.0 36.0 15 35.00203543944641 36.0 36.0 36.0 36.0 36.0 16 35.003798057904305 36.0 36.0 36.0 36.0 36.0 17 34.96688732688047 36.0 36.0 36.0 36.0 36.0 18 34.963777167611475 36.0 36.0 36.0 36.0 36.0 19 34.96077029057384 36.0 36.0 36.0 36.0 36.0 20 34.95056678560363 36.0 36.0 36.0 36.0 36.0 21 34.94473328825291 36.0 36.0 36.0 36.0 36.0 22 34.93499455332384 36.0 36.0 36.0 36.0 36.0 23 34.88433851628254 36.0 36.0 36.0 32.0 36.0 24 34.8656580734551 36.0 36.0 36.0 32.0 36.0 25 34.83621776571303 36.0 36.0 36.0 32.0 36.0 26 34.7801842321161 36.0 36.0 36.0 32.0 36.0 27 34.78097736170412 36.0 36.0 36.0 32.0 36.0 28 34.751197976447756 36.0 36.0 36.0 32.0 36.0 29 34.71359350062456 36.0 36.0 36.0 32.0 36.0 30 34.70428640747374 36.0 36.0 36.0 32.0 36.0 31 34.68689114637431 36.0 36.0 36.0 32.0 36.0 32 34.63886978059347 36.0 36.0 36.0 32.0 36.0 33 34.59991484087716 36.0 36.0 36.0 32.0 36.0 34 34.573067306886585 36.0 36.0 36.0 32.0 36.0 35 34.52561886518161 36.0 36.0 36.0 32.0 36.0 36 34.49957517874647 36.0 36.0 36.0 32.0 36.0 37 34.48213802013809 36.0 36.0 36.0 32.0 36.0 38 34.4359279908488 36.0 36.0 36.0 32.0 36.0 39 34.43191654795706 36.0 36.0 36.0 32.0 36.0 40 34.39147570821405 36.0 36.0 36.0 32.0 36.0 41 34.361477091806215 36.0 36.0 36.0 32.0 36.0 42 34.29215522734758 36.0 36.0 36.0 32.0 36.0 43 34.27261637276701 36.0 36.0 36.0 32.0 36.0 44 34.19644572713614 36.0 36.0 36.0 32.0 36.0 45 34.144726662600334 36.0 36.0 36.0 32.0 36.0 46 34.100934022141374 36.0 36.0 36.0 32.0 36.0 47 34.04287771578679 36.0 36.0 36.0 32.0 36.0 48 33.97424277560279 36.0 36.0 36.0 32.0 36.0 49 33.93616183741038 36.0 36.0 36.0 32.0 36.0 50 33.35247205046409 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 4.0 20 18.0 21 50.0 22 203.0 23 515.0 24 1151.0 25 2520.0 26 5035.0 27 8752.0 28 14189.0 29 20872.0 30 28460.0 31 38988.0 32 54052.0 33 83204.0 34 167114.0 35 601183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.71677086906358 18.340336462003805 12.088484985500015 25.8544076834326 2 15.427097634147934 21.380556186185277 37.75522234488376 25.437123834783026 3 18.208418305952094 25.630729866482966 29.072669005788693 27.088182821776247 4 11.986195257981477 16.628926429923006 36.73485892231812 34.6500193897774 5 13.689572586947074 37.621624571037714 33.518299467804205 15.17050337421101 6 32.48362586888613 36.79185902170291 17.385614928764493 13.338900180646467 7 28.64772116081659 31.308900217477724 21.512756354792696 18.530622266912985 8 27.371545160642846 33.32420682169395 20.100865816894245 19.203382200768964 9 27.618619824145675 14.089879801696185 18.914668558243953 39.376831815914194 10 15.43801836492891 27.665194718134202 32.26129879645797 24.63548812047892 11 36.70420232424221 21.711992345415094 22.918057161898954 18.66574816844374 12 24.328153302160256 24.336143067465773 29.757296263420614 21.578407366953357 13 29.440588671465086 20.212099451335902 25.78779726613083 24.559514611068185 14 23.48106618650079 19.963130120275316 26.529359493019665 30.026444200204228 15 24.51216921730759 27.469360153876437 23.527835537739286 24.490635091076687 16 24.606721757287524 26.281948224170304 24.989160184700708 24.122169833841465 17 22.979419553859735 25.922281095259347 26.330343345214036 24.767956005666882 18 23.69359774961001 25.813520463095497 27.40621507515753 23.086666712136964 19 24.94869991055369 24.936910146407435 26.757600500431643 23.356789442607234 20 25.066914806027444 24.883441082329327 26.37149775164303 23.678146360000195 21 26.44970252768646 24.382206615129483 25.738321800150832 23.42976905703323 22 24.897058794871747 24.77009959914802 26.395528074254077 23.937313531726158 23 24.16769624713049 24.473452413895245 26.510949929261002 24.847901409713263 24 24.02760956474207 25.415882710016753 26.639878165585284 23.916629559655895 25 24.381902261924946 24.848922433532692 26.69264362843396 24.076531676108406 26 23.830330006986593 25.75744140566002 27.071934643669042 23.340293943684344 27 24.16167679257877 25.223119235660103 26.66234671058081 23.95285726118032 28 23.651688404067176 25.52683761016891 26.881945696287023 23.93952828947689 29 23.582544166237128 25.186764403537783 26.767209753939664 24.46348167628543 30 23.59696064980824 25.831943188550404 26.749341305229024 23.821754856412337 31 24.101933966263022 25.55072775870587 25.994584075935972 24.352754199095138 32 23.895019414685002 25.7842607073084 26.01899082613504 24.301729051871558 33 24.057458675511658 25.104943348131286 26.402557616529016 24.435040359828037 34 24.299830359343925 25.391045584714604 26.608248959599017 23.700875096342447 35 24.721395880449432 25.44478732350038 26.35526276044382 23.478554035606372 36 23.842250864079155 26.09650597279186 25.992144114858455 24.069099048270527 37 24.349250398040297 25.88362997160613 26.020045250896928 23.747074379456638 38 23.912736315596124 25.862312577285834 26.238936371529388 23.98601473558866 39 24.222626272074958 25.57752495430079 25.99700275559401 24.20284601803024 40 24.80938605012818 25.95146201508542 25.91034299305556 23.328808941730838 41 23.607306870434304 25.971311559272586 26.78318605197283 23.63819551832028 42 24.671050067426943 26.403103977799773 25.85267797984207 23.07316797493121 43 24.03395881524152 25.603477339028863 26.17786967188995 24.18469417383967 44 23.72522157350316 26.224890285063957 25.573811064254365 24.476077077178513 45 23.789799638895953 26.29862505687925 25.8312164997072 24.0803588045176 46 23.684302835428237 26.027282471012374 25.579265322030597 24.709149371528795 47 23.87050129787118 26.056615245504222 25.904125125694733 24.16875833092987 48 24.7026451355794 26.04767226704888 25.036465981161438 24.213216616210286 49 23.983837273655574 26.435723249849946 25.315985782101347 24.26445369439313 50 24.11003378144661 26.51750993614946 25.11363603146439 24.258820250939536 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 36.0 2 32.0 3 100.5 4 169.0 5 211.5 6 254.0 7 273.5 8 293.0 9 405.5 10 518.0 11 831.5 12 1145.0 13 2025.0 14 2905.0 15 4079.5 16 5254.0 17 5721.0 18 6188.0 19 6268.0 20 6348.0 21 6756.0 22 7164.0 23 7832.5 24 8501.0 25 8873.0 26 9245.0 27 11445.5 28 13646.0 29 15388.0 30 17130.0 31 19224.0 32 21318.0 33 24353.5 34 27389.0 35 30792.5 36 34196.0 37 38365.5 38 42535.0 39 45434.5 40 48334.0 41 51798.5 42 55263.0 43 56016.0 44 56769.0 45 61197.5 46 65626.0 47 68779.0 48 71932.0 49 73889.0 50 75846.0 51 73318.5 52 70791.0 53 69132.5 54 67474.0 55 67619.5 56 67765.0 57 65239.5 58 62714.0 59 56563.0 60 50412.0 61 44233.0 62 38054.0 63 32928.5 64 27803.0 65 23615.5 66 19428.0 67 16738.0 68 14048.0 69 12607.0 70 11166.0 71 8808.0 72 6450.0 73 5554.0 74 4658.0 75 3663.5 76 2669.0 77 2336.0 78 2003.0 79 1612.0 80 1221.0 81 996.5 82 772.0 83 600.0 84 428.0 85 311.0 86 194.0 87 140.0 88 86.0 89 63.0 90 40.0 91 35.5 92 31.0 93 28.0 94 25.0 95 24.0 96 23.0 97 19.0 98 15.0 99 9.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010328223136389059 2 2.923082019732752E-4 3 2.923082019732752E-4 4 0.0 5 0.0 6 0.0 7 1.9487213464885013E-4 8 0.0 9 9.743606732442508E-4 10 9.743606732442508E-4 11 9.743606732442507E-5 12 9.743606732442507E-5 13 2.923082019732752E-4 14 1.9487213464885013E-4 15 0.0035076984236793026 16 4.871803366221254E-4 17 0.0 18 2.923082019732752E-4 19 0.0 20 8.769246059198257E-4 21 0.0 22 0.0 23 5.846164039465504E-4 24 2.923082019732752E-4 25 0.0019487213464885016 26 0.006138472241438779 27 0.006723088645385331 28 0.004774367298896829 29 0.002046157413812927 30 0.004092314827625854 31 0.007892321453278431 32 0.0028256459524083274 33 0.004482059096923553 34 0.002630773817759477 35 0.0036051344910037275 36 0.0075025771839807315 37 0.0035076984236793026 38 0.008866682126522682 39 0.0037025705583281533 40 0.002435901683110627 41 0.004579495164247978 42 0.0017538492118396513 43 0.0011692328078931008 44 0.0017538492118396513 45 0.0016564131445152264 46 0.001364104942541951 47 0.0017538492118396513 48 0.0014615410098663762 49 1.9487213464885013E-4 50 0.001071796740568676 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1026314.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.06914225537603 #Duplication Level Percentage of deduplicated Percentage of total 1 77.44045056925732 46.51781441565133 2 14.081008667749058 16.916682255244023 3 4.282410101549835 7.717221047575691 4 1.6816909231249135 4.040709251630603 5 0.7752895909825737 2.3285490364922254 6 0.43975524728743204 1.5849432304114088 7 0.26293813234418495 1.1056127653302015 8 0.1749771793202266 0.8408583260824906 9 0.12801841147418688 0.6920960553135175 >10 0.6061617327680097 6.652521178267494 >50 0.06284156162415275 2.6925430211555046 >100 0.060204317392160575 7.034136182636084 >500 0.003926367808504869 1.6165795161968046 >1k 3.2719731737540573E-4 0.2597337180126538 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1334 0.12997971381078305 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1309 0.1275438121276724 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9487213464885016E-4 2 0.0 0.0 0.0 0.0 1.9487213464885016E-4 3 0.0 0.0 0.0 0.0 1.9487213464885016E-4 4 0.0 0.0 0.0 0.0 1.9487213464885016E-4 5 0.0 0.0 0.0 0.0 1.9487213464885016E-4 6 0.0 0.0 0.0 0.0 1.9487213464885016E-4 7 0.0 0.0 0.0 0.0 1.9487213464885016E-4 8 0.0 0.0 0.0 0.0 1.9487213464885016E-4 9 0.0 0.0 0.0 0.0 1.9487213464885016E-4 10 0.0 0.0 0.0 9.743606732442508E-5 1.9487213464885016E-4 11 0.0 0.0 0.0 9.743606732442508E-5 2.9230820197327526E-4 12 0.0 0.0 0.0 1.9487213464885016E-4 6.820524712709755E-4 13 0.0 0.0 0.0 1.9487213464885016E-4 6.820524712709755E-4 14 0.0 0.0 0.0 1.9487213464885016E-4 6.820524712709755E-4 15 0.0 0.0 0.0 1.9487213464885016E-4 6.820524712709755E-4 16 0.0 0.0 0.0 1.9487213464885016E-4 7.794885385954006E-4 17 0.0 0.0 0.0 1.9487213464885016E-4 7.794885385954006E-4 18 0.0 0.0 0.0 1.9487213464885016E-4 8.769246059198257E-4 19 0.0 0.0 0.0 1.9487213464885016E-4 8.769246059198257E-4 20 0.0 9.743606732442508E-5 0.0 2.9230820197327526E-4 8.769246059198257E-4 21 0.0 9.743606732442508E-5 0.0 3.897442692977003E-4 8.769246059198257E-4 22 0.0 9.743606732442508E-5 0.0 6.820524712709755E-4 8.769246059198257E-4 23 0.0 9.743606732442508E-5 0.0 0.001364104942541951 8.769246059198257E-4 24 0.0 9.743606732442508E-5 0.0 0.002338465615786202 8.769246059198257E-4 25 0.0 9.743606732442508E-5 0.0 0.002630773817759477 8.769246059198257E-4 26 0.0 9.743606732442508E-5 0.0 0.0030205180870571773 8.769246059198257E-4 27 0.0 9.743606732442508E-5 0.0 0.0038000066256525782 8.769246059198257E-4 28 0.0 9.743606732442508E-5 0.0 0.0060410361741143545 8.769246059198257E-4 29 0.0 9.743606732442508E-5 0.0 0.013738485492743936 8.769246059198257E-4 30 0.0 9.743606732442508E-5 0.0 0.027282098850839022 8.769246059198257E-4 31 0.0 9.743606732442508E-5 0.0 0.05563599444224672 8.769246059198257E-4 32 0.0 9.743606732442508E-5 0.0 0.0823334768891392 8.769246059198257E-4 33 0.0 9.743606732442508E-5 0.0 0.10864121506673396 8.769246059198257E-4 34 0.0 9.743606732442508E-5 0.0 0.14108742548576753 8.769246059198257E-4 35 0.0 9.743606732442508E-5 0.0 0.17372850803944992 8.769246059198257E-4 36 0.0 9.743606732442508E-5 0.0 0.22273884990363574 8.769246059198257E-4 37 0.0 9.743606732442508E-5 0.0 0.29474410365638587 8.769246059198257E-4 38 0.0 9.743606732442508E-5 0.0 0.3982212071549253 8.769246059198257E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTGC 45 0.0013987285 24.442469 41 GCACCGT 65 4.9341546E-4 20.306051 6 TATACCG 55 0.004485255 19.998384 5 TAGGACG 100 1.1239681E-6 19.7984 4 ATAGTAC 80 8.992466E-5 19.248444 3 ATTACAC 175 9.094947E-12 18.855618 3 CGCAATA 235 0.0 18.724628 36 ATACCGT 200 0.0 18.698488 6 AATCACG 95 1.5958287E-5 18.527525 34 CGTATGT 205 0.0 18.245985 33 GTATCAA 3160 0.0 18.031065 1 ACGTATG 175 1.9099389E-10 17.602007 32 GATATAC 475 0.0 17.599434 1 ATACGAA 280 0.0 17.284317 40 AACGCAG 3315 0.0 17.253508 6 TATGGCG 180 2.8558134E-10 17.110561 16 CTAGCGG 275 0.0 16.80028 29 GTATAGT 105 3.7744874E-5 16.761366 1 CGAATGC 290 0.0 16.688307 43 GGCGTTA 240 0.0 16.498667 42 >>END_MODULE