##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064202_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1538641 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.200530208151218 32.0 32.0 32.0 32.0 32.0 2 30.806252400657463 32.0 32.0 32.0 32.0 32.0 3 30.8256441886054 32.0 32.0 32.0 32.0 32.0 4 30.853820351855955 32.0 32.0 32.0 32.0 32.0 5 30.76558469454538 32.0 32.0 32.0 32.0 32.0 6 34.4058737548265 36.0 36.0 36.0 32.0 36.0 7 34.34477048252322 36.0 36.0 36.0 32.0 36.0 8 34.29849523053136 36.0 36.0 36.0 32.0 36.0 9 34.43030570483953 36.0 36.0 36.0 32.0 36.0 10 34.13552089148801 36.0 36.0 36.0 32.0 36.0 11 34.41922839700749 36.0 36.0 36.0 32.0 36.0 12 34.234432203483465 36.0 36.0 36.0 32.0 36.0 13 34.315475149823776 36.0 36.0 36.0 32.0 36.0 14 34.21984010565168 36.0 36.0 36.0 32.0 36.0 15 34.16143856819102 36.0 36.0 36.0 32.0 36.0 16 34.15417436556026 36.0 36.0 36.0 32.0 36.0 17 34.089871516487605 36.0 36.0 36.0 32.0 36.0 18 34.0720200488613 36.0 36.0 36.0 32.0 36.0 19 34.097343694858 36.0 36.0 36.0 32.0 36.0 20 34.07087683221752 36.0 36.0 36.0 32.0 36.0 21 34.061727199522174 36.0 36.0 36.0 32.0 36.0 22 34.052388438888606 36.0 36.0 36.0 32.0 36.0 23 33.987611795084106 36.0 36.0 36.0 32.0 36.0 24 33.98349452536362 36.0 36.0 36.0 32.0 36.0 25 33.582968346742355 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 11.0 5 19.0 6 57.0 7 20.0 8 102.0 9 101.0 10 147.0 11 34.0 12 107.0 13 85.0 14 146.0 15 277.0 16 472.0 17 644.0 18 860.0 19 1061.0 20 1707.0 21 2466.0 22 3942.0 23 5938.0 24 8973.0 25 12741.0 26 17857.0 27 23764.0 28 32174.0 29 42967.0 30 56085.0 31 75536.0 32 105696.0 33 147892.0 34 312903.0 35 683857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.75698922074553 16.86632463117187 11.169294566420922 26.207391581661675 2 16.678690834594246 19.7697469335122 37.32334222471805 26.2282200071755 3 18.80123513518959 23.966198215670307 28.48018707709586 28.752379572044244 4 12.739985740107281 15.432531663916297 35.78472631600157 36.04275627997486 5 14.562158964975966 36.65196634416954 33.777311238434464 15.008563452420029 6 34.03618177729071 35.40112346550498 17.00752833688885 13.555166420315459 7 30.009933081712596 30.376377987562847 21.149598191243026 18.464090739481527 8 28.138045730476385 32.81043677942707 19.603549576457695 19.44796791363885 9 27.610169590715522 14.026721217989191 18.351703872671386 40.0114053186239 10 15.664989328592219 26.959448650434336 32.19338073580039 25.18218128517305 11 36.99904864029694 20.988633755126646 22.62649409968403 19.385823504892382 12 24.67762704368976 23.594032490927773 29.143438731579153 22.58490173380331 13 29.7858475601944 19.577366137653538 25.030777625235505 25.606008676916552 14 23.476036651472178 19.40649796861251 25.57759757130993 31.539867808605383 15 25.078476524675153 26.958856645646385 22.48158150925948 25.481085320418984 16 25.53703335167344 25.567405083460475 23.931038609169793 24.964522955696296 17 23.99680037459029 25.699170178450654 25.350463035221892 24.953566411737164 18 24.538621542832388 25.083221785570725 26.1119978562016 24.266158815395283 19 25.52188482111266 24.881691364705393 25.441559826836226 24.154863987345724 20 25.834512795429237 24.35860244148654 25.095874657869267 24.711010105214957 21 26.338913467379694 24.299144443042437 24.60991311745599 24.752028972121877 22 25.68723141175866 24.365421152216317 25.010195539719675 24.937151896305345 23 24.684820519091595 24.275487225653027 25.35583311326167 25.683859141993704 24 24.721798545007527 24.882842861463512 25.380220037529313 25.01513855599965 25 24.876255494516215 24.541413594789265 25.34502114551313 25.237309765181386 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 272.0 1 272.0 2 454.0 3 636.0 4 636.0 5 636.0 6 1861.5 7 3087.0 8 3087.0 9 3087.0 10 3195.5 11 3304.0 12 3304.0 13 3304.0 14 3832.5 15 4361.0 16 4361.0 17 4361.0 18 7327.5 19 10294.0 20 10294.0 21 10294.0 22 15972.5 23 21651.0 24 21651.0 25 21651.0 26 31514.5 27 41378.0 28 41378.0 29 41378.0 30 52997.5 31 64617.0 32 64617.0 33 64617.0 34 79249.5 35 93882.0 36 93882.0 37 93882.0 38 109386.0 39 124890.0 40 124890.0 41 124890.0 42 142962.5 43 161035.0 44 161035.0 45 161035.0 46 180426.5 47 199818.0 48 199818.0 49 199818.0 50 206132.5 51 212447.0 52 212447.0 53 212447.0 54 199997.0 55 187547.0 56 187547.0 57 187547.0 58 171441.5 59 155336.0 60 155336.0 61 155336.0 62 134284.0 63 113232.0 64 113232.0 65 113232.0 66 92083.0 67 70934.0 68 70934.0 69 70934.0 70 53237.5 71 35541.0 72 35541.0 73 35541.0 74 26521.0 75 17501.0 76 17501.0 77 17501.0 78 13581.0 79 9661.0 80 9661.0 81 9661.0 82 6611.5 83 3562.0 84 3562.0 85 3562.0 86 2680.0 87 1798.0 88 1798.0 89 1798.0 90 1264.0 91 730.0 92 730.0 93 730.0 94 518.0 95 306.0 96 306.0 97 306.0 98 563.5 99 821.0 100 821.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038605496668813584 2 0.00474444656030874 3 0.0015598180472247913 4 0.0038995451180619785 5 0.008189044747930155 6 0.012153582284626499 7 0.022552369266125107 8 0.035225890899826535 9 0.04952422299938712 10 0.057648275328682906 11 0.05472361649013643 12 0.06375756268031334 13 0.06486243379709758 14 0.06642225184432236 15 0.05979302514361699 16 0.0667472139374942 17 0.06245771430762601 18 0.07688603124445532 19 0.0738963799872745 20 0.07909577347802378 21 0.075586182871768 22 0.07825087203577703 23 0.08208542473520464 24 0.07643108431401477 25 0.07792590994260519 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1538641.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.602927692723945 #Duplication Level Percentage of deduplicated Percentage of total 1 76.62531840460545 43.37217357087832 2 13.837099824732718 15.664407217126982 3 4.2205479123930205 7.166861049265773 4 1.823986357228763 4.129718715629385 5 0.9760096134868412 2.762250078979956 6 0.57871318568668 1.965411636254944 7 0.3717217346450505 1.4728376927549398 8 0.2694029898555414 1.2199198363997483 9 0.19290503002355194 0.9827090519387266 >10 0.9837006911490457 9.717043943284578 >50 0.06033125780923413 2.376511570133416 >100 0.054721689076712696 6.348704249254097 >500 0.004386869868354105 1.7150357388497086 >1k 0.0011544394390405539 1.1064156492495338 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3853 0.2504157889982134 No Hit TATCAACGCAGAGTACTTTTTTTTT 2596 0.16872031877481491 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2173 0.14122852569247799 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.299848372687326E-4 2 0.0 0.0 0.0 0.0 1.299848372687326E-4 3 0.0 0.0 0.0 0.0 1.299848372687326E-4 4 0.0 0.0 0.0 6.49924186343663E-5 1.299848372687326E-4 5 0.0 6.49924186343663E-5 0.0 6.49924186343663E-5 1.299848372687326E-4 6 0.0 6.49924186343663E-5 0.0 6.49924186343663E-5 2.599696745374652E-4 7 0.0 6.49924186343663E-5 0.0 6.49924186343663E-5 2.599696745374652E-4 8 0.0 6.49924186343663E-5 0.0 6.49924186343663E-5 2.599696745374652E-4 9 0.0 6.49924186343663E-5 0.0 6.49924186343663E-5 2.599696745374652E-4 10 6.49924186343663E-5 6.49924186343663E-5 0.0 6.49924186343663E-5 2.599696745374652E-4 11 6.49924186343663E-5 6.49924186343663E-5 0.0 1.299848372687326E-4 2.599696745374652E-4 12 6.49924186343663E-5 6.49924186343663E-5 0.0 1.299848372687326E-4 2.599696745374652E-4 13 6.49924186343663E-5 6.49924186343663E-5 0.0 1.299848372687326E-4 5.849317677092968E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 100 4.0017767E-11 15.197867 1 TACGCAC 60 2.5661113E-5 14.251245 9 TAACGAA 95 4.8949005E-9 14.001222 13 CGTTATT 115 3.783498E-10 13.2133875 2 AATCCCG 60 4.0878466E-4 12.668184 19 AACGAAC 105 1.9908839E-8 12.667772 14 AACCGCG 120 7.403287E-10 12.666948 7 TAACCAG 215 0.0 12.369953 5 AATAACG 225 0.0 12.240735 2 ACGCACG 70 1.0896659E-4 12.21575 10 AACGCCG 210 0.0 12.212174 5 CGAGCCG 180 0.0 12.140344 15 CGATAAC 110 3.806963E-8 12.092359 10 ACGCCGC 220 0.0 12.090392 6 CGCATCG 215 0.0 11.931273 13 TAACGCC 225 0.0 11.819794 4 ATAACGC 250 0.0 11.776432 3 AGAACCG 195 0.0 11.690287 5 GTATTAG 220 0.0 11.657455 1 CCGTCGT 180 0.0 11.612124 9 >>END_MODULE